PMC:7212949 / 51368-52178
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T284 | 605-614 | Body_part | denotes | cytokines | http://purl.org/sig/ont/fma/fma84050 |
| T285 | 651-656 | Body_part | denotes | urine | http://purl.org/sig/ont/fma/fma12274 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T161 | 651-656 | Body_part | denotes | urine | http://purl.obolibrary.org/obo/UBERON_0001088 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T387 | 260-263 | Disease | denotes | AKI | http://purl.obolibrary.org/obo/MONDO_0002492 |
| T388 | 421-432 | Disease | denotes | proteinuria | http://purl.obolibrary.org/obo/MONDO_0003634 |
| T389 | 466-469 | Disease | denotes | AKI | http://purl.obolibrary.org/obo/MONDO_0002492 |
| T390 | 509-512 | Disease | denotes | AKI | http://purl.obolibrary.org/obo/MONDO_0002492 |
| T391 | 657-660 | Disease | denotes | AKI | http://purl.obolibrary.org/obo/MONDO_0002492 |
| T392 | 779-782 | Disease | denotes | AKI | http://purl.obolibrary.org/obo/MONDO_0002492 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T526 | 181-186 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | males |
| T527 | 181-186 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | males |
| T528 | 591-596 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T97202 | 68-70 | Chemical | denotes | Cr | http://purl.obolibrary.org/obo/CHEBI_28073 |
| T48861 | 99-101 | Chemical | denotes | Cr | http://purl.obolibrary.org/obo/CHEBI_28073 |
| T96705 | 106-110 | Chemical | denotes | urea | http://purl.obolibrary.org/obo/CHEBI_16199 |
| T56050 | 150-152 | Chemical | denotes | Cr | http://purl.obolibrary.org/obo/CHEBI_28073 |
| T71302 | 347-349 | Chemical | denotes | Cr | http://purl.obolibrary.org/obo/CHEBI_28073 |
| T17251 | 456-458 | Chemical | denotes | Cr | http://purl.obolibrary.org/obo/CHEBI_28073 |
| T83463 | 460-464 | Chemical | denotes | Urea | http://purl.obolibrary.org/obo/CHEBI_16199 |
| T46727 | 708-710 | Chemical | denotes | Cr | http://purl.obolibrary.org/obo/CHEBI_28073 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T66 | 633-647 | http://purl.obolibrary.org/obo/GO_0019076 | denotes | viral shedding |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T282 | 421-432 | Phenotype | denotes | proteinuria | http://purl.obolibrary.org/obo/HP_0000093 |
| T283 | 434-443 | Phenotype | denotes | hematuria | http://purl.obolibrary.org/obo/HP_0000790 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T525 | 0-96 | Sentence | denotes | Key study findings and message • ICU patients more likely to have ↑ Cr (P = 0.04), ↑ BUN (0.001) |
| T526 | 97-257 | Sentence | denotes | • Cr and urea increased with disease progression • ↑ Cr at admission more common in males, older patients, more severe disease (P < 0.001, P < 0.001, P = 0.026) |
| T527 | 258-383 | Sentence | denotes | • AKI, in hospital death, mechanical ventilation more common in patients with baseline ↑ Cr (P < 0.001, P < 0.001, P = 0.012) |
| T528 | 384-521 | Sentence | denotes | • Higher in hospital death rate with proteinuria, hematuria, baseline ↑ Cr, Urea, AKI Stage 2 or 3 (P < 0.001; P = 0.003 for AKI stage 1) |
| T529 | 522-629 | Sentence | denotes | • Renal features may be due to direct viral effect, immune mediated, virus induced cytokines and mediators. |
| T530 | 630-744 | Sentence | denotes | No viral shedding in urine AKI associated with severe outcome (P < 0.001) • ↑ Cr associated with in-hospital death |
| T531 | 745-756 | Sentence | denotes | (P = 0.045) |
| T532 | 757-810 | Sentence | denotes | • Higher incidence of AKI in nonsurvivors (P < 0.001) |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1296 | 38-52 | GO:0042052 | denotes | atients more l |
| T1297 | 65-71 | UBERON:0000055 | denotes | ↑ Cr |
| T1298 | 96-103 | CHEBI:17234;CHEBI:17234 | denotes | • Cr a |
| T1299 | 106-114 | SP_10 | denotes | urea inc |
| T1300 | 130-138 | SP_10 | denotes | ase prog |
| T1301 | 174-181 | CHEBI:17234;CHEBI:17234 | denotes | mon in |
| T1302 | 251-256 | UBERON:0001021;GO:0007268 | denotes | 0.026 |
| T1303 | 257-267 | GO:0006812 | denotes | • AKI, in |
| T1304 | 430-435 | NCBITaxon:10239 | denotes | ia, h |
| T1305 | 489-494 | NCBITaxon:10239 | denotes | .001; |
| T1306 | 592-604 | UBERON:0000970 | denotes | irus induced |
| T1307 | 662-672 | UBERON:0001004 | denotes | ssociated |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1177 | 37-45 | Species | denotes | patients | Tax:9606 |
| 1178 | 194-202 | Species | denotes | patients | Tax:9606 |
| 1179 | 322-330 | Species | denotes | patients | Tax:9606 |
| 1182 | 106-110 | Chemical | denotes | urea | MESH:D014508 |
| 1183 | 460-464 | Chemical | denotes | Urea | MESH:D014508 |
| 1190 | 277-282 | Disease | denotes | death | MESH:D003643 |
| 1191 | 405-410 | Disease | denotes | death | MESH:D003643 |
| 1192 | 421-432 | Disease | denotes | proteinuria | MESH:D011507 |
| 1193 | 434-443 | Disease | denotes | hematuria | MESH:D006417 |
| 1194 | 739-744 | Disease | denotes | death | MESH:D003643 |