PMC:7211620 / 661-1774 JSON TXT

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Id	Subject	Object	Predicate	Lexical cue	fma_id
T1	211-216	Body_part	denotes	lungs	http://purl.org/sig/ont/fma/fma68877
T2	664-687	Body_part	denotes	lower respiratory tract	http://purl.org/sig/ont/fma/fma45662

Id	Subject	Object	Predicate	Lexical cue	uberon_id
T1	664-687	Body_part	denotes	lower respiratory tract	http://purl.obolibrary.org/obo/UBERON_0001558
T2	670-687	Body_part	denotes	respiratory tract	http://purl.obolibrary.org/obo/UBERON_0000065

Id	Subject	Object	Predicate	Lexical cue	mondo_id
T10	280-290	Disease	denotes	infections	http://purl.obolibrary.org/obo/MONDO_0005550
T11	365-378	Disease	denotes	aspergillosis	http://purl.obolibrary.org/obo/MONDO_0005657
T12	393-402	Disease	denotes	influenza	http://purl.obolibrary.org/obo/MONDO_0005812
T13	557-566	Disease	denotes	influenza	http://purl.obolibrary.org/obo/MONDO_0005812
T14	586-633	Disease	denotes	severe acute respiratory syndrome coronavirus 2	http://purl.obolibrary.org/obo/MONDO_0100096
T15	586-619	Disease	denotes	severe acute respiratory syndrome	http://purl.obolibrary.org/obo/MONDO_0005091
T16	635-643	Disease	denotes	SARS-CoV	http://purl.obolibrary.org/obo/MONDO_0005091
T17	670-698	Disease	denotes	respiratory tract infections	http://purl.obolibrary.org/obo/MONDO_0024355
T18	710-745	Disease	denotes	acute respiratory distress syndrome	http://purl.obolibrary.org/obo/MONDO_0006502
T19	716-745	Disease	denotes	respiratory distress syndrome	http://purl.obolibrary.org/obo/MONDO_0009971
T20	747-751	Disease	denotes	ARDS	http://purl.obolibrary.org/obo/MONDO_0006502
T21	786-810	Disease	denotes	coronavirus disease 2019	http://purl.obolibrary.org/obo/MONDO_0100096
T22	812-820	Disease	denotes	COVID-19	http://purl.obolibrary.org/obo/MONDO_0100096
T23	854-858	Disease	denotes	ARDS	http://purl.obolibrary.org/obo/MONDO_0006502
T24	1029-1037	Disease	denotes	COVID-19	http://purl.obolibrary.org/obo/MONDO_0100096
T25	1102-1111	Disease	denotes	influenza	http://purl.obolibrary.org/obo/MONDO_0005812

Id	Subject	Object	Predicate	Lexical cue
T3	211-216	http://www.ebi.ac.uk/efo/EFO_0000934	denotes	lungs
T4	503-504	http://purl.obolibrary.org/obo/CLO_0001020	denotes	a
T5	664-687	http://purl.obolibrary.org/obo/UBERON_0001558	denotes	lower respiratory tract
T6	908-909	http://purl.obolibrary.org/obo/CLO_0001020	denotes	a

Id	Subject	Object	Predicate	Lexical cue	chebi_id
T7	380-383	Chemical	denotes	IPA	http://purl.obolibrary.org/obo/CHEBI_17824\|http://purl.obolibrary.org/obo/CHEBI_30802
T9	461-464	Chemical	denotes	IPA	http://purl.obolibrary.org/obo/CHEBI_17824\|http://purl.obolibrary.org/obo/CHEBI_30802
T11	1062-1065	Chemical	denotes	IPA	http://purl.obolibrary.org/obo/CHEBI_17824\|http://purl.obolibrary.org/obo/CHEBI_30802

Id	Subject	Object	Predicate	Lexical cue
T11	0-159	Sentence	denotes	Aspergillus is an opportunistic fungal pathogen that may cause devastating disease in immunocompromised hosts, including those with hematological malignancies.
T12	160-246	Sentence	denotes	Aspergillus is an air-borne pathogen, bringing the lungs in the frontline for defense.
T13	247-385	Sentence	denotes	Recently, severe viral pulmonary infections have shown to be associated with an increased risk for invasive pulmonary aspergillosis (IPA).
T14	386-545	Sentence	denotes	Severe influenza in critically ill patients for example, is complicated by IPA in 7–23% of cases and associated with a case fatality rate of more than 50% [1].
T15	546-753	Sentence	denotes	Similar to influenza, the newly emerged severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) may cause severe lower respiratory tract infections leading to acute respiratory distress syndrome (ARDS).
T16	754-884	Sentence	denotes	The proportion of patients with coronavirus disease 2019 (COVID-19) who develop severe disease with ARDS is considerably high [2].
T17	885-983	Sentence	denotes	Consequently, there is a large number of patients in need for intensive care unit (ICU) admission.
T18	984-1112	Sentence	denotes	It is not yet known, if patients with severe COVID-19 are at similar risk for IPA development as patients with severe influenza.

Id	Subject	Object	Predicate	Lexical cue	hp_id
T7	270-290	Phenotype	denotes	pulmonary infections	http://purl.obolibrary.org/obo/HP_0006532
T8	346-378	Phenotype	denotes	invasive pulmonary aspergillosis	http://purl.obolibrary.org/obo/HP_0020103
T9	380-383	Phenotype	denotes	IPA	http://purl.obolibrary.org/obo/HP_0020103
T10	461-464	Phenotype	denotes	IPA	http://purl.obolibrary.org/obo/HP_0020103
T11	664-698	Phenotype	denotes	lower respiratory tract infections	http://purl.obolibrary.org/obo/HP_0002783
T12	716-736	Phenotype	denotes	respiratory distress	http://purl.obolibrary.org/obo/HP_0002098
T13	1062-1065	Phenotype	denotes	IPA	http://purl.obolibrary.org/obo/HP_0020103

Id	Subject	Object	Predicate	Lexical cue	tao:has_database_id
61	421-429	Species	denotes	patients	Tax:9606
62	586-633	Species	denotes	severe acute respiratory syndrome coronavirus 2	Tax:2697049
63	635-645	Species	denotes	SARS-CoV-2	Tax:2697049
64	772-780	Species	denotes	patients	Tax:9606
65	926-934	Species	denotes	patients	Tax:9606
66	1008-1016	Species	denotes	patients	Tax:9606
67	1081-1089	Species	denotes	patients	Tax:9606
68	0-11	Species	denotes	Aspergillus	Tax:746128
69	160-171	Species	denotes	Aspergillus	Tax:746128
70	393-402	Species	denotes	influenza	Tax:11308
71	557-566	Species	denotes	influenza	Tax:11308
72	1102-1111	Species	denotes	influenza	Tax:11308
73	146-158	Disease	denotes	malignancies	MESH:D009369
74	264-290	Disease	denotes	viral pulmonary infections	MESH:D001102
75	346-378	Disease	denotes	invasive pulmonary aspergillosis	MESH:D055744
76	406-420	Disease	denotes	critically ill	MESH:D016638
77	670-698	Disease	denotes	respiratory tract infections	MESH:D012141
78	710-745	Disease	denotes	acute respiratory distress syndrome	MESH:D012128
79	747-751	Disease	denotes	ARDS	MESH:D012128
80	786-810	Disease	denotes	coronavirus disease 2019	MESH:C000657245
81	812-820	Disease	denotes	COVID-19	MESH:C000657245
82	854-858	Disease	denotes	ARDS	MESH:D012128
83	1029-1037	Disease	denotes	COVID-19	MESH:C000657245