PMC:7205724 / 7094-7826 JSONTXT

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    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"256","span":{"begin":7,"end":16},"obj":"Species"},{"id":"257","span":{"begin":111,"end":116},"obj":"Species"},{"id":"266","span":{"begin":180,"end":184},"obj":"Gene"},{"id":"267","span":{"begin":260,"end":264},"obj":"Gene"},{"id":"268","span":{"begin":139,"end":147},"obj":"Species"},{"id":"269","span":{"begin":174,"end":179},"obj":"Species"},{"id":"270","span":{"begin":192,"end":202},"obj":"Species"},{"id":"271","span":{"begin":254,"end":259},"obj":"Species"},{"id":"272","span":{"begin":468,"end":476},"obj":"Species"},{"id":"273","span":{"begin":718,"end":728},"obj":"Species"}],"attributes":[{"id":"A256","pred":"tao:has_database_id","subj":"256","obj":"Tax:2697049"},{"id":"A257","pred":"tao:has_database_id","subj":"257","obj":"Tax:9606"},{"id":"A266","pred":"tao:has_database_id","subj":"266","obj":"Gene:59272"},{"id":"A267","pred":"tao:has_database_id","subj":"267","obj":"Gene:59272"},{"id":"A268","pred":"tao:has_database_id","subj":"268","obj":"Tax:694009"},{"id":"A269","pred":"tao:has_database_id","subj":"269","obj":"Tax:9606"},{"id":"A270","pred":"tao:has_database_id","subj":"270","obj":"Tax:2697049"},{"id":"A271","pred":"tao:has_database_id","subj":"271","obj":"Tax:9606"},{"id":"A272","pred":"tao:has_database_id","subj":"272","obj":"Tax:694009"},{"id":"A273","pred":"tao:has_database_id","subj":"273","obj":"Tax:2697049"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T54","span":{"begin":54,"end":65},"obj":"Body_part"}],"attributes":[{"id":"A54","pred":"fma_id","subj":"T54","obj":"http://purl.org/sig/ont/fma/fma82739"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-PD-MONDO

    {"project":"LitCovid-PD-MONDO","denotations":[{"id":"T48","span":{"begin":7,"end":11},"obj":"Disease"},{"id":"T49","span":{"begin":139,"end":147},"obj":"Disease"},{"id":"T50","span":{"begin":192,"end":200},"obj":"Disease"},{"id":"T51","span":{"begin":468,"end":476},"obj":"Disease"},{"id":"T52","span":{"begin":718,"end":726},"obj":"Disease"}],"attributes":[{"id":"A48","pred":"mondo_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A49","pred":"mondo_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A50","pred":"mondo_id","subj":"T50","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A51","pred":"mondo_id","subj":"T51","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A52","pred":"mondo_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T81","span":{"begin":111,"end":116},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T82","span":{"begin":174,"end":179},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T83","span":{"begin":213,"end":214},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T84","span":{"begin":254,"end":259},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T85","span":{"begin":368,"end":371},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T104","span":{"begin":54,"end":65},"obj":"Chemical"},{"id":"T105","span":{"begin":54,"end":59},"obj":"Chemical"},{"id":"T106","span":{"begin":60,"end":65},"obj":"Chemical"}],"attributes":[{"id":"A104","pred":"chebi_id","subj":"T104","obj":"http://purl.obolibrary.org/obo/CHEBI_33709"},{"id":"A105","pred":"chebi_id","subj":"T105","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"id":"A106","pred":"chebi_id","subj":"T106","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-sample-CHEBI

    {"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T73","span":{"begin":54,"end":65},"obj":"Chemical"}],"attributes":[{"id":"A73","pred":"chebi_id","subj":"T73","obj":"http://purl.obolibrary.org/obo/CHEBI_33709"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-sample-PD-NCBITaxon

    {"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T63","span":{"begin":7,"end":16},"obj":"Species"},{"id":"T64","span":{"begin":111,"end":116},"obj":"Species"},{"id":"T65","span":{"begin":139,"end":147},"obj":"Species"},{"id":"T66","span":{"begin":174,"end":179},"obj":"Species"},{"id":"T67","span":{"begin":192,"end":202},"obj":"Species"},{"id":"T68","span":{"begin":254,"end":259},"obj":"Species"},{"id":"T69","span":{"begin":468,"end":476},"obj":"Species"},{"id":"T70","span":{"begin":718,"end":728},"obj":"Species"}],"attributes":[{"id":"A65","pred":"ncbi_taxonomy_id","subj":"T65","obj":"NCBItxid:694009"},{"id":"A63","pred":"ncbi_taxonomy_id","subj":"T63","obj":"NCBItxid:2697049"},{"id":"A66","pred":"ncbi_taxonomy_id","subj":"T66","obj":"NCBItxid:9606"},{"id":"A69","pred":"ncbi_taxonomy_id","subj":"T69","obj":"NCBItxid:694009"},{"id":"A70","pred":"ncbi_taxonomy_id","subj":"T70","obj":"NCBItxid:2697049"},{"id":"A64","pred":"ncbi_taxonomy_id","subj":"T64","obj":"NCBItxid:9606"},{"id":"A67","pred":"ncbi_taxonomy_id","subj":"T67","obj":"NCBItxid:2697049"},{"id":"A68","pred":"ncbi_taxonomy_id","subj":"T68","obj":"NCBItxid:9606"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-sample-sentences

    {"project":"LitCovid-sample-sentences","denotations":[{"id":"T65","span":{"begin":0,"end":121},"obj":"Sentence"},{"id":"T66","span":{"begin":122,"end":347},"obj":"Sentence"},{"id":"T67","span":{"begin":348,"end":732},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-sample-Pubtator

    {"project":"LitCovid-sample-Pubtator","denotations":[{"id":"256","span":{"begin":7,"end":16},"obj":"Species"},{"id":"257","span":{"begin":111,"end":116},"obj":"Species"},{"id":"268","span":{"begin":139,"end":147},"obj":"Species"},{"id":"269","span":{"begin":174,"end":179},"obj":"Species"},{"id":"266","span":{"begin":180,"end":184},"obj":"Gene"},{"id":"270","span":{"begin":192,"end":202},"obj":"Species"},{"id":"271","span":{"begin":254,"end":259},"obj":"Species"},{"id":"267","span":{"begin":260,"end":264},"obj":"Gene"},{"id":"272","span":{"begin":468,"end":476},"obj":"Species"},{"id":"273","span":{"begin":718,"end":728},"obj":"Species"}],"attributes":[{"id":"A268","pred":"pubann:denotes","subj":"268","obj":"Tax:694009"},{"id":"A256","pred":"pubann:denotes","subj":"256","obj":"Tax:2697049"},{"id":"A269","pred":"pubann:denotes","subj":"269","obj":"Tax:9606"},{"id":"A272","pred":"pubann:denotes","subj":"272","obj":"Tax:694009"},{"id":"A273","pred":"pubann:denotes","subj":"273","obj":"Tax:2697049"},{"id":"A257","pred":"pubann:denotes","subj":"257","obj":"Tax:9606"},{"id":"A267","pred":"pubann:denotes","subj":"267","obj":"Gene:59272"},{"id":"A271","pred":"pubann:denotes","subj":"271","obj":"Tax:9606"},{"id":"A270","pred":"pubann:denotes","subj":"270","obj":"Tax:2697049"},{"id":"A266","pred":"pubann:denotes","subj":"266","obj":"Gene:59272"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-sample-Enju

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SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-sample-PD-FMA

    {"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T54","span":{"begin":54,"end":65},"obj":"Body_part"}],"attributes":[{"id":"A54","pred":"fma_id","subj":"T54","obj":"http://purl.org/sig/ont/fma/fma82739"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-sample-PD-MONDO

    {"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T47","span":{"begin":7,"end":16},"obj":"Disease"},{"id":"T48","span":{"begin":139,"end":147},"obj":"Disease"},{"id":"T49","span":{"begin":192,"end":202},"obj":"Disease"},{"id":"T50","span":{"begin":468,"end":476},"obj":"Disease"},{"id":"T51","span":{"begin":718,"end":728},"obj":"Disease"}],"attributes":[{"id":"A48","pred":"mondo_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A49","pred":"mondo_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A47","pred":"mondo_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A51","pred":"mondo_id","subj":"T51","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A50","pred":"mondo_id","subj":"T50","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T65","span":{"begin":0,"end":121},"obj":"Sentence"},{"id":"T66","span":{"begin":122,"end":347},"obj":"Sentence"},{"id":"T67","span":{"begin":348,"end":732},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"3.1.3 SARS-CoV2 receptor binding domain contains six amino acids providing favorable positions for binding to human ACE2\nWhen compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3]. Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB."}