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PMC:7205724 / 3490-3874 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
118 65-78 Species denotes coronaviruses Tax:11118

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T16 53-60 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T17 223-230 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T26 114-116 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T27 117-119 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T28 117-119 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T29 120-128 http://purl.obolibrary.org/obo/UBERON_0007651 denotes junction
T30 140-142 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T31 140-142 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T32 145-146 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T33 180-187 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T34 347-349 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T35 347-349 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T16 53-60 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T17 117-119 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T18 140-142 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T19 180-187 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T20 223-230 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T21 347-349 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T10 103-108 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T11 53-60 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T12 180-187 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T13 223-230 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T35 62-192 Sentence denotes In coronaviruses, cleavage occurs at two sites: the S1/S2 junction and at the S2′, a region close to the viral fusion peptide [2].

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
118 65-78 Species denotes coronaviruses Tax:11118

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T368 51-60 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T401 180-190 Protein denotes peptide [2 https://www.uniprot.org/uniprot/P15230
T402 221-230 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T559 4-8 WDT denotes that
T560 9-12 MD denotes can
T561 13-18 VB denotes carry
T562 19-22 RP denotes out
T563 23-34 JJ denotes proteolytic
T564 35-43 NN denotes cleavage
T565 44-46 IN denotes of
T566 47-50 DT denotes the
T567 51-52 NN denotes S
T568 53-60 NN denotes protein
T569 62-64 IN denotes In
T570 65-78 NNS denotes coronaviruses
T571 78-79 -COMMA- denotes ,
T572 80-88 NN denotes cleavage
T573 89-95 VBZ denotes occurs
T574 96-98 IN denotes at
T575 99-102 CD denotes two
T576 103-108 NNS denotes sites
T577 108-109 -COLON- denotes :
T578 110-113 DT denotes the
T579 114-119 NN denotes S1/S2
T580 120-128 NN denotes junction
T581 129-132 CC denotes and
T582 133-135 IN denotes at
T583 136-139 DT denotes the
T584 140-143 NN denotes S2′
T585 143-144 -COMMA- denotes ,
T586 145-146 DT denotes a
T587 147-153 NN denotes region
T588 154-159 JJ denotes close
T589 160-162 TO denotes to
T590 163-166 DT denotes the
T591 167-172 JJ denotes viral
T592 173-179 NN denotes fusion
T593 180-187 NN denotes peptide
T594 188-189 -LRB- denotes [
T595 189-190 CD denotes 2
T596 190-191 -RRB- denotes ]
T597 193-204 JJ denotes Proteolytic
T598 205-213 NN denotes cleavage
T599 214-216 IN denotes of
T600 217-220 DT denotes the
T601 221-222 NN denotes S
T602 223-230 NN denotes protein
T603 231-237 VBZ denotes causes
T604 238-252 JJ denotes conformational
T605 253-260 NNS denotes changes
T606 261-263 IN denotes so
T607 264-268 IN denotes that
T608 269-273 PRP denotes they
T609 274-277 MD denotes can
T610 277-280 RB denotes not
T611 281-287 VB denotes revert
T612 288-290 TO denotes to
T613 291-294 DT denotes the
T614 295-303 JJ denotes original
T615 304-313 NN denotes structure
T616 314-317 CC denotes and
T617 318-326 JJ denotes profound
T618 327-333 RB denotes enough
T619 334-336 TO denotes to
T620 337-342 VB denotes prime
T621 343-346 DT denotes the
T622 347-349 NN denotes S2
T623 350-357 NN denotes subunit
T624 358-361 IN denotes for
T625 362-365 DT denotes the
T626 366-372 NN denotes fusion
T627 373-375 IN denotes of
T628 376-381 JJ denotes viral
R555 T561 T560 arg2Of carry,can
R557 T564 T561 arg2Of cleavage,carry
R558 T561 T562 arg1Of carry,out
R559 T564 T563 arg1Of cleavage,proteolytic
R560 T564 T565 arg1Of cleavage,of
R561 T568 T565 arg2Of protein,of
R562 T568 T566 arg1Of protein,the
R563 T568 T567 arg1Of protein,S
R564 T573 T569 arg1Of occurs,In
R565 T570 T569 arg2Of coronaviruses,In
R566 T573 T571 arg1Of occurs,","
R567 T572 T573 arg1Of cleavage,occurs
R568 T573 T574 arg1Of occurs,at
R569 T576 T574 arg2Of sites,at
R570 T576 T575 arg1Of sites,two
R571 T576 T577 arg1Of sites,:
R572 T580 T577 arg2Of junction,:
R573 T580 T578 arg1Of junction,the
R574 T580 T579 arg1Of junction,S1/S2
R575 T574 T581 arg1Of at,and
R576 T582 T581 arg2Of at,and
R577 T573 T582 arg1Of occurs,at
R578 T584 T582 arg2Of S2′,at
R579 T584 T583 arg1Of S2′,the
R580 T584 T585 arg1Of S2′,","
R581 T587 T585 arg2Of region,","
R582 T587 T586 arg1Of region,a
R583 T587 T588 arg1Of region,close
R584 T588 T589 arg1Of close,to
R585 T593 T589 arg2Of peptide,to
R586 T593 T590 arg1Of peptide,the
R587 T593 T591 arg1Of peptide,viral
R588 T593 T592 arg1Of peptide,fusion
R589 T593 T594 arg1Of peptide,[
R590 T595 T594 arg2Of 2,[
R591 T596 T594 arg3Of ],[
R592 T598 T597 arg1Of cleavage,Proteolytic
R593 T598 T599 arg1Of cleavage,of
R594 T602 T599 arg2Of protein,of
R595 T602 T600 arg1Of protein,the
R596 T602 T601 arg1Of protein,S
R597 T598 T603 arg1Of cleavage,causes
R598 T605 T603 arg2Of changes,causes
R599 T605 T604 arg1Of changes,conformational
R600 T603 T606 arg1Of causes,so
R601 T611 T606 arg2Of revert,so
R602 T606 T607 arg1Of so,that
R603 T608 T609 arg1Of they,can
R604 T611 T609 arg2Of revert,can
R605 T611 T610 arg1Of revert,not
R606 T608 T611 arg1Of they,revert
R607 T611 T612 arg1Of revert,to
R608 T615 T612 arg2Of structure,to
R609 T615 T613 arg1Of structure,the
R610 T615 T614 arg1Of structure,original
R611 T615 T616 arg1Of structure,and
R612 T615 T617 arg1Of structure,profound
R613 T620 T617 arg2Of prime,profound
R614 T617 T618 arg1Of profound,enough
R615 T620 T619 arg1Of prime,to
R616 T623 T620 arg2Of subunit,prime
R617 T623 T621 arg1Of subunit,the
R618 T623 T622 arg1Of subunit,S2
R619 T623 T624 arg1Of subunit,for
R620 T626 T624 arg2Of fusion,for
R621 T626 T625 arg1Of fusion,the
R622 T626 T627 arg1Of fusion,of

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T16 53-60 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T17 223-230 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T35 62-192 Sentence denotes In coronaviruses, cleavage occurs at two sites: the S1/S2 junction and at the S2′, a region close to the viral fusion peptide [2].

2_test

Id Subject Object Predicate Lexical cue
32413736-26935699-48112965 189-190 26935699 denotes 2
T3678 189-190 26935699 denotes 2