PMC:7205724 / 2420-2958
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
98 | 224-232 | Species | denotes | patients | Tax:9606 |
99 | 270-278 | Species | denotes | patients | Tax:9606 |
100 | 246-265 | Chemical | denotes | lopinavir-ritonavir | MESH:C558899 |
101 | 91-99 | Disease | denotes | COVID-19 | MESH:C000657245 |
102 | 173-181 | Disease | denotes | COVID-19 | MESH:C000657245 |
103 | 337-342 | Disease | denotes | death | MESH:D003643 |
104 | 455-463 | Disease | denotes | COVID-19 | MESH:C000657245 |
105 | 529-537 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T23 | 91-99 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T24 | 173-181 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T25 | 455-463 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T26 | 529-537 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13 | 101-102 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T14 | 362-367 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T15 | 368-372 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T9 | 37-54 | Chemical | denotes | anti-viral agents | http://purl.obolibrary.org/obo/CHEBI_22587 |
T10 | 246-265 | Chemical | denotes | lopinavir-ritonavir | http://purl.obolibrary.org/obo/CHEBI_145924 |
T11 | 246-255 | Chemical | denotes | lopinavir | http://purl.obolibrary.org/obo/CHEBI_31781 |
T12 | 256-265 | Chemical | denotes | ritonavir | http://purl.obolibrary.org/obo/CHEBI_45409 |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4 | 362-367 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T8 | 246-265 | Chemical | denotes | lopinavir-ritonavir | http://purl.obolibrary.org/obo/CHEBI_145924 |
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T25 | 91-99 | Species | denotes | COVID-19 | NCBItxid:2697049 |
T26 | 173-181 | Species | denotes | COVID-19 | NCBItxid:2697049 |
T27 | 421-431 | Species | denotes | indicators | NCBItxid:189528 |
T28 | 455-463 | Species | denotes | COVID-19 | NCBItxid:2697049 |
T29 | 529-537 | Species | denotes | COVID-19 | NCBItxid:2697049 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T28 | 393-538 | Sentence | denotes | Here we review intermediate indicators of the pathogenesis of COVID-19 that have the potential of being considered for the treatment of COVID-19. |
T26 | 0-100 | Sentence | denotes | Moreover, most of the best available anti-viral agents are not helpful in the treatment of COVID-19. |
T27 | 101-392 | Sentence | denotes | A randomized controlled trial of 199 hospitalized adults with confirmed COVID-19 demonstrated no actual difference between patients who received lopinavir-ritonavir and patients who received standard care alone in clinical improvement, death rate, and positive virus test rate at day 28 [1]. |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
101 | 91-99 | Disease | denotes | COVID-19 | MESH:C000657245 |
102 | 173-181 | Disease | denotes | COVID-19 | MESH:C000657245 |
98 | 224-232 | Species | denotes | patients | Tax:9606 |
100 | 246-265 | Chemical | denotes | lopinavir-ritonavir | MESH:C558899 |
99 | 270-278 | Species | denotes | patients | Tax:9606 |
103 | 337-342 | Disease | denotes | death | MESH:D003643 |
104 | 455-463 | Disease | denotes | COVID-19 | MESH:C000657245 |
105 | 529-537 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T377 | 0-8 | RB | denotes | Moreover |
T378 | 8-9 | -COMMA- | denotes | , |
T379 | 10-14 | JJS | denotes | most |
T380 | 15-17 | IN | denotes | of |
T381 | 18-21 | DT | denotes | the |
T382 | 22-26 | JJS | denotes | best |
T383 | 27-36 | JJ | denotes | available |
T384 | 37-47 | JJ | denotes | anti-viral |
T385 | 48-54 | NNS | denotes | agents |
T386 | 55-58 | VBP | denotes | are |
T387 | 59-62 | RB | denotes | not |
T388 | 63-70 | JJ | denotes | helpful |
T389 | 71-73 | IN | denotes | in |
T390 | 74-77 | DT | denotes | the |
T391 | 78-87 | NN | denotes | treatment |
T392 | 88-90 | IN | denotes | of |
T393 | 91-99 | NN | denotes | COVID-19 |
T394 | 101-102 | DT | denotes | A |
T395 | 103-113 | VBN | denotes | randomized |
T396 | 114-124 | VBN | denotes | controlled |
T397 | 125-130 | NN | denotes | trial |
T398 | 131-133 | IN | denotes | of |
T399 | 134-137 | CD | denotes | 199 |
T400 | 138-150 | VBN | denotes | hospitalized |
T401 | 151-157 | NNS | denotes | adults |
T402 | 158-162 | IN | denotes | with |
T403 | 163-172 | VBN | denotes | confirmed |
T404 | 173-181 | NN | denotes | COVID-19 |
T405 | 182-194 | VBD | denotes | demonstrated |
T406 | 195-197 | DT | denotes | no |
T407 | 198-204 | JJ | denotes | actual |
T408 | 205-215 | NN | denotes | difference |
T409 | 216-223 | IN | denotes | between |
T410 | 224-232 | NNS | denotes | patients |
T411 | 233-236 | WP | denotes | who |
T412 | 237-245 | VBD | denotes | received |
T413 | 246-265 | NN | denotes | lopinavir-ritonavir |
T414 | 266-269 | CC | denotes | and |
T415 | 270-278 | NNS | denotes | patients |
T416 | 279-282 | WP | denotes | who |
T417 | 283-291 | VBD | denotes | received |
T418 | 292-300 | JJ | denotes | standard |
T419 | 301-305 | NN | denotes | care |
T420 | 306-311 | RB | denotes | alone |
T421 | 312-314 | IN | denotes | in |
T422 | 315-323 | JJ | denotes | clinical |
T423 | 324-335 | NN | denotes | improvement |
T424 | 335-336 | -COMMA- | denotes | , |
T425 | 337-342 | NN | denotes | death |
T426 | 343-347 | NN | denotes | rate |
T427 | 347-348 | -COMMA- | denotes | , |
T428 | 349-352 | CC | denotes | and |
T429 | 353-361 | JJ | denotes | positive |
T430 | 362-367 | NN | denotes | virus |
T431 | 368-372 | NN | denotes | test |
T432 | 373-377 | NN | denotes | rate |
T433 | 378-380 | IN | denotes | at |
T434 | 381-384 | NN | denotes | day |
T435 | 385-387 | CD | denotes | 28 |
T436 | 388-389 | -LRB- | denotes | [ |
T437 | 389-390 | CD | denotes | 1 |
T438 | 390-391 | -RRB- | denotes | ] |
T439 | 393-397 | RB | denotes | Here |
T440 | 398-400 | PRP | denotes | we |
T441 | 401-407 | VBP | denotes | review |
T442 | 408-420 | JJ | denotes | intermediate |
T443 | 421-431 | NNS | denotes | indicators |
T444 | 432-434 | IN | denotes | of |
T445 | 435-438 | DT | denotes | the |
T446 | 439-451 | NN | denotes | pathogenesis |
T447 | 452-454 | IN | denotes | of |
T448 | 455-463 | NN | denotes | COVID-19 |
T449 | 464-468 | WDT | denotes | that |
T450 | 469-473 | VBP | denotes | have |
T451 | 474-477 | DT | denotes | the |
T452 | 478-487 | NN | denotes | potential |
T453 | 488-490 | IN | denotes | of |
T454 | 491-496 | VBG | denotes | being |
T455 | 497-507 | VBN | denotes | considered |
T456 | 508-511 | IN | denotes | for |
T457 | 512-515 | DT | denotes | the |
T458 | 516-525 | NN | denotes | treatment |
T459 | 526-528 | IN | denotes | of |
T460 | 529-537 | NN | denotes | COVID-19 |
R454 | T458 | T456 | arg2Of | treatment,for |
R455 | T458 | T457 | arg1Of | treatment,the |
R456 | T458 | T459 | arg1Of | treatment,of |
R457 | T460 | T459 | arg2Of | COVID-19,of |
R376 | T386 | T377 | arg1Of | are,Moreover |
R377 | T386 | T378 | arg1Of | are,"," |
R378 | T379 | T380 | arg1Of | most,of |
R379 | T385 | T380 | arg2Of | agents,of |
R380 | T385 | T381 | arg1Of | agents,the |
R381 | T383 | T382 | arg1Of | available,best |
R382 | T385 | T383 | arg1Of | agents,available |
R383 | T385 | T384 | arg1Of | agents,anti-viral |
R384 | T379 | T386 | arg1Of | most,are |
R385 | T388 | T386 | arg2Of | helpful,are |
R386 | T386 | T387 | arg1Of | are,not |
R387 | T379 | T388 | arg1Of | most,helpful |
R388 | T386 | T389 | arg1Of | are,in |
R389 | T391 | T389 | arg2Of | treatment,in |
R390 | T391 | T390 | arg1Of | treatment,the |
R391 | T391 | T392 | arg1Of | treatment,of |
R392 | T393 | T392 | arg2Of | COVID-19,of |
R393 | T397 | T394 | arg1Of | trial,A |
R394 | T397 | T395 | arg2Of | trial,randomized |
R395 | T397 | T396 | arg2Of | trial,controlled |
R396 | T397 | T398 | arg1Of | trial,of |
R397 | T401 | T398 | arg2Of | adults,of |
R398 | T401 | T399 | arg1Of | adults,199 |
R399 | T401 | T400 | arg2Of | adults,hospitalized |
R400 | T401 | T402 | arg1Of | adults,with |
R401 | T404 | T402 | arg2Of | COVID-19,with |
R402 | T404 | T403 | arg2Of | COVID-19,confirmed |
R403 | T397 | T405 | arg1Of | trial,demonstrated |
R404 | T408 | T405 | arg2Of | difference,demonstrated |
R405 | T408 | T406 | arg1Of | difference,no |
R406 | T408 | T407 | arg1Of | difference,actual |
R407 | T408 | T409 | arg1Of | difference,between |
R408 | T410 | T409 | arg2Of | patients,between |
R409 | T410 | T411 | arg1Of | patients,who |
R410 | T410 | T412 | arg1Of | patients,received |
R411 | T414 | T412 | arg2Of | and,received |
R412 | T413 | T414 | arg1Of | lopinavir-ritonavir,and |
R413 | T415 | T414 | arg2Of | patients,and |
R414 | T410 | T416 | arg1Of | patients,who |
R415 | T410 | T417 | arg1Of | patients,received |
R416 | T419 | T417 | arg2Of | care,received |
R417 | T419 | T418 | arg1Of | care,standard |
R418 | T419 | T420 | arg1Of | care,alone |
R419 | T417 | T421 | arg1Of | received,in |
R420 | T428 | T421 | arg2Of | and,in |
R421 | T423 | T422 | arg1Of | improvement,clinical |
R422 | T423 | T424 | arg1Of | improvement,"," |
R423 | T426 | T424 | arg2Of | rate,"," |
R424 | T426 | T425 | arg1Of | rate,death |
R425 | T428 | T427 | arg1Of | and,"," |
R426 | T424 | T428 | arg1Of | ",",and |
R427 | T432 | T428 | arg2Of | rate,and |
R428 | T432 | T429 | arg1Of | rate,positive |
R429 | T432 | T430 | arg1Of | rate,virus |
R430 | T432 | T431 | arg1Of | rate,test |
R431 | T432 | T433 | arg1Of | rate,at |
R432 | T434 | T433 | arg2Of | day,at |
R433 | T434 | T435 | arg1Of | day,28 |
R434 | T417 | T436 | arg1Of | received,[ |
R435 | T437 | T436 | arg2Of | 1,[ |
R436 | T438 | T436 | arg3Of | ],[ |
R437 | T441 | T439 | arg1Of | review,Here |
R438 | T440 | T441 | arg1Of | we,review |
R439 | T443 | T441 | arg2Of | indicators,review |
R440 | T443 | T442 | arg1Of | indicators,intermediate |
R441 | T443 | T444 | arg1Of | indicators,of |
R442 | T446 | T444 | arg2Of | pathogenesis,of |
R443 | T446 | T445 | arg1Of | pathogenesis,the |
R444 | T446 | T447 | arg1Of | pathogenesis,of |
R445 | T448 | T447 | arg2Of | COVID-19,of |
R446 | T443 | T449 | arg1Of | indicators,that |
R447 | T443 | T450 | arg1Of | indicators,have |
R448 | T452 | T450 | arg2Of | potential,have |
R449 | T452 | T451 | arg1Of | potential,the |
R450 | T452 | T453 | arg1Of | potential,of |
R451 | T455 | T453 | arg2Of | considered,of |
R452 | T455 | T454 | arg2Of | considered,being |
R453 | T455 | T456 | arg1Of | considered,for |
LitCovid-sample-PD-GO-BP-0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3 | 337-342 | http://purl.obolibrary.org/obo/GO_0016265 | denotes | death |
T4 | 439-451 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
LitCovid-sample-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T23 | 91-99 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T24 | 173-181 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T25 | 455-463 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T26 | 529-537 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-sample-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2 | 439-451 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2 | 439-451 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T26 | 0-100 | Sentence | denotes | Moreover, most of the best available anti-viral agents are not helpful in the treatment of COVID-19. |
T27 | 101-392 | Sentence | denotes | A randomized controlled trial of 199 hospitalized adults with confirmed COVID-19 demonstrated no actual difference between patients who received lopinavir-ritonavir and patients who received standard care alone in clinical improvement, death rate, and positive virus test rate at day 28 [1]. |
T28 | 393-538 | Sentence | denotes | Here we review intermediate indicators of the pathogenesis of COVID-19 that have the potential of being considered for the treatment of COVID-19. |