PMC:7205724 / 19731-20478
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
665 | 62-71 | Species | denotes | SARS-CoV2 | Tax:2697049 |
679 | 214-218 | Gene | denotes | ACE2 | Gene:103231639 |
680 | 112-121 | Species | denotes | SARS-CoV2 | Tax:2697049 |
681 | 247-256 | Species | denotes | SARS-CoV2 | Tax:2697049 |
682 | 325-333 | Species | denotes | SARS-CoV | Tax:694009 |
683 | 407-416 | Species | denotes | SARS-CoV2 | Tax:2697049 |
684 | 475-483 | Species | denotes | SARS-CoV | Tax:694009 |
685 | 584-593 | Species | denotes | SARS-CoV2 | Tax:2697049 |
686 | 598-606 | Species | denotes | SARS-CoV | Tax:694009 |
687 | 101-110 | Disease | denotes | infection | MESH:D007239 |
688 | 257-266 | Disease | denotes | infection | MESH:D007239 |
689 | 455-464 | Disease | denotes | infection | MESH:D007239 |
690 | 545-554 | Disease | denotes | infection | MESH:D007239 |
691 | 190-192 | CellLine | denotes | E6 | CVCL:4582 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T147 | 193-198 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T148 | 683-691 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T139 | 62-66 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T140 | 101-110 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T141 | 112-116 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T142 | 247-251 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T143 | 257-266 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T144 | 325-333 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T145 | 407-411 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T146 | 455-464 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T147 | 475-483 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T148 | 545-554 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T149 | 584-588 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T150 | 598-606 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T233 | 90-92 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
T234 | 185-198 | http://purl.obolibrary.org/obo/CLO_0051719 | denotes | Vero E6 cells |
T235 | 444-446 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
T236 | 534-536 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
T237 | 701-708 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T166 | 683-691 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T84 | 72-83 | http://purl.obolibrary.org/obo/IDO_0000608 | denotes | replication |
T85 | 101-110 | http://purl.obolibrary.org/obo/IDO_0000586 | denotes | infection |
T86 | 122-133 | http://purl.obolibrary.org/obo/IDO_0000608 | denotes | replication |
T87 | 193-198 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cells |
T88 | 232-243 | http://purl.obolibrary.org/obo/IDO_0000467 | denotes | susceptible |
T89 | 257-266 | http://purl.obolibrary.org/obo/IDO_0000586 | denotes | infection |
T90 | 300-311 | http://purl.obolibrary.org/obo/IDO_0000608 | denotes | replication |
T91 | 417-428 | http://purl.obolibrary.org/obo/IDO_0000608 | denotes | replication |
T92 | 455-464 | http://purl.obolibrary.org/obo/IDO_0000586 | denotes | infection |
T93 | 545-554 | http://purl.obolibrary.org/obo/IDO_0000586 | denotes | infection |
T94 | 701-708 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T108 | 683-691 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T186 | 62-71 | Species | denotes | SARS-CoV2 | NCBItxid:2697049 |
T187 | 112-121 | Species | denotes | SARS-CoV2 | NCBItxid:2697049 |
T188 | 247-256 | Species | denotes | SARS-CoV2 | NCBItxid:2697049 |
T189 | 325-333 | Species | denotes | SARS-CoV | NCBItxid:694009 |
T190 | 407-416 | Species | denotes | SARS-CoV2 | NCBItxid:2697049 |
T191 | 475-483 | Species | denotes | SARS-CoV | NCBItxid:694009 |
T192 | 584-593 | Species | denotes | SARS-CoV2 | NCBItxid:2697049 |
T193 | 598-606 | Species | denotes | SARS-CoV | NCBItxid:694009 |
T194 | 701-708 | Species | denotes | viruses | NCBItxid:10239 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T157 | 0-14 | Sentence | denotes | 5.2 Rational: |
T158 | 15-83 | Sentence | denotes | Recombinant type I IFN can effectively inhibit SARS-CoV2 replication |
T159 | 84-272 | Sentence | denotes | In 24–48 h after infection, SARS-CoV2 replication reaches titer that causes the cytopathic effect in Vero E6 cells, which express ACE2 and thus are susceptible to SARS-CoV2 infection [25]. |
T160 | 273-339 | Sentence | denotes | It is similar to the viral replication kinetics for SARS-CoV [25]. |
T161 | 340-470 | Sentence | denotes | Pretreatment with recombinant type I IFN could effectively inhibit SARS-CoV2 replication at both 24 and 48 h after infection [25]. |
T162 | 471-560 | Sentence | denotes | For SARS-CoV, such an effect was present at 24 h but absent at 48 h after infection [25]. |
T163 | 561-747 | Sentence | denotes | The difference between SARS-CoV2 and SARS-CoV in response to type I IFN treatment may be due to differences in structural proteins of these viruses, including NSP3, ORF3b, and ORF6 [25]. |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
665 | 62-71 | Species | denotes | SARS-CoV2 | Tax:2697049 |
687 | 101-110 | Disease | denotes | infection | MESH:D007239 |
680 | 112-121 | Species | denotes | SARS-CoV2 | Tax:2697049 |
691 | 190-192 | CellLine | denotes | E6 | CVCL:4582 |
679 | 214-218 | Gene | denotes | ACE2 | Gene:103231639 |
681 | 247-256 | Species | denotes | SARS-CoV2 | Tax:2697049 |
688 | 257-266 | Disease | denotes | infection | MESH:D007239 |
682 | 325-333 | Species | denotes | SARS-CoV | Tax:694009 |
683 | 407-416 | Species | denotes | SARS-CoV2 | Tax:2697049 |
689 | 455-464 | Disease | denotes | infection | MESH:D007239 |
684 | 475-483 | Species | denotes | SARS-CoV | Tax:694009 |
690 | 545-554 | Disease | denotes | infection | MESH:D007239 |
685 | 584-593 | Species | denotes | SARS-CoV2 | Tax:2697049 |
686 | 598-606 | Species | denotes | SARS-CoV | Tax:694009 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T1989 | 672-691 | Protein | denotes | structural proteins | https://www.uniprot.org/uniprot/Q6LEG6|https://www.uniprot.org/uniprot/Q04766|https://www.uniprot.org/uniprot/Q04765 |
T1992 | 720-724 | Protein | denotes | NSP3 | https://www.uniprot.org/uniprot/Q9QNA7|https://www.uniprot.org/uniprot/Q9PY95|https://www.uniprot.org/uniprot/Q9ICB2|https://www.uniprot.org/uniprot/Q91ME7|https://www.uniprot.org/uniprot/Q8UZL8|https://www.uniprot.org/uniprot/Q8B6X8|https://www.uniprot.org/uniprot/Q8B6X7|https://www.uniprot.org/uniprot/Q86504|https://www.uniprot.org/uniprot/Q86196|https://www.uniprot.org/uniprot/Q85014|https://www.uniprot.org/uniprot/Q82054|https://www.uniprot.org/uniprot/Q82053|https://www.uniprot.org/uniprot/Q82052|https://www.uniprot.org/uniprot/Q82051|https://www.uniprot.org/uniprot/Q82050|https://www.uniprot.org/uniprot/Q82049|https://www.uniprot.org/uniprot/Q65701|https://www.uniprot.org/uniprot/Q5Y9A9|https://www.uniprot.org/uniprot/Q5K037|https://www.uniprot.org/uniprot/Q45UF3|https://www.uniprot.org/uniprot/Q3ZK63|https://www.uniprot.org/uniprot/Q27PP2|https://www.uniprot.org/uniprot/Q0H8C1|https://www.uniprot.org/uniprot/Q00721|https://www.uniprot.org/uniprot/P34717|https://www.uniprot.org/uniprot/P27586|https://www.uniprot.org/uniprot/P04514|https://www.uniprot.org/uniprot/P03536|https://www.uniprot.org/uniprot/B3SRX7|https://www.uniprot.org/uniprot/B3SRW9|https://www.uniprot.org/uniprot/B3SRV3|https://www.uniprot.org/uniprot/B3SRU5|https://www.uniprot.org/uniprot/B3SRS9|https://www.uniprot.org/uniprot/B3SRS1|https://www.uniprot.org/uniprot/B3SRR3|https://www.uniprot.org/uniprot/B3SRQ5|https://www.uniprot.org/uniprot/B2BRG4|https://www.uniprot.org/uniprot/A4ZCW4|https://www.uniprot.org/uniprot/A3DSK9|https://www.uniprot.org/uniprot/A2T3N5|https://www.uniprot.org/uniprot/A1YTU9 |
T2033 | 737-741 | Protein | denotes | ORF6 | https://www.uniprot.org/uniprot/P51707|https://www.uniprot.org/uniprot/P42541|https://www.uniprot.org/uniprot/P0DTC6 |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T44068 | 0-3 | CD | denotes | 5.2 |
T95208 | 5-13 | NNP | denotes | Rational |
T91019 | 13-14 | -COLON- | denotes | : |
T95927 | 15-26 | JJ | denotes | Recombinant |
T3712 | 27-31 | NN | denotes | type |
T46872 | 32-33 | CD | denotes | I |
T95232 | 34-37 | NN | denotes | IFN |
T83801 | 38-41 | MD | denotes | can |
T31121 | 42-53 | RB | denotes | effectively |
T50200 | 54-61 | VB | denotes | inhibit |
T51383 | 62-71 | NN | denotes | SARS-CoV2 |
T97492 | 72-83 | NN | denotes | replication |
T96177 | 84-86 | IN | denotes | In |
T72452 | 87-94 | NN | denotes | 24–48 h |
T50493 | 95-100 | IN | denotes | after |
T17096 | 101-110 | NN | denotes | infection |
T97012 | 110-111 | -COMMA- | denotes | , |
T67170 | 112-121 | NN | denotes | SARS-CoV2 |
T9761 | 122-133 | NN | denotes | replication |
T69880 | 134-141 | VBZ | denotes | reaches |
T9709 | 142-147 | NN | denotes | titer |
T49785 | 148-152 | WDT | denotes | that |
T71708 | 153-159 | VBZ | denotes | causes |
T52777 | 160-163 | DT | denotes | the |
T56623 | 164-174 | JJ | denotes | cytopathic |
T87850 | 175-181 | NN | denotes | effect |
T47272 | 182-184 | IN | denotes | in |
T71726 | 185-189 | NN | denotes | Vero |
T42629 | 190-192 | NN | denotes | E6 |
T73531 | 193-198 | NNS | denotes | cells |
T60353 | 198-199 | -COMMA- | denotes | , |
T83400 | 200-205 | WDT | denotes | which |
T80948 | 206-213 | VBP | denotes | express |
T12338 | 214-218 | NN | denotes | ACE2 |
T60658 | 219-222 | CC | denotes | and |
T41368 | 223-227 | RB | denotes | thus |
T89464 | 228-231 | VBP | denotes | are |
T62340 | 232-243 | JJ | denotes | susceptible |
T6873 | 244-246 | TO | denotes | to |
T68175 | 247-256 | NN | denotes | SARS-CoV2 |
T16296 | 257-266 | NN | denotes | infection |
T12529 | 267-268 | -LRB- | denotes | [ |
T55131 | 268-270 | CD | denotes | 25 |
T28678 | 270-271 | -RRB- | denotes | ] |
T52876 | 273-275 | PRP | denotes | It |
T21084 | 276-278 | VBZ | denotes | is |
T70918 | 279-286 | JJ | denotes | similar |
T20327 | 287-289 | TO | denotes | to |
T13471 | 290-293 | DT | denotes | the |
T26039 | 294-299 | JJ | denotes | viral |
T64125 | 300-311 | NN | denotes | replication |
T62855 | 312-320 | NNS | denotes | kinetics |
T68614 | 321-324 | IN | denotes | for |
T64958 | 325-333 | NN | denotes | SARS-CoV |
T62199 | 334-335 | -LRB- | denotes | [ |
T27403 | 335-337 | CD | denotes | 25 |
T34963 | 337-338 | -RRB- | denotes | ] |
T49689 | 340-352 | NN | denotes | Pretreatment |
T74739 | 353-357 | IN | denotes | with |
T62356 | 358-369 | JJ | denotes | recombinant |
T67333 | 370-374 | NN | denotes | type |
T31833 | 375-376 | CD | denotes | I |
T78772 | 377-380 | NN | denotes | IFN |
T57406 | 381-386 | MD | denotes | could |
T5100 | 387-398 | RB | denotes | effectively |
T32529 | 399-406 | VB | denotes | inhibit |
T31501 | 407-416 | NN | denotes | SARS-CoV2 |
T43668 | 417-428 | NN | denotes | replication |
T86722 | 429-431 | IN | denotes | at |
T26971 | 432-436 | CC | denotes | both |
T35627 | 437-439 | CD | denotes | 24 |
T29701 | 440-443 | CC | denotes | and |
T48153 | 444-448 | NN | denotes | 48 h |
T93874 | 449-454 | IN | denotes | after |
T7550 | 455-464 | NN | denotes | infection |
T23827 | 465-466 | -LRB- | denotes | [ |
T6071 | 466-468 | CD | denotes | 25 |
T91011 | 468-469 | -RRB- | denotes | ] |
T51029 | 471-474 | IN | denotes | For |
T64526 | 475-483 | NN | denotes | SARS-CoV |
T41819 | 483-484 | -COMMA- | denotes | , |
T5764 | 485-489 | PDT | denotes | such |
T79954 | 490-492 | DT | denotes | an |
T48924 | 493-499 | NN | denotes | effect |
T40034 | 500-503 | VBD | denotes | was |
T1935 | 504-511 | JJ | denotes | present |
T31311 | 512-514 | IN | denotes | at |
T94385 | 515-519 | CD | denotes | 24 h |
T84543 | 520-523 | CC | denotes | but |
T64490 | 524-530 | JJ | denotes | absent |
T33679 | 531-533 | IN | denotes | at |
T68271 | 534-538 | NN | denotes | 48 h |
T69307 | 539-544 | IN | denotes | after |
T51672 | 545-554 | NN | denotes | infection |
T85433 | 555-556 | -LRB- | denotes | [ |
T72350 | 556-558 | CD | denotes | 25 |
T63406 | 558-559 | -RRB- | denotes | ] |
T46096 | 561-564 | DT | denotes | The |
T71403 | 565-575 | NN | denotes | difference |
T17651 | 576-583 | IN | denotes | between |
T77482 | 584-593 | NN | denotes | SARS-CoV2 |
T6733 | 594-597 | CC | denotes | and |
T6622 | 598-606 | NN | denotes | SARS-CoV |
T66580 | 607-609 | IN | denotes | in |
T74975 | 610-618 | NN | denotes | response |
T1853 | 619-621 | TO | denotes | to |
T87892 | 622-626 | NN | denotes | type |
T83308 | 627-628 | CD | denotes | I |
T81934 | 629-632 | NN | denotes | IFN |
T42652 | 633-642 | NN | denotes | treatment |
T91527 | 643-646 | MD | denotes | may |
T42839 | 647-649 | VB | denotes | be |
T98810 | 650-653 | JJ | denotes | due |
T31126 | 654-656 | TO | denotes | to |
T23141 | 657-668 | NNS | denotes | differences |
T45488 | 669-671 | IN | denotes | in |
T39296 | 672-682 | JJ | denotes | structural |
T12723 | 683-691 | NNS | denotes | proteins |
T40582 | 692-694 | IN | denotes | of |
T48639 | 695-700 | DT | denotes | these |
T20513 | 701-708 | NNS | denotes | viruses |
T37519 | 708-709 | -COMMA- | denotes | , |
T18237 | 710-719 | VBG | denotes | including |
T17094 | 720-724 | NN | denotes | NSP3 |
T86991 | 724-725 | -COMMA- | denotes | , |
T14810 | 726-731 | NN | denotes | ORF3b |
T9269 | 731-732 | -COMMA- | denotes | , |
T18064 | 733-736 | CC | denotes | and |
T40695 | 737-741 | NN | denotes | ORF6 |
T59456 | 742-743 | -LRB- | denotes | [ |
T34145 | 743-745 | CD | denotes | 25 |
T98303 | 745-746 | -RRB- | denotes | ] |
R31420 | T69880 | T96177 | arg1Of | reaches,In |
R8938 | T72452 | T96177 | arg2Of | 24–48 h,In |
R22070 | T72452 | T50493 | arg1Of | 24–48 h,after |
R29558 | T17096 | T50493 | arg2Of | infection,after |
R81743 | T69880 | T97012 | arg1Of | reaches,"," |
R54619 | T9761 | T67170 | arg1Of | replication,SARS-CoV2 |
R28733 | T9761 | T69880 | arg1Of | replication,reaches |
R54888 | T9709 | T69880 | arg2Of | titer,reaches |
R54019 | T9709 | T49785 | arg1Of | titer,that |
R2019 | T9709 | T71708 | arg1Of | titer,causes |
R69166 | T87850 | T71708 | arg2Of | effect,causes |
R70600 | T87850 | T52777 | arg1Of | effect,the |
R54949 | T87850 | T56623 | arg1Of | effect,cytopathic |
R12484 | T95208 | T44068 | arg1Of | Rational,5.2 |
R35124 | T95208 | T91019 | arg1Of | Rational,: |
R50751 | T95232 | T95927 | arg1Of | IFN,Recombinant |
R74572 | T95232 | T3712 | arg1Of | IFN,type |
R58753 | T95232 | T46872 | arg1Of | IFN,I |
R16030 | T95232 | T83801 | arg1Of | IFN,can |
R78959 | T50200 | T83801 | arg2Of | inhibit,can |
R77408 | T50200 | T31121 | arg1Of | inhibit,effectively |
R98880 | T95232 | T50200 | arg1Of | IFN,inhibit |
R90780 | T97492 | T50200 | arg2Of | replication,inhibit |
R70416 | T97492 | T51383 | arg1Of | replication,SARS-CoV2 |
R67236 | T71708 | T47272 | arg1Of | causes,in |
R90604 | T73531 | T47272 | arg2Of | cells,in |
R51483 | T73531 | T71726 | arg1Of | cells,Vero |
R13941 | T73531 | T42629 | arg1Of | cells,E6 |
R47369 | T73531 | T60353 | arg1Of | cells,"," |
R77344 | T73531 | T83400 | arg1Of | cells,which |
R51996 | T73531 | T80948 | arg1Of | cells,express |
R29937 | T12338 | T80948 | arg2Of | ACE2,express |
R56727 | T80948 | T60658 | arg1Of | express,and |
R89880 | T89464 | T60658 | arg2Of | are,and |
R41139 | T89464 | T41368 | arg1Of | are,thus |
R40674 | T73531 | T89464 | arg1Of | cells,are |
R2313 | T62340 | T89464 | arg2Of | susceptible,are |
R71574 | T73531 | T62340 | arg1Of | cells,susceptible |
R18320 | T62340 | T6873 | arg1Of | susceptible,to |
R10483 | T16296 | T6873 | arg2Of | infection,to |
R64279 | T16296 | T68175 | arg1Of | infection,SARS-CoV2 |
R82228 | T89464 | T12529 | arg1Of | are,[ |
R14351 | T55131 | T12529 | arg2Of | 25,[ |
R89760 | T28678 | T12529 | arg3Of | ],[ |
R98431 | T52876 | T21084 | arg1Of | It,is |
R14327 | T70918 | T21084 | arg2Of | similar,is |
R4320 | T52876 | T70918 | arg1Of | It,similar |
R34375 | T70918 | T20327 | arg1Of | similar,to |
R71339 | T62855 | T20327 | arg2Of | kinetics,to |
R35190 | T62855 | T13471 | arg1Of | kinetics,the |
R34673 | T62855 | T26039 | arg1Of | kinetics,viral |
R67158 | T62855 | T64125 | arg1Of | kinetics,replication |
R90913 | T70918 | T68614 | arg1Of | similar,for |
R5275 | T64958 | T68614 | arg2Of | SARS-CoV,for |
R43068 | T64958 | T62199 | arg1Of | SARS-CoV,[ |
R10807 | T27403 | T62199 | arg2Of | 25,[ |
R91008 | T34963 | T62199 | arg3Of | ],[ |
R68776 | T49689 | T74739 | arg1Of | Pretreatment,with |
R59690 | T78772 | T74739 | arg2Of | IFN,with |
R64010 | T78772 | T62356 | arg1Of | IFN,recombinant |
R73596 | T78772 | T67333 | arg1Of | IFN,type |
R44930 | T78772 | T31833 | arg1Of | IFN,I |
R49184 | T49689 | T57406 | arg1Of | Pretreatment,could |
R80908 | T32529 | T57406 | arg2Of | inhibit,could |
R7756 | T32529 | T5100 | arg1Of | inhibit,effectively |
R41655 | T49689 | T32529 | arg1Of | Pretreatment,inhibit |
R47659 | T43668 | T32529 | arg2Of | replication,inhibit |
R36370 | T43668 | T31501 | arg1Of | replication,SARS-CoV2 |
R34213 | T32529 | T86722 | arg1Of | inhibit,at |
R26206 | T29701 | T86722 | arg2Of | and,at |
R82903 | T29701 | T26971 | arg1Of | and,both |
R75547 | T35627 | T29701 | arg1Of | 24,and |
R90827 | T48153 | T29701 | arg2Of | 48 h,and |
R69068 | T32529 | T93874 | arg1Of | inhibit,after |
R47977 | T7550 | T93874 | arg2Of | infection,after |
R38076 | T7550 | T23827 | arg1Of | infection,[ |
R72421 | T6071 | T23827 | arg2Of | 25,[ |
R2860 | T91011 | T23827 | arg3Of | ],[ |
R21012 | T40034 | T51029 | arg1Of | was,For |
R42425 | T64526 | T51029 | arg2Of | SARS-CoV,For |
R88091 | T40034 | T41819 | arg1Of | was,"," |
R54495 | T48924 | T5764 | arg1Of | effect,such |
R26625 | T48924 | T79954 | arg1Of | effect,an |
R41534 | T48924 | T40034 | arg1Of | effect,was |
R24883 | T84543 | T40034 | arg2Of | but,was |
R86398 | T48924 | T1935 | arg1Of | effect,present |
R81876 | T1935 | T31311 | arg1Of | present,at |
R72270 | T94385 | T31311 | arg2Of | 24 h,at |
R12851 | T1935 | T84543 | arg1Of | present,but |
R60363 | T64490 | T84543 | arg2Of | absent,but |
R81621 | T48924 | T64490 | arg1Of | effect,absent |
R79664 | T84543 | T33679 | arg1Of | but,at |
R9487 | T68271 | T33679 | arg2Of | 48 h,at |
R71731 | T68271 | T69307 | arg1Of | 48 h,after |
R56025 | T51672 | T69307 | arg2Of | infection,after |
R2152 | T51672 | T85433 | arg1Of | infection,[ |
R22284 | T72350 | T85433 | arg2Of | 25,[ |
R9566 | T63406 | T85433 | arg3Of | ],[ |
R51347 | T71403 | T46096 | arg1Of | difference,The |
R4839 | T71403 | T17651 | arg1Of | difference,between |
R32316 | T6733 | T17651 | arg2Of | and,between |
R84108 | T77482 | T6733 | arg1Of | SARS-CoV2,and |
R18562 | T6622 | T6733 | arg2Of | SARS-CoV,and |
R2587 | T6733 | T66580 | arg1Of | and,in |
R24267 | T74975 | T66580 | arg2Of | response,in |
R82007 | T74975 | T1853 | arg1Of | response,to |
R35751 | T42652 | T1853 | arg2Of | treatment,to |
R70872 | T42652 | T87892 | arg1Of | treatment,type |
R16675 | T42652 | T83308 | arg1Of | treatment,I |
R93961 | T42652 | T81934 | arg1Of | treatment,IFN |
R17630 | T71403 | T91527 | arg1Of | difference,may |
R18684 | T42839 | T91527 | arg2Of | be,may |
R22926 | T71403 | T42839 | arg1Of | difference,be |
R74216 | T31126 | T42839 | arg2Of | to,be |
R18552 | T31126 | T98810 | arg1Of | to,due |
R78491 | T71403 | T31126 | arg1Of | difference,to |
R99441 | T23141 | T31126 | arg2Of | differences,to |
R87106 | T23141 | T45488 | arg1Of | differences,in |
R95354 | T12723 | T45488 | arg2Of | proteins,in |
R28120 | T12723 | T39296 | arg1Of | proteins,structural |
R78454 | T12723 | T40582 | arg1Of | proteins,of |
R26738 | T20513 | T40582 | arg2Of | viruses,of |
R35077 | T20513 | T48639 | arg1Of | viruses,these |
R70559 | T12723 | T37519 | arg1Of | proteins,"," |
R50810 | T12723 | T18237 | arg1Of | proteins,including |
R8147 | T18064 | T18237 | arg2Of | and,including |
R72409 | T17094 | T86991 | arg1Of | NSP3,"," |
R12802 | T14810 | T86991 | arg2Of | ORF3b,"," |
R29123 | T18064 | T9269 | arg1Of | and,"," |
R68379 | T86991 | T18064 | arg1Of | ",",and |
R4978 | T40695 | T18064 | arg2Of | ORF6,and |
R22872 | T18064 | T59456 | arg1Of | and,[ |
R60583 | T34145 | T59456 | arg2Of | 25,[ |
R50503 | T98303 | T59456 | arg3Of | ],[ |
LitCovid-sample-PD-GO-BP-0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T27 | 294-311 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
T28 | 294-311 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
T29 | 610-632 | http://purl.obolibrary.org/obo/GO_0034340 | denotes | response to type I IFN |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T147 | 193-198 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T148 | 683-691 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-sample-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T134 | 62-71 | Disease | denotes | SARS-CoV2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T135 | 101-110 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T136 | 112-121 | Disease | denotes | SARS-CoV2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T137 | 247-256 | Disease | denotes | SARS-CoV2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T138 | 257-266 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T139 | 325-333 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T140 | 407-416 | Disease | denotes | SARS-CoV2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T141 | 455-464 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T142 | 475-483 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T143 | 545-554 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T144 | 584-593 | Disease | denotes | SARS-CoV2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T145 | 598-606 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-sample-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T23 | 294-311 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
T24 | 294-311 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
T25 | 610-632 | http://purl.obolibrary.org/obo/GO_0034340 | denotes | response to type I IFN |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T23 | 294-311 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
T24 | 294-311 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
T25 | 610-632 | http://purl.obolibrary.org/obo/GO_0034340 | denotes | response to type I IFN |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T157 | 0-14 | Sentence | denotes | 5.2 Rational: |
T158 | 15-83 | Sentence | denotes | Recombinant type I IFN can effectively inhibit SARS-CoV2 replication |
T159 | 84-272 | Sentence | denotes | In 24–48 h after infection, SARS-CoV2 replication reaches titer that causes the cytopathic effect in Vero E6 cells, which express ACE2 and thus are susceptible to SARS-CoV2 infection [25]. |
T160 | 273-339 | Sentence | denotes | It is similar to the viral replication kinetics for SARS-CoV [25]. |
T161 | 340-470 | Sentence | denotes | Pretreatment with recombinant type I IFN could effectively inhibit SARS-CoV2 replication at both 24 and 48 h after infection [25]. |
T162 | 471-560 | Sentence | denotes | For SARS-CoV, such an effect was present at 24 h but absent at 48 h after infection [25]. |
T163 | 561-747 | Sentence | denotes | The difference between SARS-CoV2 and SARS-CoV in response to type I IFN treatment may be due to differences in structural proteins of these viruses, including NSP3, ORF3b, and ORF6 [25]. |