> top > docs > PMC:7200337 > spans > 57327-65250 > annotations

PMC:7200337 / 57327-65250 JSONTXT

Annnotations TAB JSON ListView MergeView

2_test

Id Subject Object Predicate Lexical cue
32505227-32265220-46575366 1543-1547 32265220 denotes 2020
32505227-32265220-46575368 2077-2081 32265220 denotes 2020
32505227-32265220-46575369 2389-2393 32265220 denotes 2020
32505227-32265220-46575370 2700-2704 32265220 denotes 2020
T67844 1543-1547 32265220 denotes 2020
T81666 2077-2081 32265220 denotes 2020
T24032 2389-2393 32265220 denotes 2020
T75549 2700-2704 32265220 denotes 2020

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T541 16-21 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T542 384-392 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T543 407-412 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T544 421-428 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T545 445-452 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T546 740-745 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T547 1183-1188 Body_part denotes Blood http://purl.org/sig/ont/fma/fma9670
T548 1286-1296 Body_part denotes Lymphocyte http://purl.org/sig/ont/fma/fma62863
T549 2246-2250 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T550 3560-3568 Body_part denotes Platelet http://purl.org/sig/ont/fma/fma62851
T551 3580-3588 Body_part denotes platelet http://purl.org/sig/ont/fma/fma62851
T552 3592-3602 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T553 3833-3840 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T554 3836-3840 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T555 3870-3878 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T556 3873-3878 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T557 4049-4054 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T558 4097-4102 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T559 4334-4339 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T560 4384-4410 Body_part denotes peripheral blood monocytes http://purl.org/sig/ont/fma/fma86713
T561 4452-4461 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T562 4703-4712 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T563 4839-4848 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T564 5697-5706 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T565 5761-5771 Body_part denotes eosinophil http://purl.org/sig/ont/fma/fma62861
T566 5823-5827 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T567 5834-5838 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T568 5841-5850 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T569 5912-5916 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T570 5917-5920 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T571 5968-5976 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T572 6003-6007 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T573 6177-6181 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T574 6308-6312 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T575 6343-6348 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T576 6422-6426 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T577 6518-6521 Body_part denotes CSF http://purl.org/sig/ont/fma/fma20935
T578 6525-6528 Body_part denotes CSF http://purl.org/sig/ont/fma/fma20935
T579 6538-6543 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T580 6601-6604 Body_part denotes CSF http://purl.org/sig/ont/fma/fma20935
T581 6606-6615 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T582 6702-6706 Body_part denotes IL-2 http://purl.org/sig/ont/fma/fma84051
T583 6717-6721 Body_part denotes IL-2 http://purl.org/sig/ont/fma/fma84051
T584 6819-6827 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T585 6856-6859 Body_part denotes IgM http://purl.org/sig/ont/fma/fma62873
T586 6972-6975 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T587 7090-7096 Body_part denotes Organs http://purl.org/sig/ont/fma/fma67498
T588 7166-7188 Body_part denotes gastrointestinal tract http://purl.org/sig/ont/fma/fma71132
T589 7190-7197 Body_part denotes kidneys http://purl.org/sig/ont/fma/fma7203
T590 7203-7209 Body_part denotes testis http://purl.org/sig/ont/fma/fma7210
T591 7271-7275 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T592 7333-7338 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T593 7340-7365 Body_part denotes alveolar epithelial cells http://purl.org/sig/ont/fma/fma62499
T594 7360-7365 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T595 7416-7432 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T596 7427-7432 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T597 7441-7446 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T598 7473-7484 Body_part denotes hepatocytes http://purl.org/sig/ont/fma/fma14515
T599 7486-7499 Body_part denotes Kupffer cells http://purl.org/sig/ont/fma/fma14656
T600 7494-7499 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T601 7504-7521 Body_part denotes endothelial cells http://purl.org/sig/ont/fma/fma66772
T602 7516-7521 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T603 7575-7580 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T604 7648-7659 Body_part denotes enterocytes http://purl.org/sig/ont/fma/fma62122
T605 7667-7682 Body_part denotes small intestine http://purl.org/sig/ont/fma/fma7200
T606 7699-7704 Body_part denotes colon http://purl.org/sig/ont/fma/fma14543
T607 7794-7801 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T608 7807-7818 Body_part denotes interleukin http://purl.org/sig/ont/fma/fma86578
T609 7825-7835 Body_part denotes neutrophil http://purl.org/sig/ont/fma/fma62860
T610 7839-7849 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T62 16-21 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T63 407-412 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T64 740-745 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T65 1040-1046 Body_part denotes organs http://purl.obolibrary.org/obo/UBERON_0000062
T66 1183-1188 Body_part denotes Blood http://purl.obolibrary.org/obo/UBERON_0000178
T67 2246-2250 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T68 4395-4400 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T69 6177-6181 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T70 7090-7096 Body_part denotes Organs http://purl.obolibrary.org/obo/UBERON_0000062
T71 7203-7209 Body_part denotes testis http://purl.obolibrary.org/obo/UBERON_0000473
T72 7253-7259 Body_part denotes organs http://purl.obolibrary.org/obo/UBERON_0000062
T73 7441-7446 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T74 7575-7580 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T75 7667-7682 Body_part denotes small intestine http://purl.obolibrary.org/obo/UBERON_0002108
T76 7673-7682 Body_part denotes intestine http://purl.obolibrary.org/obo/UBERON_0000160
T77 7699-7704 Body_part denotes colon http://purl.obolibrary.org/obo/UBERON_0001155

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T362 413-420 Disease denotes amyloid http://purl.obolibrary.org/obo/MONDO_0019065
T363 534-542 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T364 575-591 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T365 675-678 Disease denotes PCT http://purl.obolibrary.org/obo/MONDO_0008296|http://purl.obolibrary.org/obo/MONDO_0015104
T367 896-904 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T368 1057-1065 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T369 1232-1240 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T370 1923-1932 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T371 1943-1952 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T372 2013-2021 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T373 2494-2500 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T374 2653-2661 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T375 2877-2915 Disease denotes disseminated intravascular coagulation http://purl.obolibrary.org/obo/MONDO_0001243
T376 3011-3017 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T377 3530-3538 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T378 3662-3678 Disease denotes Thrombocytopenia http://purl.obolibrary.org/obo/MONDO_0002049
T379 3745-3751 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T380 3755-3763 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T381 3916-3924 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T382 4925-4933 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T383 5229-5248 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T384 5745-5748 Disease denotes PCT http://purl.obolibrary.org/obo/MONDO_0008296|http://purl.obolibrary.org/obo/MONDO_0015104
T386 5784-5792 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T387 6366-6374 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T388 6630-6638 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T389 6808-6816 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T390 6845-6853 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T391 6961-6969 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T392 7139-7147 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T393 7581-7587 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T688 16-21 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T689 16-21 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T690 1040-1046 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organs
T691 1183-1188 http://purl.obolibrary.org/obo/UBERON_0000178 denotes Blood
T692 1183-1188 http://www.ebi.ac.uk/efo/EFO_0000296 denotes Blood
T693 1856-1857 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T694 2246-2250 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T695 2246-2250 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T696 3119-3130 http://purl.obolibrary.org/obo/PR_000007299 denotes prothrombin
T697 3141-3150 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated
T698 3356-3357 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T699 3416-3417 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T700 3435-3442 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T701 3817-3820 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T702 3823-3826 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T703 3833-3840 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T704 3854-3857 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T705 3860-3863 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T706 3870-3878 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T707 4023-4030 http://purl.obolibrary.org/obo/CLO_0001914 denotes and Tim
T708 4047-4054 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T709 4071-4078 http://purl.obolibrary.org/obo/CLO_0001914 denotes and Tim
T710 4095-4102 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T711 4320-4323 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T712 4328-4331 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T713 4332-4339 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T714 4395-4400 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T715 4395-4400 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T716 4401-4410 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T717 4427-4428 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T718 4452-4461 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T719 4511-4515 http://purl.obolibrary.org/obo/PR_000002064 denotes CD68
T720 4518-4522 http://purl.obolibrary.org/obo/PR_000001438 denotes CD80
T721 4703-4712 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T722 4827-4829 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T723 4937-4938 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T724 5270-5274 http://purl.obolibrary.org/obo/CLO_0053704 denotes IL-8
T725 5398-5402 http://purl.obolibrary.org/obo/CLO_0053704 denotes IL-8
T726 5535-5536 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T727 5629-5634 http://purl.obolibrary.org/obo/PR_000001380 denotes IL-2R
T728 5671-5672 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T729 5841-5850 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T730 5903-5904 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T731 5912-5916 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T732 6052-6053 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T733 6177-6181 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T734 6177-6181 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T735 6235-6236 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T736 6286-6288 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T737 6308-6312 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T738 6341-6348 http://purl.obolibrary.org/obo/CL_0000236 denotes B cells
T739 6388-6390 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T740 6420-6426 http://purl.obolibrary.org/obo/CL_0000236 denotes B cell
T741 6536-6543 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T742 6606-6615 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T743 6702-6706 http://purl.obolibrary.org/obo/PR_000001379 denotes IL-2
T744 6717-6721 http://purl.obolibrary.org/obo/PR_000001379 denotes IL-2
T745 6892-6893 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T746 7090-7108 http://purl.obolibrary.org/obo/UBERON_0000467 denotes Organs and Systems
T747 7166-7188 http://purl.obolibrary.org/obo/UBERON_0005409 denotes gastrointestinal tract
T748 7190-7197 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidneys
T749 7190-7197 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidneys
T750 7190-7197 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidneys
T751 7203-7209 http://www.ebi.ac.uk/efo/EFO_0000984 denotes testis
T752 7253-7259 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organs
T753 7271-7281 http://purl.obolibrary.org/obo/CL_0000000 denotes cell types
T754 7333-7338 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T755 7349-7359 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T756 7360-7365 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T757 7416-7426 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T758 7427-7432 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T759 7441-7446 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T96254 7441-7446 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T761 7494-7499 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T762 7504-7521 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T763 7575-7580 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T764 7575-7580 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T765 7667-7682 http://purl.obolibrary.org/obo/UBERON_0002108 denotes small intestine
T766 7699-7704 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colon
T767 7750-7751 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T768 7769-7776 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T769 7861-7872 http://purl.obolibrary.org/obo/PR_000007299 denotes prothrombin
T770 7885-7894 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T9 384-392 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T87618 421-428 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T11 445-452 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T30523 684-686 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T86952 746-750 Chemical denotes urea http://purl.obolibrary.org/obo/CHEBI_16199
T22214 752-762 Chemical denotes creatinine http://purl.obolibrary.org/obo/CHEBI_16737
T32726 783-792 Chemical denotes bilirubin http://purl.obolibrary.org/obo/CHEBI_16990
T93079 2129-2138 Chemical denotes biomarker http://purl.obolibrary.org/obo/CHEBI_59163
T80180 3435-3442 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T44665 4018-4020 Chemical denotes PD http://purl.obolibrary.org/obo/CHEBI_74756
T10664 4066-4068 Chemical denotes PD http://purl.obolibrary.org/obo/CHEBI_74756
T42987 4559-4561 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T62277 4565-4567 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T25505 4697-4699 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T7879 4765-4770 Chemical denotes IP-10 http://purl.obolibrary.org/obo/CHEBI_138157
T28 4765-4767 Chemical denotes IP http://purl.obolibrary.org/obo/CHEBI_74076
T29 4772-4775 Chemical denotes MCP http://purl.obolibrary.org/obo/CHEBI_132592|http://purl.obolibrary.org/obo/CHEBI_50099
T91847 4783-4785 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T46613 4790-4795 Chemical denotes IP-10 http://purl.obolibrary.org/obo/CHEBI_138157
T39459 4790-4792 Chemical denotes IP http://purl.obolibrary.org/obo/CHEBI_74076
T9315 4797-4800 Chemical denotes MCP http://purl.obolibrary.org/obo/CHEBI_132592|http://purl.obolibrary.org/obo/CHEBI_50099
T37 4808-4810 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T51658 4982-4984 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T54106 5270-5272 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T25821 5398-5400 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T24408 5411-5413 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T47 5629-5631 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T49 5823-5825 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T51 5834-5836 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T53 6003-6005 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T55 6138-6140 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T88508 6143-6145 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T55493 6283-6285 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T61 6385-6387 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T15544 6515-6517 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120
T25513 6522-6524 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120
T38568 6598-6600 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120
T49266 6702-6704 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T1095 6717-6719 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T49020 7712-7723 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T9385 7745-7748 Chemical denotes BNP http://purl.obolibrary.org/obo/CHEBI_80234
T32155 7769-7776 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T73 7794-7801 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T34446 7803-7805 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T67041 7857-7859 Chemical denotes PT http://purl.obolibrary.org/obo/CHEBI_141395

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T30 1923-1932 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T31 1943-1952 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T32 2877-2915 Phenotype denotes disseminated intravascular coagulation http://purl.obolibrary.org/obo/HP_0005521
T33 3662-3678 Phenotype denotes Thrombocytopenia http://purl.obolibrary.org/obo/HP_0001873
T34 5229-5248 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T35 5968-5982 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T164 575-591 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections
T165 764-772 http://purl.obolibrary.org/obo/GO_0004869 denotes cystatin
T166 2759-2770 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T167 2904-2915 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T168 3045-3056 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T169 3084-3095 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation
T170 4783-4789 http://purl.obolibrary.org/obo/GO_0005152 denotes IL-1ra
T171 4808-4814 http://purl.obolibrary.org/obo/GO_0005152 denotes IL-1ra
T172 5629-5634 http://purl.obolibrary.org/obo/GO_0004911 denotes IL-2R

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1901 2203-2206 Gene denotes CRP Gene:1401
1902 3817-3820 Gene denotes CD4 Gene:920
1903 3823-3826 Gene denotes CD8 Gene:925
1904 3854-3857 Gene denotes CD4 Gene:920
1905 3860-3863 Gene denotes CD8 Gene:925
1906 4027-4032 Gene denotes Tim-3 Gene:84868
1907 4075-4080 Gene denotes Tim-3 Gene:84868
1908 4320-4323 Gene denotes CD4 Gene:920
1909 4328-4331 Gene denotes CD8 Gene:925
1910 4489-4494 Gene denotes CD11b Gene:3684
1911 4525-4530 Gene denotes CD163 Gene:9332
1912 4537-4542 Gene denotes CD206 Gene:4360
1913 4559-4563 Gene denotes IL-6 Gene:3569
1914 4565-4570 Gene denotes IL-10 Gene:3586
1915 4576-4581 Gene denotes TNF-α Gene:7124
1916 4697-4701 Gene denotes IL-6 Gene:3569
1917 4765-4770 Gene denotes IP-10 Gene:3627
1918 4783-4787 Gene denotes IL-1 Gene:3552
1919 4790-4795 Gene denotes IP-10 Gene:3627
1920 4808-4814 Gene denotes IL-1ra Gene:3554
1921 4982-4986 Gene denotes IL-6 Gene:3569
1922 5270-5274 Gene denotes IL-8 Gene:3576
1923 5398-5402 Gene denotes IL-8 Gene:3576
1924 5411-5416 Gene denotes IL-10 Gene:3586
1925 5629-5634 Gene denotes IL-2R Gene:3559
1926 5823-5828 Gene denotes IL-1β Gene:3552
1927 5834-5839 Gene denotes IL-1β Gene:3552
1928 6003-6008 Gene denotes IL-1β Gene:3552
1929 6138-6147 Gene denotes IL-4 IL-4 Gene:3565
1930 6283-6288 Gene denotes IL-18 Gene:3606
1931 6385-6390 Gene denotes IL-18 Gene:3606
1932 6529-6534 Gene denotes IFN-γ Gene:3458
1933 6598-6604 Gene denotes GM-CSF Gene:1437
1934 6702-6706 Gene denotes IL-2 Gene:3558
1935 6726-6731 Gene denotes IFN-γ Gene:3458
1936 2104-2107 Gene denotes CRP Gene:1401
1937 5470-5472 Gene denotes to Gene:6999
1938 4159-4161 Gene denotes to Gene:6999
1939 3589-3591 Gene denotes to Gene:6999
1940 3264-3266 Gene denotes to Gene:6999
1941 2625-2627 Gene denotes to Gene:6999
1942 1984-1986 Gene denotes to Gene:6999
1943 1933-1935 Gene denotes to Gene:6999
1944 1790-1792 Gene denotes to Gene:6999
1945 1760-1762 Gene denotes to Gene:6999
1946 1742-1744 Gene denotes to Gene:6999
1947 1367-1375 Species denotes patients Tax:9606
1948 1669-1677 Species denotes patients Tax:9606
1949 1704-1712 Species denotes Patients Tax:9606
1950 1900-1908 Species denotes patients Tax:9606
1951 2976-2984 Species denotes patients Tax:9606
1952 3344-3352 Species denotes patients Tax:9606
1953 3509-3517 Species denotes patients Tax:9606
1954 4124-4132 Species denotes patients Tax:9606
1955 4244-4252 Species denotes patients Tax:9606
1956 4303-4311 Species denotes patients Tax:9606
1957 4601-4609 Species denotes patients Tax:9606
1958 4734-4742 Species denotes patients Tax:9606
1959 5449-5457 Species denotes patients Tax:9606
1960 5478-5486 Species denotes patients Tax:9606
1961 5882-5890 Species denotes patients Tax:9606
1962 6108-6116 Species denotes patients Tax:9606
1963 6375-6383 Species denotes patients Tax:9606
1964 6578-6586 Species denotes patients Tax:9606
1965 6639-6647 Species denotes patients Tax:9606
1966 6845-6855 Species denotes SARS-CoV-2 Tax:2697049
1967 6808-6818 Species denotes SARS-CoV-2 Tax:2697049
1968 6961-6971 Species denotes SARS-CoV-2 Tax:2697049
1969 3390-3399 Chemical denotes NT-proBNP
1970 3444-3453 Chemical denotes NT-proBNP
1971 1923-1932 Disease denotes pneumonia MESH:D011014
1972 1943-1952 Disease denotes pneumonia MESH:D011014
1973 2013-2021 Disease denotes COVID-19 MESH:C000657245
1974 2246-2258 Disease denotes lung lesions MESH:D008171
1975 2483-2500 Disease denotes myocardial injury MESH:D009202
1976 2653-2661 Disease denotes COVID-19 MESH:C000657245
1977 2877-2915 Disease denotes disseminated intravascular coagulation MESH:D004211
1978 3003-3017 Disease denotes cardiac injury MESH:D006331
1979 3500-3505 Disease denotes death MESH:D003643
1980 3530-3538 Disease denotes COVID-19 MESH:C000657245
1981 3662-3678 Disease denotes Thrombocytopenia MESH:D013921
1982 3734-3751 Disease denotes myocardial injury MESH:D009202
1983 3755-3763 Disease denotes COVID-19 MESH:C000657245
1984 3916-3924 Disease denotes COVID-19 MESH:C000657245
1985 4235-4243 Disease denotes infected MESH:D007239
1986 4925-4933 Disease denotes COVID-19 MESH:C000657245
1987 5229-5248 Disease denotes respiratory failure MESH:D012131
1988 5784-5792 Disease denotes COVID-19 MESH:C000657245
1989 6168-6189 Disease denotes impaired lung lesions MESH:D009422
1990 6366-6374 Disease denotes COVID-19 MESH:C000657245
1991 6630-6638 Disease denotes COVID-19 MESH:C000657245
1993 1232-1240 Disease denotes COVID-19 MESH:C000657245
1996 7071-7075 Gene denotes ACE2 Gene:59272
1997 7139-7147 Disease denotes COVID-19 MESH:C000657245
2005 7227-7231 Gene denotes ACE2 Gene:59272
2006 7378-7382 Gene denotes ACE2 Gene:59272
2007 7448-7452 Gene denotes ACE2 Gene:59272
2008 7617-7621 Gene denotes ACE2 Gene:59272
2009 7692-7694 Gene denotes to Gene:6999
2010 7588-7590 Gene denotes to Gene:6999
2011 7575-7587 Disease denotes liver injury MESH:D017093
2018 7706-7710 Gene denotes ACE2 Gene:59272
2019 7712-7743 Gene denotes angiotensin-converting enzyme 2 Gene:59272
2020 7745-7748 Gene denotes BNP Gene:4879
2021 7778-7781 Gene denotes CRP Gene:1401
2022 7783-7801 Gene denotes C-reactive protein Gene:1401
2023 7836-7838 Gene denotes to Gene:6999
2051 434-452 Gene denotes C-reactive protein Gene:1401
2052 454-457 Gene denotes CRP Gene:1401
2053 507-510 Gene denotes CRP Gene:1401
2054 684-688 Gene denotes IL-6 Gene:3569
2055 764-774 Gene denotes cystatin C Gene:1471
2056 798-812 Gene denotes cholinesterase Gene:590
2057 1131-1135 Gene denotes ACE2 Gene:59272
2058 139-142 Gene denotes aid Gene:57379
2059 1095-1097 Gene denotes to Gene:6999
2060 916-918 Gene denotes to Gene:6999
2061 566-568 Gene denotes to Gene:6999
2062 531-533 Gene denotes to Gene:6999
2063 518-520 Gene denotes to Gene:6999
2064 317-319 Gene denotes to Gene:6999
2065 136-138 Gene denotes to Gene:6999
2066 69-71 Gene denotes to Gene:6999
2067 81-89 Species denotes patients Tax:9606
2068 277-285 Species denotes patients Tax:9606
2069 543-551 Species denotes patients Tax:9606
2070 1066-1074 Species denotes patients Tax:9606
2071 746-750 Chemical denotes urea MESH:D014508
2072 752-762 Chemical denotes creatinine MESH:D003404
2073 783-792 Chemical denotes bilirubin MESH:D001663
2074 534-542 Disease denotes COVID-19 MESH:C000657245
2075 575-591 Disease denotes viral infections MESH:D001102
2076 896-904 Disease denotes COVID-19 MESH:C000657245
2077 1057-1065 Disease denotes COVID-19 MESH:C000657245

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T314 0-208 Sentence denotes Several routine blood and serological parameters have been suggested to stratify patients who might be at higher risk for complications to aid in allocation of healthcare resources in the pandemic (Table 1 ).
T315 209-347 Sentence denotes Serologic markers from routine bloodwork were reported by comparing patients with mild or moderate symptoms to those with severe symptoms.
T316 348-477 Sentence denotes This includes different acute phase proteins, such as SAA (serum amyloid protein) and C-reactive protein (CRP) (Ji et al., 2020).
T317 478-592 Sentence denotes Interestingly, elevations in CRP appear to be unique to COVID-19 patients when compared to other viral infections.
T318 593-835 Sentence denotes Other consistently reported markers in non-survivors are increased procalcitonin (PCT) and IL-6 levels (Huang et al., 2020d), as well as increased serum urea, creatinine, cystatin C, direct bilirubin, and cholinesterase (Xiang et al., 2020a).
T319 836-984 Sentence denotes Overall, inflammatory markers are common in severe cases of COVID-19 and appear to correlate with the severity of the symptoms and clinical outcome.
T320 985-1166 Sentence denotes Moreover, the extensive damage that occurs in specific organs of severe COVID-19 patients is possibly related to differences in the expression of ACE2 (Figure 5 ) (Du et al., 2020).
T321 1167-1249 Sentence denotes Table 1 Routine Blood and Immunological Prognostic Biomarkers in COVID-19 Patients
T322 1250-1267 Sentence denotes Biomarker Purpose
T323 1268-1699 Sentence denotes Routine Bloodwork Lymphocyte count Predicted the disease severity and the outcomes of hospitalized patients (Tan et al., 2020a).Prognostic value was confirmed in numerous studies (Huang et al., 2020d, Liu et al., 2020b, Song et al., 2020, Wang et al., 2020f, Wynants et al., 2020, Yan et al., 2020b, Yang et al., 2020b, Zhang et al., 2020c, Zhao et al., 2020d).Decreased continuously in non-surviving patients (Wang et al., 2020b).
T324 1700-1973 Sentence denotes N/L Patients with N/L ≥3.13 were reported to be more likely to develop severe illness and to require ICU admission (Liu et al., 2020c).N/L on admission was a risk factor for short-term progression of patients with moderate pneumonia to severe pneumonia (Feng et al., 2020).
T325 1974-2103 Sentence denotes Confirmed to be of prognostic value in COVID-19 in several studies (Song et al., 2020, Wynants et al., 2020, Zhou et al., 2020d).
T326 2104-2180 Sentence denotes CRP Proposed as an early biomarker of disease progression (Ji et al., 2020).
T327 2181-2303 Sentence denotes Even in early stages, CRP levels were positively correlated with lung lesions and reflected disease severity (Wang, 2020).
T328 2304-2454 Sentence denotes Confirmed in numerous studies (Fu et al., 2020, Huang et al., 2020d, Wynants et al., 2020, Yan et al., 2020b, Zhao et al., 2020d, Zhou et al., 2020b).
T329 2455-2539 Sentence denotes Predicted the risk of acute myocardial injury (Liu et al., 2020g, Xu et al., 2020a).
T330 2540-2608 Sentence denotes LDH Higher in severe cases than in mild cases (Xiang et al., 2020a).
T331 2609-2745 Sentence denotes Widely proposed to have prognostic value in COVID-19 (Huang et al., 2020d, Wynants et al., 2020, Yan et al., 2020b, Zhao et al., 2020d).
T332 2746-2856 Sentence denotes D-dimer (and coagulation parameters) Predicted severity independently of other variables (Zhou et al., 2020d).
T333 2857-2964 Sentence denotes Elevated levels and disseminated intravascular coagulation are found in non-survivors (Wang et al., 2020b).
T334 2965-3038 Sentence denotes Identified patients at risk for acute cardiac injury (Liu et al., 2020g).
T335 3039-3242 Sentence denotes Other coagulation parameters, such as fibrin degradation product levels, longer prothrombin time, and activated partial thromboplastin time, were also associated with poor prognosis (Tang et al., 2020a).
T336 3243-3389 Sentence denotes SAA SAA was proposed to be used as an auxiliary index for diagnosis as it was elevated in 80% of the patients in a small cohort (Ji et al., 2020).
T337 3390-3559 Sentence denotes NT-proBNP (N-terminal pro B type natriuretic peptide) NT-proBNP was an independent risk factor of in-hospital death in patients with severe COVID-19 (Gao et al., 2020b).
T338 3560-3661 Sentence denotes Platelet count High platelet-to-lymphocyte ratio was associated with worse outcome (Qu et al., 2020).
T339 3662-3802 Sentence denotes Thrombocytopenia was associated with poor outcome and with incidence of myocardial injury in COVID-19 (Liu et al., 2020h, Shi et al., 2020).
T340 3803-3945 Sentence denotes Immunological CD4+, CD8+, and NK cell counts Lower CD4+, CD8+, and NK cells in PBMCs correlated with severity of COVID-19 (Nie et al., 2020b).
T341 3946-4017 Sentence denotes Validated by several studies (Wang et al., 2020f, Zheng et al., 2020b).
T342 4018-4209 Sentence denotes PD-1 and Tim-3 expression on T cells Increasing PD-1 and Tim-3 expression on T cells could be detected as patients progressed from prodromal to overtly symptomatic stages (Diao et al., 2020).
T343 4210-4361 Sentence denotes Expression was higher in infected patients versus healthy controls and in ICU versus non-ICU patients in both CD4 and CD8 T cells (Zhou et al., 2020b).
T344 4362-4686 Sentence denotes phenotypic changes in peripheral blood monocytes The presence of a distinct population of monocytes with high forward scatter (CD11b+, CD14+, CD16+, CD68+, CD80+, CD163+, and CD206+, which secrete IL-6, IL-10, and TNF-α) was identified in patients requiring prolonged hospitalization and ICU admission (Zhang et al., 2020c).
T345 4687-4764 Sentence denotes CD14+CD16+IL-6+ monocytes are increased in ICU patients (Zhou et al., 2020b).
T346 4765-4981 Sentence denotes IP-10, MCP-3, and IL-1ra IP-10, MCP-3, and IL-1ra were, among 48 examined cytokines, the only ones that closely associated with disease severity and outcome of COVID-19 in a study by Yang et al. (Yang et al., 2020b).
T347 4982-5175 Sentence denotes IL-6 Associated with disease severity (hospitalization and ICU admission) and poor prognosis (Chen et al., 2020g, Huang et al., 2020b, Liu et al., 2020b, Liu et al., 2020f, Wang et al., 2020b).
T348 5176-5269 Sentence denotes Increased levels were associated with higher risk of respiratory failure (Yao et al., 2020b).
T349 5270-5410 Sentence denotes IL-8 Positively correlated with disease severity (Chen et al., 2020e, Gong et al., 2020), with severe cases showing the highest IL-8 levels.
T350 5411-5628 Sentence denotes IL-10 Increased in severe or critical patients as compared to mild patients (Gong et al., 2020, Zhou et al., 2020d) without a statistically significant difference between severe and critical cases (Gong et al., 2020).
T351 5629-5822 Sentence denotes IL-2R Associated with disease severity in a study that, among other cytokines, also associated ferroprotein levels, PCT levels, and eosinophil counts with COVID-19 severity (Gong et al., 2020).
T352 5823-6002 Sentence denotes IL-1β CD14+IL-1β+ monocytes are abundant in early-recovery patients as shown in a single-cell RNA-seq analysis and thought to be associated with cytokine storm (Wen et al., 2020).
T353 6003-6137 Sentence denotes IL-1β did not correlate with disease severity in a cross-sectional study with mild, severe, and critical patients (Gong et al., 2020).
T354 6138-6282 Sentence denotes IL-4 IL-4 was associated with impaired lung lesions (Fu et al., 2020), but some reports point to a potential mediator effect (Wen et al., 2020).
T355 6283-6514 Sentence denotes IL-18 In modeling immune cell interaction between DCs and B cells in late recovery COVID-19 patients, IL-18 was found to be important in B cell production of antibodies, which suggests its importance in recovery (Wen et al., 2020).
T356 6515-6587 Sentence denotes GM-CSF GM-CSF+IFN-γ+ T cells are higher in ICU than in non-ICU patients.
T357 6588-6701 Sentence denotes CD14+CD16+GM-CSF+ monocytes are higher in COVID-19 patients as compared to healthy controls (Zhou et al., 2020b).
T358 6702-6802 Sentence denotes IL-2 and IFN-γ IL-2 and IFN-γ levels were shown to be increased in severe cases (Liu et al., 2020b).
T359 6803-6948 Sentence denotes anti-SARS-CoV-2 antibody levels Prolonged SARS-CoV-2 IgM positivity could be utilized as a predictive factor for poor recovery (Fu et al., 2020).
T360 6949-7061 Sentence denotes Higher anti-SARS-CoV-2 IgG levels and higher N/L were more commonly found in severe cases (Zhang et al., 2020a).
T361 7062-7161 Sentence denotes Figure 5 ACE2 Expression in Organs and Systems Most Frequently Implicated in COVID-19 Complications
T362 7162-7244 Sentence denotes The gastrointestinal tract, kidneys, and testis have the highest ACE2 expressions.
T363 7245-7603 Sentence denotes In some organs, different cell types have remarkably distinct expressions; e.g., in the lungs, alveolar epithelial cells have higher ACE2 expression levels than bronchial epithelial cells; in the liver, ACE2 is not expressed in hepatocytes, Kupffer cells, or endothelial cells but is detected in cholangiocytes, which can explain liver injury to some extent.
T364 7604-7705 Sentence denotes Furthermore, ACE2 expression is enriched on enterocytes of the small intestine compared to the colon.
T365 7706-7923 Sentence denotes ACE2, angiotensin-converting enzyme 2; BNP, B-type natriuretic peptide; CRP, C-reactive protein; IL, interleukin; N/L, neutrophil-to-lymphocyte ratio; PT, prothrombin time; aPTT, activated partial thromboplastin time.