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PMC:7200337 / 42851-43117 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T427 13-16 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T428 29-32 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T429 76-81 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T273 109-117 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T553 70-73 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T554 74-81 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T555 145-150 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T226 89-92 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1416 70-73 Gene denotes CD8 Gene:925
1417 159-163 Gene denotes GZMA Gene:3001
1418 165-169 Gene denotes GZMB Gene:3002
1419 175-179 Gene denotes GZMK Gene:3003
1420 204-209 Gene denotes KLRC1 Gene:3821
1421 214-218 Gene denotes XCL1 Gene:6375
1432 118-126 Species denotes patients Tax:9606
1439 109-117 Disease denotes COVID-19 MESH:C000657245

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T230 0-266 Sentence denotes Accordingly, RNA sequencing (RNA-seq) data by Liao et al. showed that CD8 T cells in the BAL fluid of severe COVID-19 patients express cytotoxic genes such as GZMA, GZMB, and GZMK at higher levels, while KLRC1 and XCL1 are enriched in mild cases (Liao et al., 2020).