PMC:7200337 / 28826-29513
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T285 | 2-7 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T286 | 59-64 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T287 | 75-79 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T288 | 89-97 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
| T289 | 154-159 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T290 | 175-180 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T291 | 195-200 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T292 | 253-257 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T293 | 334-338 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T294 | 458-463 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T295 | 493-499 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
| T296 | 559-564 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T33 | 493-499 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T194 | 35-51 | Disease | denotes | viral infections | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T195 | 352-360 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T196 | 363-372 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T197 | 525-533 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T313 | 0-7 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cells |
| T314 | 13-14 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T315 | 53-56 | http://purl.obolibrary.org/obo/PR_000001004 | denotes | CD4 |
| T316 | 57-64 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cells |
| T317 | 73-79 | http://purl.obolibrary.org/obo/CL_0000236 | denotes | B cell |
| T318 | 154-159 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T319 | 169-172 | http://purl.obolibrary.org/obo/CLO_0053438 | denotes | CD8 |
| T61712 | 173-180 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cells |
| T321 | 195-200 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T322 | 251-257 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
| T323 | 332-338 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
| T324 | 456-463 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cells |
| T325 | 475-480 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T326 | 557-564 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cells |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T118 | 35-51 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infections |
| T119 | 89-108 | http://purl.obolibrary.org/obo/GO_0002377 | denotes | antibody production |
| T120 | 550-556 | http://purl.obolibrary.org/obo/GO_0007613 | denotes | memory |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 932 | 53-56 | Gene | denotes | CD4 | Gene:920 |
| 933 | 169-172 | Gene | denotes | CD8 | Gene:925 |
| 934 | 677-679 | Gene | denotes | to | Gene:6999 |
| 935 | 599-601 | Gene | denotes | to | Gene:6999 |
| 936 | 464-466 | Gene | denotes | to | Gene:6999 |
| 937 | 299-301 | Gene | denotes | To | Gene:6999 |
| 938 | 201-203 | Gene | denotes | to | Gene:6999 |
| 939 | 35-51 | Disease | denotes | viral infections | MESH:D001102 |
| 940 | 186-194 | Disease | denotes | infected | MESH:D007239 |
| 941 | 352-372 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
| 942 | 525-533 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 943 | 550-558 | Disease | denotes | memory T | MESH:D008569 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T162 | 0-228 | Sentence | denotes | T cells play a fundamental role in viral infections: CD4 T cells provide B cell help for antibody production and orchestrate the response of other immune cells, whereas CD8 T cells kill infected cells to reduce the viral burden. |
| T163 | 229-298 | Sentence | denotes | However, dysregulated T cell responses can result in immunopathology. |
| T164 | 299-639 | Sentence | denotes | To better understand the role of T cell responses in SARS-CoV-2 infection, the pursuit of two major questions is imperative: (1) what is the contribution of T cells to initial virus control and tissue damage in the context of COVID-19, and (2) how do memory T cells established thereafter contribute to protective immunity upon reinfection? |
| T165 | 640-687 | Sentence | denotes | Some tentative answers are beginning to emerge. |