PMC:7200337 / 102047-103276 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
32505227-32253318-46575443 502-506 32253318 denotes 2020
32505227-32281317-46575444 1139-1143 32281317 denotes 2020
T98365 502-506 32253318 denotes 2020
T99026 1139-1143 32281317 denotes 2020

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T5 41-47 Body_part denotes Plasma http://purl.org/sig/ont/fma/fma62970
T6 216-220 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T7 507-512 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T8 538-548 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T9 695-703 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T10 891-896 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T11 1163-1168 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T100 507-512 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T101 891-896 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T102 1163-1168 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T587 59-67 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T588 573-588 Disease denotes lymphocytopenia http://purl.obolibrary.org/obo/MONDO_0003783
T589 637-645 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T24 41-47 http://purl.obolibrary.org/obo/UBERON_0001969 denotes Plasma
T25 110-112 http://purl.obolibrary.org/obo/PR_000005794 denotes CP
T26 164-166 http://purl.obolibrary.org/obo/CLO_0009715 denotes yo
T27 183-185 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T28 419-421 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T29 425-427 http://purl.obolibrary.org/obo/CLO_0009715 denotes yo
T30 507-512 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T31 602-606 http://purl.obolibrary.org/obo/CLO_0008947 denotes SaO2
T32 602-606 http://purl.obolibrary.org/obo/CLO_0050140 denotes SaO2
T33 752-754 http://purl.obolibrary.org/obo/CLO_0009715 denotes yo
T34 791-793 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T35 891-896 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T36 957-959 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T37 1002-1004 http://purl.obolibrary.org/obo/PR_000005794 denotes CP
T38 1083-1085 http://purl.obolibrary.org/obo/CLO_0054055 denotes 71
T39 1086-1088 http://purl.obolibrary.org/obo/CLO_0009715 denotes yo
T40 1099-1101 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T41 1163-1168 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T42 1181-1183 http://purl.obolibrary.org/obo/CLO_0009715 denotes yo

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T51573 110-112 Chemical denotes CP http://purl.obolibrary.org/obo/CHEBI_3380|http://purl.obolibrary.org/obo/CHEBI_73461
T93279 1002-1004 Chemical denotes CP http://purl.obolibrary.org/obo/CHEBI_3380|http://purl.obolibrary.org/obo/CHEBI_73461

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T58 573-588 Phenotype denotes lymphocytopenia http://purl.obolibrary.org/obo/HP_0001888
T59 648-655 Phenotype denotes viremia http://purl.obolibrary.org/obo/HP_0020071

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 759-770 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
3362 1002-1004 Gene denotes CP Gene:1356
3363 110-112 Gene denotes CP Gene:1356
3364 77-84 Species denotes Patient Tax:9606
3365 148-156 Species denotes patients Tax:9606
3366 268-276 Species denotes patients Tax:9606
3367 409-417 Species denotes patients Tax:9606
3368 559-567 Species denotes patients Tax:9606
3369 614-622 Species denotes patients Tax:9606
3370 661-669 Species denotes patients Tax:9606
3371 716-724 Species denotes patients Tax:9606
3372 736-744 Species denotes patients Tax:9606
3373 920-927 Species denotes patient Tax:9606
3374 940-948 Species denotes patients Tax:9606
3375 1048-1056 Species denotes patients Tax:9606
3376 1066-1074 Species denotes patients Tax:9606
3377 378-381 Chemical denotes nAb
3378 573-588 Disease denotes lymphocytopenia MESH:D008231
3379 637-655 Disease denotes SARS-CoV-2 viremia MESH:C000657245
3381 59-67 Disease denotes COVID-19 MESH:C000657245

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T598 0-76 Sentence denotes Table 4 Clinical Studies of Convalescent Plasma Therapy in COVID-19 Patients
T599 77-138 Sentence denotes Patient Characteristics Start of CP Therapy Results Reference
T600 139-294 Sentence denotes 5 severe patients (30–70 yo) between 10 and 22 days after hospital admission body temperature normalized within 3 days in 4 of 5 patients Shen et al., 2020
T601 295-315 Sentence denotes clinical improvement
T602 316-377 Sentence denotes viral loads became negative within 12 days of the transfusion
T603 378-398 Sentence denotes nAb titers increased
T604 399-506 Sentence denotes 10 severe patients (34–78 yo) median 16.5 dpo disappearance of clinical symptoms after 3d Duan et al., 2020
T605 507-524 Sentence denotes chest CT improved
T606 525-589 Sentence denotes elevation of lymphocyte counts in patients with lymphocytopenia.
T607 590-622 Sentence denotes increase in SaO2 in all patients
T608 623-669 Sentence denotes resolution of SARS-CoV-2 viremia in 7 patients
T609 670-724 Sentence denotes increase in neutralizing antibody titers in 5 patients
T610 725-871 Sentence denotes 4 critical patients (31–73 yo) at degradation of symptoms,between 11 and 19 days after hospital admission clinical improvement Zhang et al., 2020b
T611 872-890 Sentence denotes reduced viral load
T612 891-908 Sentence denotes chest CT improved
T613 909-1021 Sentence denotes 1 moderate patient, 2 critical patients 12 dpo, 27 dpo viral detection negative 4 days after CP Pei et al., 2020
T614 1022-1056 Sentence denotes clinical improvement of 2 patients
T615 1057-1143 Sentence denotes 2 severe patients (67 and 71 yo) 7 dpo or 22 dpo clinical improvement Ahn et al., 2020
T616 1144-1162 Sentence denotes reduced viral load
T617 1163-1180 Sentence denotes chest CT improved
T618 1181-1229 Sentence denotes yo, years old; dpo, days post onset of symptoms.