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PMC:7199903 / 880-1066 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T7 48-55 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T7 31-39 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T8 105-152 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T9 105-138 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T10 154-162 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T5 48-55 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T10 18-23 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T131 0-3 DT denotes all
T132 4-17 NN denotes glycosylation
T133 18-23 NNS denotes sites
T134 24-26 IN denotes on
T135 27-30 DT denotes the
T136 31-41 NN denotes SARS-CoV-2
T137 42-47 NN denotes spike
T138 48-55 NN denotes protein
T139 58-66 NN denotes Abstract
T140 67-70 DT denotes The
T141 71-80 NN denotes emergence
T142 81-83 IN denotes of
T143 84-87 DT denotes the
T144 88-103 NN denotes betacoronavirus
T145 103-104 -COMMA- denotes ,
T146 105-111 JJ denotes severe
T147 112-117 JJ denotes acute
T148 118-129 JJ denotes respiratory
T149 130-138 NN denotes syndrome
T150 139-150 NN denotes coronavirus
T151 151-152 CD denotes 2
T152 153-154 -LRB- denotes (
T153 154-164 NN denotes SARS-CoV-2
T154 164-165 -RRB- denotes )
T155 165-166 -COMMA- denotes ,
T156 167-170 DT denotes the
T157 171-180 JJ denotes causative
T158 181-186 NN denotes agent
R135 T133 T131 arg1Of sites,all
R136 T133 T132 arg1Of sites,glycosylation
R137 T133 T134 arg1Of sites,on
R138 T138 T134 arg2Of protein,on
R139 T138 T135 arg1Of protein,the
R140 T138 T136 arg1Of protein,SARS-CoV-2
R141 T138 T137 arg1Of protein,spike
R142 T141 T140 arg1Of emergence,The
R143 T141 T142 arg1Of emergence,of
R144 T144 T142 arg2Of betacoronavirus,of
R145 T144 T143 arg1Of betacoronavirus,the
R146 T144 T145 arg1Of betacoronavirus,","
R147 T150 T145 arg2Of coronavirus,","
R148 T150 T146 arg1Of coronavirus,severe
R149 T150 T147 arg1Of coronavirus,acute
R150 T150 T148 arg1Of coronavirus,respiratory
R151 T150 T149 arg1Of coronavirus,syndrome
R152 T150 T151 arg1Of coronavirus,2
R153 T150 T152 arg1Of coronavirus,(
R154 T153 T152 arg2Of SARS-CoV-2,(
R155 T154 T152 arg3Of ),(
R156 T141 T155 arg1Of emergence,","
R157 T158 T155 arg2Of agent,","
R158 T158 T156 arg1Of agent,the
R159 T158 T157 arg1Of agent,causative

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T7 48-55 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T4 48-55 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T5 31-41 Species denotes SARS-CoV-2 NCBItxid:2697049
T6 88-103 Species denotes betacoronavirus NCBItxid:694002
T7 105-152 Species denotes severe acute respiratory syndrome coronavirus 2 NCBItxid:2697049
T8 154-164 Species denotes SARS-CoV-2 NCBItxid:2697049

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T11 58-66 Sentence denotes Abstract

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T6 31-41 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096
T7 105-152 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T8 154-164 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
29 42-47 Gene denotes spike Gene:43740568
30 31-41 Species denotes SARS-CoV-2 Tax:2697049
54 88-103 Species denotes betacoronavirus Tax:694002
55 105-152 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
56 154-164 Species denotes SARS-CoV-2 Tax:2697049

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3 42-55 Protein denotes spike protein https://www.uniprot.org/uniprot/P31340

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T2 4-17 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T2 4-17 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T2 4-17 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T11 58-66 Sentence denotes Abstract

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
29 42-47 Gene denotes spike Gene:43740568
30 31-41 Species denotes SARS-CoV-2 Tax:2697049
54 88-103 Species denotes betacoronavirus Tax:694002
55 105-152 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
56 154-164 Species denotes SARS-CoV-2 Tax:2697049