PMC:7199903 / 1956-2226 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T12","span":{"begin":114,"end":121},"obj":"Body_part"},{"id":"T13","span":{"begin":226,"end":230},"obj":"Body_part"},{"id":"T14","span":{"begin":248,"end":255},"obj":"Body_part"}],"attributes":[{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A13","pred":"fma_id","subj":"T13","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A14","pred":"fma_id","subj":"T14","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T19","span":{"begin":49,"end":58},"obj":"Disease"},{"id":"T20","span":{"begin":60,"end":68},"obj":"Disease"}],"attributes":[{"id":"A19","pred":"mondo_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A20","pred":"mondo_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T20","span":{"begin":226,"end":230},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T21","span":{"begin":259,"end":260},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T10","span":{"begin":114,"end":121},"obj":"Chemical"},{"id":"T11","span":{"begin":171,"end":182},"obj":"Chemical"},{"id":"T12","span":{"begin":248,"end":255},"obj":"Chemical"}],"attributes":[{"id":"A10","pred":"chebi_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A11","pred":"chebi_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_48433"},{"id":"A12","pred":"chebi_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T18","span":{"begin":221,"end":225},"obj":"http://purl.obolibrary.org/obo/IDO_0000531"},{"id":"T19","span":{"begin":226,"end":230},"obj":"http://purl.obolibrary.org/obo/CL_0000000"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-sample-Enju","denotations":[{"id":"T306","span":{"begin":0,"end":1},"obj":"-COMMA-"},{"id":"T307","span":{"begin":2,"end":9},"obj":"VBZ"},{"id":"T308","span":{"begin":10,"end":15},"obj":"NN"},{"id":"T309","span":{"begin":15,"end":16},"obj":"-COMMA-"},{"id":"T310","span":{"begin":17,"end":23},"obj":"JJ"},{"id":"T311","span":{"begin":24,"end":35},"obj":"JJ"},{"id":"T312","span":{"begin":36,"end":43},"obj":"NN"},{"id":"T313","span":{"begin":43,"end":44},"obj":"-COMMA-"},{"id":"T314","span":{"begin":45,"end":48},"obj":"CC"},{"id":"T315","span":{"begin":49,"end":58},"obj":"NN"},{"id":"T316","span":{"begin":60,"end":70},"obj":"NN"},{"id":"T317","span":{"begin":71,"end":75},"obj":"VBZ"},{"id":"T318","span":{"begin":76,"end":78},"obj":"DT"},{"id":"T319","span":{"begin":79,"end":90},"obj":"RB"},{"id":"T320","span":{"begin":91,"end":103},"obj":"VBN"},{"id":"T321","span":{"begin":104,"end":109},"obj":"NN"},{"id":"T322","span":{"begin":110,"end":111},"obj":"-LRB-"},{"id":"T323","span":{"begin":111,"end":112},"obj":"NN"},{"id":"T324","span":{"begin":112,"end":113},"obj":"-RRB-"},{"id":"T325","span":{"begin":114,"end":121},"obj":"NN"},{"id":"T326","span":{"begin":122,"end":126},"obj":"WDT"},{"id":"T327","span":{"begin":127,"end":136},"obj":"VBZ"},{"id":"T328","span":{"begin":137,"end":141},"obj":"IN"},{"id":"T329","span":{"begin":142,"end":145},"obj":"DT"},{"id":"T330","span":{"begin":146,"end":151},"obj":"JJ"},{"id":"T331","span":{"begin":152,"end":159},"obj":"NN"},{"id":"T332","span":{"begin":160,"end":162},"obj":"TO"},{"id":"T333","span":{"begin":163,"end":167},"obj":"VB"},{"id":"T334","span":{"begin":168,"end":170},"obj":"TO"},{"id":"T335","span":{"begin":171,"end":193},"obj":"JJ"},{"id":"T336","span":{"begin":194,"end":200},"obj":"NN"},{"id":"T337","span":{"begin":201,"end":202},"obj":"CD"},{"id":"T338","span":{"begin":203,"end":204},"obj":"-LRB-"},{"id":"T339","span":{"begin":204,"end":208},"obj":"NN"},{"id":"T340","span":{"begin":208,"end":209},"obj":"-RRB-"},{"id":"T341","span":{"begin":210,"end":212},"obj":"TO"},{"id":"T342","span":{"begin":213,"end":220},"obj":"VB"},{"id":"T343","span":{"begin":221,"end":230},"obj":"JJ"},{"id":"T344","span":{"begin":231,"end":236},"obj":"NN"},{"id":"T345","span":{"begin":237,"end":238},"obj":"-LRB-"},{"id":"T346","span":{"begin":238,"end":239},"obj":"CD"},{"id":"T347","span":{"begin":239,"end":240},"obj":"-RRB-"},{"id":"T348","span":{"begin":242,"end":245},"obj":"DT"},{"id":"T349","span":{"begin":246,"end":247},"obj":"NN"},{"id":"T350","span":{"begin":248,"end":255},"obj":"NN"},{"id":"T351","span":{"begin":256,"end":258},"obj":"VBZ"},{"id":"T352","span":{"begin":259,"end":260},"obj":"DT"},{"id":"T353","span":{"begin":261,"end":269},"obj":"JJ"}],"relations":[{"id":"R317","pred":"arg1Of","subj":"T325","obj":"T318"},{"id":"R318","pred":"arg1Of","subj":"T320","obj":"T319"},{"id":"R319","pred":"arg1Of","subj":"T321","obj":"T320"},{"id":"R320","pred":"arg1Of","subj":"T325","obj":"T321"},{"id":"R321","pred":"arg1Of","subj":"T321","obj":"T322"},{"id":"R322","pred":"arg2Of","subj":"T323","obj":"T322"},{"id":"R323","pred":"arg3Of","subj":"T324","obj":"T322"},{"id":"R324","pred":"arg1Of","subj":"T325","obj":"T326"},{"id":"R325","pred":"arg1Of","subj":"T325","obj":"T327"},{"id":"R326","pred":"arg1Of","subj":"T327","obj":"T328"},{"id":"R304","pred":"arg1Of","subj":"T307","obj":"T306"},{"id":"R306","pred":"arg2Of","subj":"T314","obj":"T307"},{"id":"R307","pred":"arg1Of","subj":"T308","obj":"T309"},{"id":"R308","pred":"arg2Of","subj":"T312","obj":"T309"},{"id":"R309","pred":"arg1Of","subj":"T312","obj":"T310"},{"id":"R310","pred":"arg1Of","subj":"T312","obj":"T311"},{"id":"R311","pred":"arg1Of","subj":"T314","obj":"T313"},{"id":"R312","pred":"arg1Of","subj":"T309","obj":"T314"},{"id":"R313","pred":"arg2Of","subj":"T315","obj":"T314"},{"id":"R314","pred":"arg1Of","subj":"T316","obj":"T317"},{"id":"R315","pred":"arg2Of","subj":"T325","obj":"T317"},{"id":"R316","pred":"arg3Of","subj":"T333","obj":"T317"},{"id":"R327","pred":"arg2Of","subj":"T331","obj":"T328"},{"id":"R328","pred":"arg1Of","subj":"T331","obj":"T329"},{"id":"R329","pred":"arg1Of","subj":"T331","obj":"T330"},{"id":"R330","pred":"arg1Of","subj":"T333","obj":"T332"},{"id":"R331","pred":"arg1Of","subj":"T316","obj":"T333"},{"id":"R332","pred":"arg1Of","subj":"T333","obj":"T334"},{"id":"R333","pred":"arg2Of","subj":"T336","obj":"T334"},{"id":"R334","pred":"arg1Of","subj":"T336","obj":"T335"},{"id":"R335","pred":"arg1Of","subj":"T336","obj":"T337"},{"id":"R336","pred":"arg1Of","subj":"T336","obj":"T338"},{"id":"R337","pred":"arg2Of","subj":"T339","obj":"T338"},{"id":"R338","pred":"arg3Of","subj":"T340","obj":"T338"},{"id":"R339","pred":"arg1Of","subj":"T342","obj":"T341"},{"id":"R340","pred":"modOf","subj":"T333","obj":"T341"},{"id":"R341","pred":"arg2Of","subj":"T344","obj":"T342"},{"id":"R342","pred":"arg1Of","subj":"T344","obj":"T343"},{"id":"R343","pred":"arg1Of","subj":"T344","obj":"T345"},{"id":"R344","pred":"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induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T12","span":{"begin":114,"end":121},"obj":"Body_part"},{"id":"T13","span":{"begin":226,"end":230},"obj":"Body_part"},{"id":"T14","span":{"begin":248,"end":255},"obj":"Body_part"}],"attributes":[{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A13","pred":"fma_id","subj":"T13","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A14","pred":"fma_id","subj":"T14","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T8","span":{"begin":114,"end":121},"obj":"Chemical"},{"id":"T9","span":{"begin":171,"end":182},"obj":"Chemical"},{"id":"T10","span":{"begin":248,"end":255},"obj":"Chemical"}],"attributes":[{"id":"A8","pred":"chebi_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A9","pred":"chebi_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/CHEBI_48433"},{"id":"A10","pred":"chebi_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T18","span":{"begin":60,"end":70},"obj":"Species"}],"attributes":[{"id":"A18","pred":"ncbi_taxonomy_id","subj":"T18","obj":"NCBItxid:2697049"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-sample-sentences","denotations":[{"id":"T19","span":{"begin":60,"end":241},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T17","span":{"begin":49,"end":58},"obj":"Disease"},{"id":"T18","span":{"begin":60,"end":70},"obj":"Disease"}],"attributes":[{"id":"A17","pred":"mondo_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A18","pred":"mondo_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"100","span":{"begin":24,"end":43},"obj":"Disease"},{"id":"101","span":{"begin":49,"end":58},"obj":"Disease"},{"id":"85","span":{"begin":104,"end":109},"obj":"Gene"},{"id":"86","span":{"begin":111,"end":112},"obj":"Gene"},{"id":"87","span":{"begin":171,"end":202},"obj":"Gene"},{"id":"88","span":{"begin":204,"end":208},"obj":"Gene"},{"id":"91","span":{"begin":246,"end":255},"obj":"Gene"},{"id":"95","span":{"begin":60,"end":70},"obj":"Species"},{"id":"99","span":{"begin":10,"end":15},"obj":"Disease"}],"attributes":[{"id":"A99","pred":"pubann:denotes","subj":"99","obj":"MESH:D005334"},{"id":"A88","pred":"pubann:denotes","subj":"88","obj":"Gene:59272"},{"id":"A91","pred":"pubann:denotes","subj":"91","obj":"Gene:43740568"},{"id":"A86","pred":"pubann:denotes","subj":"86","obj":"Gene:43740568"},{"id":"A95","pred":"pubann:denotes","subj":"95","obj":"Tax:2697049"},{"id":"A101","pred":"pubann:denotes","subj":"101","obj":"MESH:D011014"},{"id":"A85","pred":"pubann:denotes","subj":"85","obj":"Gene:43740568"},{"id":"A87","pred":"pubann:denotes","subj":"87","obj":"Gene:59272"},{"id":"A100","pred":"pubann:denotes","subj":"100","obj":"MESH:D012140"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

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induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-sample-PD-HP","denotations":[{"id":"T2","span":{"begin":24,"end":43},"obj":"Phenotype"},{"id":"T3","span":{"begin":49,"end":58},"obj":"Phenotype"},{"id":"T1","span":{"begin":10,"end":15},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0002086"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0002090"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T1","span":{"begin":10,"end":15},"obj":"Phenotype"},{"id":"T2","span":{"begin":24,"end":43},"obj":"Phenotype"},{"id":"T3","span":{"begin":49,"end":58},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0002086"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0002090"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-sentences","denotations":[{"id":"T19","span":{"begin":60,"end":241},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}

{"project":"LitCovid-PubTator","denotations":[{"id":"85","span":{"begin":104,"end":109},"obj":"Gene"},{"id":"86","span":{"begin":111,"end":112},"obj":"Gene"},{"id":"87","span":{"begin":171,"end":202},"obj":"Gene"},{"id":"88","span":{"begin":204,"end":208},"obj":"Gene"},{"id":"91","span":{"begin":246,"end":255},"obj":"Gene"},{"id":"95","span":{"begin":60,"end":70},"obj":"Species"},{"id":"99","span":{"begin":10,"end":15},"obj":"Disease"},{"id":"100","span":{"begin":24,"end":43},"obj":"Disease"},{"id":"101","span":{"begin":49,"end":58},"obj":"Disease"}],"attributes":[{"id":"A85","pred":"tao:has_database_id","subj":"85","obj":"Gene:43740568"},{"id":"A86","pred":"tao:has_database_id","subj":"86","obj":"Gene:43740568"},{"id":"A87","pred":"tao:has_database_id","subj":"87","obj":"Gene:59272"},{"id":"A88","pred":"tao:has_database_id","subj":"88","obj":"Gene:59272"},{"id":"A91","pred":"tao:has_database_id","subj":"91","obj":"Gene:43740568"},{"id":"A95","pred":"tao:has_database_id","subj":"95","obj":"Tax:2697049"},{"id":"A99","pred":"tao:has_database_id","subj":"99","obj":"MESH:D005334"},{"id":"A100","pred":"tao:has_database_id","subj":"100","obj":"MESH:D012140"},{"id":"A101","pred":"tao:has_database_id","subj":"101","obj":"MESH:D011014"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":", induces fever, severe respiratory illness, and pneumonia. SARS-CoV-2 uses an extensively glycosylated spike (S) protein that protrudes from the viral surface to bind to angiotensin-converting enzyme 2 (ACE2) to mediate host-cell entry (3). The S protein is a trimeric "}