PMC:7199903 / 13877-14194
Annnotations
LitCovid-PD-FMA-UBERON
{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T72","span":{"begin":36,"end":39},"obj":"Body_part"},{"id":"T73","span":{"begin":130,"end":134},"obj":"Body_part"},{"id":"T74","span":{"begin":275,"end":282},"obj":"Body_part"}],"attributes":[{"id":"A72","pred":"fma_id","subj":"T72","obj":"http://purl.org/sig/ont/fma/fma278683"},{"id":"A73","pred":"fma_id","subj":"T73","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A74","pred":"fma_id","subj":"T74","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-PD-CLO
{"project":"LitCovid-PD-CLO","denotations":[{"id":"T83","span":{"begin":130,"end":134},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T84","span":{"begin":313,"end":315},"obj":"http://purl.obolibrary.org/obo/CLO_0001313"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-PD-CHEBI
{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T144","span":{"begin":96,"end":103},"obj":"Chemical"},{"id":"T145","span":{"begin":176,"end":183},"obj":"Chemical"},{"id":"T146","span":{"begin":275,"end":282},"obj":"Chemical"}],"attributes":[{"id":"A144","pred":"chebi_id","subj":"T144","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A145","pred":"chebi_id","subj":"T145","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A146","pred":"chebi_id","subj":"T146","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-sample-PD-IDO
{"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T63","span":{"begin":130,"end":134},"obj":"http://purl.obolibrary.org/obo/CL_0000000"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-sample-Enju
{"project":"LitCovid-sample-Enju","denotations":[{"id":"T97181","span":{"begin":0,"end":2},"obj":"PRP"},{"id":"T55441","span":{"begin":3,"end":7},"obj":"VBP"},{"id":"T9573","span":{"begin":8,"end":18},"obj":"RB"},{"id":"T58273","span":{"begin":19,"end":31},"obj":"VBN"},{"id":"T28968","span":{"begin":32,"end":35},"obj":"IN"},{"id":"T34125","span":{"begin":36,"end":41},"obj":"NN"},{"id":"T85697","span":{"begin":42,"end":45},"obj":"NN"},{"id":"T43925","span":{"begin":46,"end":59},"obj":"NN"},{"id":"T72928","span":{"begin":60,"end":64},"obj":"IN"},{"id":"T20432","span":{"begin":65,"end":68},"obj":"DT"},{"id":"T74575","span":{"begin":69,"end":79},"obj":"NN"},{"id":"T86628","span":{"begin":80,"end":82},"obj":"IN"},{"id":"T60989","span":{"begin":83,"end":95},"obj":"JJ"},{"id":"T13027","span":{"begin":96,"end":103},"obj":"NNS"},{"id":"T11801","span":{"begin":104,"end":106},"obj":"VBZ"},{"id":"T93111","span":{"begin":107,"end":113},"obj":"VBN"},{"id":"T68502","span":{"begin":114,"end":116},"obj":"IN"},{"id":"T25582","span":{"begin":117,"end":120},"obj":"DT"},{"id":"T45914","span":{"begin":121,"end":129},"obj":"NN"},{"id":"T65172","span":{"begin":130,"end":134},"obj":"NN"},{"id":"T99350","span":{"begin":135,"end":138},"obj":"CC"},{"id":"T88282","span":{"begin":139,"end":143},"obj":"IN"},{"id":"T3049","span":{"begin":144,"end":147},"obj":"DT"},{"id":"T57577","span":{"begin":148,"end":154},"obj":"NNS"},{"id":"T64683","span":{"begin":155,"end":157},"obj":"IN"},{"id":"T18565","span":{"begin":158,"end":175},"obj":"JJ"},{"id":"T45265","span":{"begin":176,"end":183},"obj":"NNS"},{"id":"T16371","span":{"begin":184,"end":188},"obj":"VBD"},{"id":"T17100","span":{"begin":189,"end":196},"obj":"RB"},{"id":"T68235","span":{"begin":197,"end":208},"obj":"JJ"},{"id":"T82363","span":{"begin":209,"end":211},"obj":"IN"},{"id":"T15827","span":{"begin":212,"end":215},"obj":"DT"},{"id":"T31780","span":{"begin":216,"end":226},"obj":"NN"},{"id":"T24822","span":{"begin":227,"end":233},"obj":"NN"},{"id":"T93088","span":{"begin":234,"end":237},"obj":"CC"},{"id":"T37436","span":{"begin":238,"end":241},"obj":"VBP"},{"id":"T64666","span":{"begin":242,"end":246},"obj":"RB"},{"id":"T48018","span":{"begin":247,"end":251},"obj":"RBR"},{"id":"T54557","span":{"begin":252,"end":259},"obj":"RB"},{"id":"T92543","span":{"begin":260,"end":267},"obj":"JJ"},{"id":"T5056","span":{"begin":268,"end":270},"obj":"TO"},{"id":"T95680","span":{"begin":271,"end":274},"obj":"DT"},{"id":"T83467","span":{"begin":275,"end":282},"obj":"NN"},{"id":"T6736","span":{"begin":283,"end":292},"obj":"NN"},{"id":"T70311","span":{"begin":293,"end":296},"obj":"CC"},{"id":"T36895","span":{"begin":297,"end":303},"obj":"NN"},{"id":"T93693","span":{"begin":304,"end":311},"obj":"NN"},{"id":"T72545","span":{"begin":312,"end":313},"obj":"-LRB-"},{"id":"T3335","span":{"begin":313,"end":315},"obj":"CD"},{"id":"T19113","span":{"begin":315,"end":316},"obj":"-RRB-"}],"relations":[{"id":"R63094","pred":"arg1Of","subj":"T48018","obj":"T64666"},{"id":"R5963","pred":"arg1Of","subj":"T92543","obj":"T48018"},{"id":"R17467","pred":"arg1Of","subj":"T92543","obj":"T54557"},{"id":"R93728","pred":"arg1Of","subj":"T57577","obj":"T92543"},{"id":"R75227","pred":"arg1Of","subj":"T92543","obj":"T5056"},{"id":"R97368","pred":"arg2Of","subj":"T70311","obj":"T5056"},{"id":"R28855","pred":"arg1Of","subj":"T6736","obj":"T95680"},{"id":"R68944","pred":"arg1Of","subj":"T6736","obj":"T83467"},{"id":"R59661","pred":"arg1Of","subj":"T6736","obj":"T70311"},{"id":"R27972","pred":"arg2Of","subj":"T93693","obj":"T70311"},{"id":"R58434","pred":"arg1Of","subj":"T93693","obj":"T36895"},{"id":"R9247","pred":"arg1Of","subj":"T93693","obj":"T72545"},{"id":"R76485","pred":"arg2Of","subj":"T3335","obj":"T72545"},{"id":"R37324","pred":"arg3Of","subj":"T19113","obj":"T72545"},{"id":"R14220","pred":"arg1Of","subj":"T97181","obj":"T55441"},{"id":"R97683","pred":"arg2Of","subj":"T58273","obj":"T55441"},{"id":"R24011","pred":"arg1Of","subj":"T58273","obj":"T9573"},{"id":"R78803","pred":"arg1Of","subj":"T97181","obj":"T58273"},{"id":"R20525","pred":"arg2Of","subj":"T99350","obj":"T58273"},{"id":"R78593","pred":"arg1Of","subj":"T58273","obj":"T28968"},{"id":"R99891","pred":"arg2Of","subj":"T43925","obj":"T28968"},{"id":"R13650","pred":"arg1Of","subj":"T43925","obj":"T34125"},{"id":"R31307","pred":"arg1Of","subj":"T43925","obj":"T85697"},{"id":"R78477","pred":"arg1Of","subj":"T93111","obj":"T72928"},{"id":"R26231","pred":"arg1Of","subj":"T74575","obj":"T20432"},{"id":"R77353","pred":"arg1Of","subj":"T74575","obj":"T86628"},{"id":"R99911","pred":"arg2Of","subj":"T13027","obj":"T86628"},{"id":"R5099","pred":"arg1Of","subj":"T13027","obj":"T60989"},{"id":"R9381","pred":"arg1Of","subj":"T74575","obj":"T11801"},{"id":"R32118","pred":"arg2Of","subj":"T93111","obj":"T11801"},{"id":"R77992","pred":"arg1Of","subj":"T65172","obj":"T93111"},{"id":"R20715","pred":"arg2Of","subj":"T74575","obj":"T93111"},{"id":"R46329","pred":"arg2Of","subj":"T65172","obj"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have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-sample-PD-FMA
{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T73","span":{"begin":275,"end":282},"obj":"Body_part"},{"id":"T71","span":{"begin":36,"end":39},"obj":"Body_part"},{"id":"T72","span":{"begin":130,"end":134},"obj":"Body_part"}],"attributes":[{"id":"A71","pred":"fma_id","subj":"T71","obj":"http://purl.org/sig/ont/fma/fma278683"},{"id":"A72","pred":"fma_id","subj":"T72","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A73","pred":"fma_id","subj":"T73","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-sample-CHEBI
{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T109","span":{"begin":96,"end":103},"obj":"Chemical"},{"id":"T110","span":{"begin":176,"end":183},"obj":"Chemical"},{"id":"T111","span":{"begin":275,"end":282},"obj":"Chemical"}],"attributes":[{"id":"A109","pred":"chebi_id","subj":"T109","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A110","pred":"chebi_id","subj":"T110","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A111","pred":"chebi_id","subj":"T111","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-sample-PD-NCBITaxon
{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T54","span":{"begin":36,"end":41},"obj":"Species"}],"attributes":[{"id":"A54","pred":"ncbi_taxonomy_id","subj":"T54","obj":"NCBItxid:11676"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-sample-sentences
{"project":"LitCovid-sample-sentences","denotations":[{"id":"T92","span":{"begin":0,"end":317},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-sample-Pubtator
{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"465","span":{"begin":96,"end":103},"obj":"Chemical"},{"id":"466","span":{"begin":158,"end":170},"obj":"Chemical"},{"id":"467","span":{"begin":176,"end":183},"obj":"Chemical"},{"id":"468","span":{"begin":297,"end":303},"obj":"Chemical"},{"id":"469","span":{"begin":36,"end":59},"obj":"Disease"}],"attributes":[{"id":"A465","pred":"pubann:denotes","subj":"465","obj":"MESH:D011134"},{"id":"A467","pred":"pubann:denotes","subj":"467","obj":"MESH:D011134"},{"id":"A468","pred":"pubann:denotes","subj":"468","obj":"MESH:D011134"},{"id":"A469","pred":"pubann:denotes","subj":"469","obj":"MESH:D015658"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-sample-UniProt
{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T2323","span":{"begin":42,"end":45},"obj":"Protein"}],"attributes":[{"id":"A2323","pred":"uniprot_id","subj":"T2323","obj":"https://www.uniprot.org/uniprot/C1JJY3"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-sample-PD-GO-BP-0
{"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T36","span":{"begin":46,"end":59},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-sample-GO-BP
{"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T34","span":{"begin":46,"end":59},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-PD-GO-BP
{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T40","span":{"begin":46,"end":59},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T92","span":{"begin":0,"end":317},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"465","span":{"begin":96,"end":103},"obj":"Chemical"},{"id":"466","span":{"begin":158,"end":170},"obj":"Chemical"},{"id":"467","span":{"begin":176,"end":183},"obj":"Chemical"},{"id":"468","span":{"begin":297,"end":303},"obj":"Chemical"},{"id":"469","span":{"begin":36,"end":59},"obj":"Disease"}],"attributes":[{"id":"A465","pred":"tao:has_database_id","subj":"465","obj":"MESH:D011134"},{"id":"A467","pred":"tao:has_database_id","subj":"467","obj":"MESH:D011134"},{"id":"A468","pred":"tao:has_database_id","subj":"468","obj":"MESH:D011134"},{"id":"A469","pred":"tao:has_database_id","subj":"469","obj":"MESH:D015658"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"We have previously demonstrated for HIV-1 Env glycosylation that the processing of complex-type glycans is driven by the producer cell but that the levels of oligomannose-type glycans were largely independent of the expression system and are much more closely related to the protein structure and glycan density (36)."}