PMC:7199903 / 119-331
Annnotations
LitCovid-PD-FMA-UBERON
{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T2","span":{"begin":91,"end":98},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-PD-MONDO
{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T5","span":{"begin":46,"end":54},"obj":"Disease"},{"id":"T6","span":{"begin":114,"end":123},"obj":"Disease"}],"attributes":[{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-PD-CLO
{"project":"LitCovid-PD-CLO","denotations":[{"id":"T1","span":{"begin":58,"end":68},"obj":"http://purl.obolibrary.org/obo/CLO_0009985"},{"id":"T2","span":{"begin":161,"end":164},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T3","span":{"begin":165,"end":167},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-PD-CHEBI
{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T2","span":{"begin":91,"end":98},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sample-PD-IDO
{"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T2","span":{"begin":114,"end":123},"obj":"http://purl.obolibrary.org/obo/IDO_0000586"},{"id":"T3","span":{"begin":182,"end":187},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"},{"id":"T4","span":{"begin":199,"end":204},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sample-Enju
{"project":"LitCovid-sample-Enju","denotations":[{"id":"T16","span":{"begin":4,"end":9},"obj":"JJ"},{"id":"T17","span":{"begin":10,"end":21},"obj":"JJ"},{"id":"T18","span":{"begin":22,"end":30},"obj":"NN"},{"id":"T19","span":{"begin":31,"end":42},"obj":"NN"},{"id":"T20","span":{"begin":43,"end":44},"obj":"CD"},{"id":"T21","span":{"begin":45,"end":46},"obj":"-LRB-"},{"id":"T22","span":{"begin":46,"end":56},"obj":"NN"},{"id":"T23","span":{"begin":56,"end":57},"obj":"-RRB-"},{"id":"T24","span":{"begin":58,"end":60},"obj":"VBZ"},{"id":"T25","span":{"begin":61,"end":68},"obj":"VBN"},{"id":"T26","span":{"begin":69,"end":71},"obj":"IN"},{"id":"T27","span":{"begin":72,"end":75},"obj":"DT"},{"id":"T28","span":{"begin":76,"end":84},"obj":"JJ"},{"id":"T29","span":{"begin":85,"end":90},"obj":"NN"},{"id":"T30","span":{"begin":91,"end":98},"obj":"NN"},{"id":"T31","span":{"begin":99,"end":103},"obj":"WDT"},{"id":"T32","span":{"begin":104,"end":113},"obj":"VBZ"},{"id":"T33","span":{"begin":114,"end":123},"obj":"NN"},{"id":"T34","span":{"begin":125,"end":129},"obj":"DT"},{"id":"T35","span":{"begin":130,"end":138},"obj":"NN"},{"id":"T36","span":{"begin":139,"end":141},"obj":"IN"},{"id":"T37","span":{"begin":142,"end":145},"obj":"DT"},{"id":"T38","span":{"begin":146,"end":154},"obj":"JJ"},{"id":"T39","span":{"begin":155,"end":160},"obj":"NN"},{"id":"T40","span":{"begin":161,"end":164},"obj":"VBZ"},{"id":"T41","span":{"begin":165,"end":167},"obj":"CD"},{"id":"T42","span":{"begin":168,"end":181},"obj":"NN"},{"id":"T43","span":{"begin":182,"end":187},"obj":"NNS"},{"id":"T44","span":{"begin":189,"end":192},"obj":"WRB"},{"id":"T45","span":{"begin":193,"end":198},"obj":"DT"},{"id":"T46","span":{"begin":199,"end":204},"obj":"NNS"},{"id":"T47","span":{"begin":205,"end":208},"obj":"VBP"}],"relations":[{"id":"R22","pred":"arg2Of","subj":"T25","obj":"T24"},{"id":"R24","pred":"arg1Of","subj":"T25","obj":"T26"},{"id":"R25","pred":"arg2Of","subj":"T30","obj":"T26"},{"id":"R26","pred":"arg1Of","subj":"T30","obj":"T27"},{"id":"R27","pred":"arg1Of","subj":"T30","obj":"T28"},{"id":"R28","pred":"arg1Of","subj":"T30","obj":"T29"},{"id":"R29","pred":"arg1Of","subj":"T30","obj":"T31"},{"id":"R14","pred":"arg1Of","subj":"T19","obj":"T16"},{"id":"R15","pred":"arg1Of","subj":"T19","obj":"T17"},{"id":"R16","pred":"arg1Of","subj":"T19","obj":"T18"},{"id":"R17","pred":"arg1Of","subj":"T19","obj":"T20"},{"id":"R18","pred":"arg1Of","subj":"T19","obj":"T21"},{"id":"R19","pred":"arg2Of","subj":"T22","obj":"T21"},{"id":"R20","pred":"arg3Of","subj":"T23","obj":"T21"},{"id":"R30","pred":"arg1Of","subj":"T30","obj":"T32"},{"id":"R31","pred":"arg2Of","subj":"T33","obj":"T32"},{"id":"R32","pred":"arg1Of","subj":"T35","obj":"T34"},{"id":"R33","pred":"arg1Of","subj":"T35","obj":"T36"},{"id":"R34","pred":"arg2Of","subj":"T39","obj":"T36"},{"id":"R35","pred":"arg1Of","subj":"T39","obj":"T37"},{"id":"R36","pred":"arg1Of","subj":"T39","obj":"T38"},{"id":"R37","pred":"arg1Of","subj":"T35","obj":"T40"},{"id":"R38","pred":"arg2Of","subj":"T43","obj":"T40"},{"id":"R39","pred":"arg1Of","subj":"T43","obj":"T41"},{"id":"R40","pred":"arg1Of","subj":"T43","obj":"T42"},{"id":"R42","pred":"arg1Of","subj":"T46","obj":"T45"},{"id":"R43","pred":"arg1Of","subj":"T46","obj":"T47"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sample-PD-FMA
{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T2","span":{"begin":91,"end":98},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sample-CHEBI
{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T2","span":{"begin":91,"end":98},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sample-PD-NCBITaxon
{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T4","span":{"begin":46,"end":56},"obj":"Species"}],"attributes":[{"id":"A4","pred":"ncbi_taxonomy_id","subj":"T4","obj":"NCBItxid:2697049"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sample-sentences
{"project":"LitCovid-sample-sentences","denotations":[{"id":"T4","span":{"begin":125,"end":188},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sample-PD-MONDO
{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T4","span":{"begin":46,"end":56},"obj":"Disease"},{"id":"T5","span":{"begin":114,"end":123},"obj":"Disease"}],"attributes":[{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sample-Pubtator
{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"17","span":{"begin":85,"end":90},"obj":"Gene"},{"id":"20","span":{"begin":46,"end":56},"obj":"Species"},{"id":"21","span":{"begin":155,"end":160},"obj":"Gene"},{"id":"25","span":{"begin":114,"end":123},"obj":"Disease"}],"attributes":[{"id":"A17","pred":"pubann:denotes","subj":"17","obj":"Gene:43740568"},{"id":"A20","pred":"pubann:denotes","subj":"20","obj":"Tax:2697049"},{"id":"A21","pred":"pubann:denotes","subj":"21","obj":"Gene:43740568"},{"id":"A25","pred":"pubann:denotes","subj":"25","obj":"MESH:D007239"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sample-UniProt
{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T2","span":{"begin":85,"end":98},"obj":"Protein"}],"attributes":[{"id":"A2","pred":"uniprot_id","subj":"T2","obj":"https://www.uniprot.org/uniprot/P31340"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sample-PD-GO-BP-0
{"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T1","span":{"begin":168,"end":181},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sample-GO-BP
{"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T1","span":{"begin":168,"end":181},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-PD-GO-BP
{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":168,"end":181},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T4","span":{"begin":125,"end":188},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"17","span":{"begin":85,"end":90},"obj":"Gene"},{"id":"20","span":{"begin":46,"end":56},"obj":"Species"},{"id":"21","span":{"begin":155,"end":160},"obj":"Gene"},{"id":"25","span":{"begin":114,"end":123},"obj":"Disease"}],"attributes":[{"id":"A17","pred":"tao:has_database_id","subj":"17","obj":"Gene:43740568"},{"id":"A20","pred":"tao:has_database_id","subj":"20","obj":"Tax:2697049"},{"id":"A21","pred":"tao:has_database_id","subj":"21","obj":"Gene:43740568"},{"id":"A25","pred":"tao:has_database_id","subj":"25","obj":"MESH:D007239"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"ere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are gly"}