PMC:7190487 / 2875-3705
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T15 | 161-169 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
T16 | 275-280 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T17 | 400-407 | Body_part | denotes | insulin | http://purl.org/sig/ont/fma/fma83365 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T6 | 275-280 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T19 | 131-140 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
T20 | 227-236 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
T21 | 620-629 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
T22 | 707-716 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T23 | 819-827 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T40 | 73-83 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signalling |
T41 | 237-244 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
T42 | 256-265 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activates |
T43 | 275-280 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T44 | 275-280 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T45 | 362-372 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
T46 | 400-416 | http://purl.obolibrary.org/obo/PR_000009064 | denotes | insulin receptor |
T47 | 473-483 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signalling |
T48 | 493-495 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T49 | 603-609 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T42 | 5-14 | Chemical | denotes | Metformin | http://purl.obolibrary.org/obo/CHEBI_6801 |
T43 | 56-65 | Chemical | denotes | rapamycin | http://purl.obolibrary.org/obo/CHEBI_9168 |
T44 | 246-255 | Chemical | denotes | Metformin | http://purl.obolibrary.org/obo/CHEBI_6801 |
T45 | 400-407 | Chemical | denotes | insulin | http://purl.obolibrary.org/obo/CHEBI_145810 |
T46 | 504-513 | Chemical | denotes | biguanide | http://purl.obolibrary.org/obo/CHEBI_3095 |
T47 | 514-523 | Chemical | denotes | molecules | http://purl.obolibrary.org/obo/CHEBI_25367 |
T48 | 538-548 | Chemical | denotes | phenformin | http://purl.obolibrary.org/obo/CHEBI_8064 |
T49 | 729-738 | Chemical | denotes | metformin | http://purl.obolibrary.org/obo/CHEBI_6801 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T27 | 73-83 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
T28 | 115-127 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
T29 | 266-270 | http://purl.obolibrary.org/obo/GO_0050405 | denotes | AMPK |
T30 | 266-270 | http://purl.obolibrary.org/obo/GO_0047322 | denotes | AMPK |
T31 | 266-270 | http://purl.obolibrary.org/obo/GO_0004691 | denotes | AMPK |
T32 | 381-396 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
T33 | 473-491 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signalling cascade |
T34 | 473-483 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
T35 | 655-659 | http://purl.obolibrary.org/obo/GO_0016303 | denotes | PI3K |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T26 | 0-31 | Sentence | denotes | 2.2 Metformin-mTOR-Coronavirus |
T27 | 32-245 | Sentence | denotes | The mammalian target of rapamycin (mTOR) signalling plays an important role in the pathogenesis of influenza, besides modulating antibody response for cross-protective immunity against infective influenza viruses. |
T28 | 246-327 | Sentence | denotes | Metformin activates AMPK via liver kinase B1 (LKB1), inhibiting the mTOR pathway. |
T29 | 328-497 | Sentence | denotes | It also indirectly attenuates AKT activation through phosphorylation of insulin receptor substrate 1 (IRS-1) resulting in inhibition of the mTOR signalling cascade [11]. |
T30 | 498-641 | Sentence | denotes | Other biguanide molecules, buformin and phenformin have been associated with better survival outcomes in animal models of influenza [12], [13]. |
T31 | 642-722 | Sentence | denotes | Further, the PI3K/AKT/mTOR pathway plays major roles in MERS‑CoV infection [14]. |
T32 | 723-830 | Sentence | denotes | Since metformin inhibits the same pathway, it would be interesting to decipher its role against SARS-CoV-2. |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32360697-21421541-25244887 | 493-495 | 21421541 | denotes | 11 |
32360697-5447272-25244888 | 631-633 | 5447272 | denotes | 12 |
32360697-32313883-25244889 | 637-639 | 32313883 | denotes | 13 |
32360697-25487801-25244890 | 718-720 | 25487801 | denotes | 14 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
126 | 15-19 | Gene | denotes | mTOR | Gene:2475 |
127 | 5-14 | Chemical | denotes | Metformin | MESH:D008687 |
150 | 36-65 | Gene | denotes | mammalian target of rapamycin | Gene:2475 |
151 | 67-71 | Gene | denotes | mTOR | Gene:2475 |
152 | 266-270 | Gene | denotes | AMPK | Gene:5563 |
153 | 275-290 | Gene | denotes | liver kinase B1 | Gene:6794 |
154 | 292-296 | Gene | denotes | LKB1 | Gene:6794 |
155 | 314-318 | Gene | denotes | mTOR | Gene:2475 |
156 | 358-361 | Gene | denotes | AKT | Gene:207 |
157 | 400-428 | Gene | denotes | insulin receptor substrate 1 | Gene:3667 |
158 | 430-435 | Gene | denotes | IRS-1 | Gene:3667 |
159 | 468-472 | Gene | denotes | mTOR | Gene:2475 |
160 | 660-663 | Gene | denotes | AKT | Gene:207 |
161 | 664-668 | Gene | denotes | mTOR | Gene:2475 |
162 | 227-244 | Species | denotes | influenza viruses | Tax:11308 |
163 | 819-829 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
164 | 131-140 | Species | denotes | influenza | Tax:11308 |
165 | 620-629 | Species | denotes | influenza | Tax:11308 |
166 | 246-255 | Chemical | denotes | Metformin | MESH:D008687 |
167 | 504-513 | Chemical | denotes | biguanide | MESH:D001645 |
168 | 525-533 | Chemical | denotes | buformin | MESH:D002026 |
169 | 538-548 | Chemical | denotes | phenformin | MESH:D010629 |
170 | 729-738 | Chemical | denotes | metformin | MESH:D008687 |
171 | 698-716 | Disease | denotes | MERS‑CoV infection | MESH:D018352 |