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PMC:7170415 / 6249-8395 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
109 38-48 Species denotes SARS–CoV-2 Tax:2697049
115 171-178 Species denotes persons Tax:9606
116 416-423 Species denotes persons Tax:9606
117 532-542 Species denotes SARS–CoV-2 Tax:2697049
118 583-590 Species denotes persons Tax:9606
119 391-399 Disease denotes infected MESH:D007239
128 625-635 Species denotes SARS–CoV-2 Tax:2697049
129 1000-1007 Species denotes persons Tax:9606
130 1189-1196 Species denotes persons Tax:9606
131 1249-1257 Species denotes patients Tax:9606
132 1355-1363 Species denotes patients Tax:9606
133 1180-1188 Disease denotes infected MESH:D007239
134 1263-1272 Disease denotes pneumonia MESH:D011014
135 1387-1393 Disease denotes deaths MESH:D003643
137 1874-1882 Species denotes patients Tax:9606

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T7 1640-1644 Body_part denotes face http://purl.org/sig/ont/fma/fma24728

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 1640-1644 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T34 38-42 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T35 328-342 Disease denotes infectiousness http://purl.obolibrary.org/obo/MONDO_0005550
T36 532-536 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T37 625-629 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T38 1263-1272 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T39 1277-1286 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T40 1410-1420 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T45 23-30 http://purl.obolibrary.org/obo/UBERON_0000473 denotes Testing
T46 350-358 http://purl.obolibrary.org/obo/OBI_0100026 denotes organism
T47 350-358 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organism
T48 425-427 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T49 636-643 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T50 644-647 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T51 680-681 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T52 880-887 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T53 968-973 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T54 982-987 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T55 1085-1086 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T56 1399-1400 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 1479-1481 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T58 1575-1582 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T59 1628-1630 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T60 1640-1644 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T61 1696-1706 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing is
T62 1733-1740 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T63 1779-1786 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T64 1891-1892 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T8 308-322 http://purl.obolibrary.org/obo/GO_0019076 denotes viral shedding

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T47 0-57 Sentence denotes The Role of Diagnostic Testing in the SARS–CoV-2 Pandemic
T48 58-247 Sentence denotes The primary goal of epidemic containment is to reduce disease transmission by reducing the number of susceptible persons in the population or by reducing the basic reproductive number (R0).
T49 248-429 Sentence denotes This number is modulated by such factors as the duration of viral shedding, the infectiousness of the organism, and the contact matrix between infected and susceptible persons (18).
T50 430-610 Sentence denotes Given the lack of effective vaccines or treatments (19), the only currently available lever to reduce SARS–CoV-2 transmission is to identify and isolate persons who are contagious.
T51 611-679 Sentence denotes Deployment of SARS–CoV-2 testing has varied widely across the globe.
T52 680-801 Sentence denotes A few Asian countries have illustrated the power of preparedness, flexible isolation systems, and intensive case finding.
T53 802-900 Sentence denotes South Korea dramatically slowed the epidemic by implementing an unprecedented testing effort (20).
T54 901-1069 Sentence denotes Using innovative measures, South Korea performed more than 300 000 tests (5828.6 tests per million persons) in the 9 weeks after the first case was identified (20, 21).
T55 1070-1157 Sentence denotes Singapore used a broad case definition, aggressive contact tracing, and isolation (10).
T56 1158-1432 Sentence denotes Moreover, to identify infected persons not meeting the case definition, Singapore screened patients with pneumonia and influenza-like illnesses in hospitals and primary care settings, severely ill patients in intensive care, and deaths with a possible infectious cause (10).
T57 1433-1483 Sentence denotes Taiwan and Hong Kong used similar approaches (22).
T58 1484-1632 Sentence denotes These countries rapidly deployed resource-intensive strategies that prioritized aggressive testing and isolation to interrupt transmission (20, 22).
T59 1633-1815 Sentence denotes In the face of widespread transmission, the role of diagnostic testing is contingent on the type of testing available, the resources required for testing, and time to obtain results.
T60 1816-2039 Sentence denotes For example, rapidly identifying cases among hospitalized patients remains a high priority to properly allocate personal protective equipment and to prevent nosocomial spread with subsequent community transmission (23, 24).
T61 2040-2146 Sentence denotes Likewise, specific treatment decisions and enrollment in ongoing clinical trials require prompt diagnosis.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T2 1263-1272 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090