PMC:7166029 / 9385-10239
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 228 | 813-846 | Gene | denotes | Whole blood 0 1 / / / / Tear 0 10 | |
| 229 | 491-508 | Species | denotes | Influenza A Virus | Tax:11320 |
| 230 | 509-526 | Species | denotes | Influenza B Virus | Tax:11520 |
| 231 | 482-490 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 240 | 359-376 | Gene | denotes | influenza A and B | |
| 241 | 66-73 | Species | denotes | patient | Tax:9606 |
| 242 | 186-194 | Species | denotes | patients | Tax:9606 |
| 243 | 288-296 | Species | denotes | patients | Tax:9606 |
| 244 | 345-353 | Species | denotes | patients | Tax:9606 |
| 245 | 2-10 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 246 | 114-122 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 247 | 214-222 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T71 | 156-161 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T72 | 258-262 | Body_part | denotes | tear | http://purl.org/sig/ont/fma/fma59756 |
| T73 | 684-689 | Body_part | denotes | Feces | http://purl.org/sig/ont/fma/fma64183 |
| T74 | 708-713 | Body_part | denotes | Serum | http://purl.org/sig/ont/fma/fma63083 |
| T75 | 739-745 | Body_part | denotes | Sputum | http://purl.org/sig/ont/fma/fma312401 |
| T76 | 819-824 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T77 | 837-841 | Body_part | denotes | Tear | http://purl.org/sig/ont/fma/fma59756 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T35 | 156-161 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T36 | 684-689 | Body_part | denotes | Feces | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T37 | 708-713 | Body_part | denotes | Serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T38 | 739-745 | Body_part | denotes | Sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
| T39 | 819-824 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T68 | 2-10 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T69 | 114-122 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T70 | 214-222 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T71 | 359-368 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T72 | 482-490 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T73 | 491-500 | Disease | denotes | Influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T74 | 509-518 | Disease | denotes | Influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T103 | 0-1 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T104 | 369-370 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T105 | 375-376 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T106 | 452-456 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T107 | 501-502 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T108 | 503-508 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | Virus |
| T109 | 519-520 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T110 | 521-526 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | Virus |
| T111 | 549-553 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | Test |
| T112 | 582-586 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | Test |
| T113 | 615-619 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | Test |
| T114 | 819-824 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T115 | 819-824 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T80 | 11-23 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T81 | 19-23 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T82 | 123-135 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T83 | 131-135 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T84 | 223-236 | Chemical | denotes | nucleic acids | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T85 | 231-236 | Chemical | denotes | acids | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T86 | 439-451 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T87 | 447-451 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T86 | 0-84 | Sentence | denotes | A COVID-19 nucleic acid was detected in 32 swabs collected during patient screening. |
| T87 | 85-113 | Sentence | denotes | The detection rate was 1.3%. |
| T88 | 114-204 | Sentence | denotes | COVID-19 nucleic acid was detected in the stool specimens of 8 positive patients examined. |
| T89 | 205-297 | Sentence | denotes | However, COVID-19 nucleic acids were not detected in tear samples from 10 positive patients. |
| T90 | 298-421 | Sentence | denotes | During the same period, the detection rates of patients with influenza A and B were 2.3% and 3.3%, respectively (Table 2 ). |
| T91 | 422-467 | Sentence | denotes | Table 2 Types of nucleic acid test specimens. |
| T92 | 468-526 | Sentence | denotes | Specimen type COVID-19 Influenza A Virus Influenza B Virus |
| T93 | 527-625 | Sentence | denotes | Positive cases-No., % Test cases Positive cases-No., % Test cases Positive cases-No., % Test cases |
| T94 | 626-683 | Sentence | denotes | Pharyngeal swab 32 (1.3) 2510 57 (2.3) 2510 84 (3.3) 2510 |
| T95 | 684-707 | Sentence | denotes | Feces 8 (19) 43 0 6 0 6 |
| T96 | 708-738 | Sentence | denotes | Serum 0 31 2 (13) 15 2 (13) 15 |
| T97 | 739-760 | Sentence | denotes | Sputum 0 15 0 15 0 15 |
| T98 | 761-789 | Sentence | denotes | Bronchial lavage 0 1 0 1 0 1 |
| T99 | 790-812 | Sentence | denotes | Nasal swab 0 6 / / / / |
| T100 | 813-836 | Sentence | denotes | Whole blood 0 1 / / / / |
| T101 | 837-854 | Sentence | denotes | Tear 0 10 / / / / |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T192 | 2-10 | SP_7 | denotes | COVID-19 |
| T193 | 11-18 | GO:0005634 | denotes | nucleic |
| T194 | 114-122 | SP_7 | denotes | COVID-19 |
| T195 | 123-130 | GO:0005634 | denotes | nucleic |
| T196 | 156-161 | UBERON:0001988 | denotes | stool |
| T197 | 214-222 | SP_7 | denotes | COVID-19 |
| T198 | 223-230 | GO:0005634 | denotes | nucleic |
| T201 | 439-446 | GO:0005634 | denotes | nucleic |
| T20807 | 10-19 | SP_7 | denotes | nucleic |
| T61730 | 20-26 | GO:0005634 | denotes | cid wa |
| T93353 | 52-57 | UBERON:0001988 | denotes | lecte |
| T66017 | 110-118 | SP_7 | denotes | 3%. COVI |
| T51944 | 119-126 | GO:0005634 | denotes | -19 nuc |
| T199 | 334-340 | GO:0005634 | denotes | n rate |
| T200 | 659-666 | UBERON:0000178 | denotes | (2.3) 2 |
| T46475 | 699-705 | GO:0005634 | denotes | 0 6 0 |
| T98722 | 749-755 | GO:0005634 | denotes | 5 0 15 |
| T6805 | 781-789 | SP_7 | denotes | 0 1 0 1 |