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PMC:7160614 / 4222-5095 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
93 399-409 Species denotes SARS-CoV-2 Tax:2697049
94 629-637 Species denotes patients Tax:9606
95 37-45 Disease denotes COVID-19 MESH:C000657245
96 614-628 Disease denotes critically ill MESH:D016638
97 675-684 Disease denotes pneumonia MESH:D011014

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T33 37-45 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T34 399-407 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T35 675-684 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T25 72-73 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T26 87-91 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T27 317-320 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T28 361-363 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T29 387-394 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T30 419-420 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T31 745-746 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T32 868-872 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T2 74-86 Chemical denotes nucleic acid http://purl.obolibrary.org/obo/CHEBI_33696
T3 82-86 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T4 855-867 Chemical denotes nucleic acid http://purl.obolibrary.org/obo/CHEBI_33696
T5 863-867 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 105-126 http://purl.obolibrary.org/obo/GO_0001171 denotes reverse transcription
T2 113-126 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T12 675-684 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T38 0-197 Sentence denotes The current diagnostic criterion for COVID-19 is the positive result of a nucleic acid test by real-time reverse transcription polymerase chain reaction (RT-PCR) or next-generation sequencing [14].
T39 198-365 Sentence denotes However, false-negative results caused by unstable specimen processing are relatively high in clinical practice, which has worsened the spread of the outbreak [15–18].
T40 366-480 Sentence denotes Moreover, laboratory testing for SARS-CoV-2 requires a rigorous platform, which is not assembled in all hospitals.
T41 481-555 Sentence denotes Thus, this requires specimen transfer, which may delay diagnosis for days.
T42 556-699 Sentence denotes Early and accurate diagnosis is crucial, particularly for critically ill patients who need emergency surgery, and with pneumonia complications.
T43 700-873 Sentence denotes To solve these problems, we hypothesize that a diagnostic model can be developed based on CT imaging and clinical manifestations alone, independent of the nucleic acid test.