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PMC:7160614 / 20663-22286 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
300 847-852 Disease denotes Cough MESH:D003371
301 863-870 Disease denotes Fatigue MESH:D005221
302 1174-1179 Disease denotes Cough MESH:D003371
303 1190-1197 Disease denotes Fatigue MESH:D005221

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T48 771-776 Body_part denotes Heart http://purl.org/sig/ont/fma/fma7088
T49 814-830 Body_part denotes White blood cell http://purl.org/sig/ont/fma/fma62852
T50 826-830 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T51 879-889 Body_part denotes Lymphocyte http://purl.org/sig/ont/fma/fma62863
T52 1097-1102 Body_part denotes Heart http://purl.org/sig/ont/fma/fma7088
T53 1141-1157 Body_part denotes White blood cell http://purl.org/sig/ont/fma/fma62852
T54 1153-1157 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T55 1208-1218 Body_part denotes Lymphocyte http://purl.org/sig/ont/fma/fma62863

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T34 676-682 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055
T35 771-776 Body_part denotes Heart http://purl.obolibrary.org/obo/UBERON_0000948
T36 820-825 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T37 1036-1042 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055
T38 1097-1102 Body_part denotes Heart http://purl.obolibrary.org/obo/UBERON_0000948
T39 1147-1152 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T129 61-63 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T130 361-363 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T131 676-682 http://purl.obolibrary.org/obo/UBERON_0000055 denotes vessel
T132 771-776 http://purl.obolibrary.org/obo/UBERON_0000948 denotes Heart
T133 771-776 http://purl.obolibrary.org/obo/UBERON_0007100 denotes Heart
T134 771-776 http://purl.obolibrary.org/obo/UBERON_0015228 denotes Heart
T135 771-776 http://www.ebi.ac.uk/efo/EFO_0000815 denotes Heart
T136 820-825 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T137 826-830 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T138 1036-1042 http://purl.obolibrary.org/obo/UBERON_0000055 denotes vessel
T139 1097-1102 http://purl.obolibrary.org/obo/UBERON_0000948 denotes Heart
T140 1097-1102 http://purl.obolibrary.org/obo/UBERON_0007100 denotes Heart
T141 1097-1102 http://purl.obolibrary.org/obo/UBERON_0015228 denotes Heart
T142 1097-1102 http://www.ebi.ac.uk/efo/EFO_0000815 denotes Heart
T143 1147-1152 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T144 1153-1157 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T7 749-760 http://purl.obolibrary.org/obo/GO_0045333 denotes Respiration
T8 749-760 http://purl.obolibrary.org/obo/GO_0007585 denotes Respiration
T9 1075-1086 http://purl.obolibrary.org/obo/GO_0045333 denotes Respiration
T10 1075-1086 http://purl.obolibrary.org/obo/GO_0007585 denotes Respiration

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T28 639-657 Phenotype denotes Pleural thickening http://purl.obolibrary.org/obo/HP_0031944
T29 847-852 Phenotype denotes Cough http://purl.obolibrary.org/obo/HP_0012735
T30 863-870 Phenotype denotes Fatigue http://purl.obolibrary.org/obo/HP_0012378
T31 1174-1179 Phenotype denotes Cough http://purl.obolibrary.org/obo/HP_0012735
T32 1190-1197 Phenotype denotes Fatigue http://purl.obolibrary.org/obo/HP_0012378

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T218 0-43 Sentence denotes Clinical and radiological feature selection
T219 44-188 Sentence denotes Of the features, 18 radiological features and 17 clinical features were selected to form the predictors based on the result from Tables 1 and 2.
T220 189-258 Sentence denotes Table 3 lists the features selected by univariate analysis and LASSO.
T221 259-307 Sentence denotes Table 3 Selected features in C, R, and CR models
T222 308-350 Sentence denotes Model and individual features Coefficients
T223 351-365 Sentence denotes R, n = 8 (41)*
T224 366-385 Sentence denotes   Intercept − 0.307
T225 386-438 Sentence denotes   Total number of mixed GGO in peripheral area 0.359
T226 439-478 Sentence denotes   Total number of consolidation − 1.262
T227 479-544 Sentence denotes   Total number of solid nodules with ground-glass opacities 0.452
T228 545-585 Sentence denotes   Interlobular septal thickening − 5.559
T229 586-614 Sentence denotes   Crazy paving pattern 3.566
T230 615-636 Sentence denotes   Tree-in-bud − 2.548
T231 637-663 Sentence denotes   Pleural thickening 3.265
T232 664-712 Sentence denotes   Offending vessel augmentation in lesions 5.504
T233 713-727 Sentence denotes C, n = 7 (26)*
T234 728-746 Sentence denotes   Intercept 29.273
T235 747-768 Sentence denotes   Respiration − 0.359
T236 769-789 Sentence denotes   Heart rate − 0.054
T237 790-811 Sentence denotes   Temperature − 0.289
T238 812-844 Sentence denotes   White blood cell count − 0.175
T239 845-860 Sentence denotes   Cough − 1.866
T240 861-876 Sentence denotes   Fatigue 2.855
T241 877-912 Sentence denotes   Lymphocyte count category − 0.028
T242 913-929 Sentence denotes CR, n = 10 (67)*
T243 930-948 Sentence denotes   Intercept 45.117
T244 949-1001 Sentence denotes   Total number of mixed GGO in peripheral area 0.108
T245 1002-1023 Sentence denotes   Tree-in-bud − 1.853
T246 1024-1072 Sentence denotes   Offending vessel augmentation in lesions 6.000
T247 1073-1094 Sentence denotes   Respiration − 0.583
T248 1095-1116 Sentence denotes   Heart ratio − 0.084
T249 1117-1138 Sentence denotes   Temperature − 0.536
T250 1139-1171 Sentence denotes   White blood cell count − 0.471
T251 1172-1187 Sentence denotes   Cough − 0.997
T252 1188-1205 Sentence denotes   Fatigue − 0.228
T253 1206-1241 Sentence denotes   Lymphocyte count category − 2.177
T254 1242-1424 Sentence denotes C, R, and CR indicate the predicted model based on clinical features, radiological features, and the combination of clinical features and clinical radiological features, respectively
T255 1425-1510 Sentence denotes *n means corresponding selected features, and data in parentheses are total features.
T256 1511-1623 Sentence denotes Coefficients: the estimate value of each feature in multivariate logistic regression model by “glm” package in R