PMC:7156903 / 10193-11546
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T12 | 0-5 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
| T13 | 169-174 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T14 | 489-494 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T15 | 559-564 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T16 | 655-659 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T17 | 755-768 | Body_part | denotes | pleural fluid | http://purl.org/sig/ont/fma/fma12273 |
| T18 | 813-818 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T19 | 902-907 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T20 | 1056-1061 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T21 | 1214-1219 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T22 | 1271-1275 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T11 | 0-5 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T12 | 169-174 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T13 | 489-494 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T14 | 655-659 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T15 | 755-768 | Body_part | denotes | pleural fluid | http://purl.obolibrary.org/obo/UBERON_0001087 |
| T16 | 813-818 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T17 | 902-907 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T18 | 1056-1061 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T19 | 1214-1219 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T20 | 1271-1275 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T72 | 20-28 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T73 | 131-139 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T74 | 983-991 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T83 | 0-5 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
| T84 | 169-174 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T85 | 241-242 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T86 | 489-494 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T87 | 559-564 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T88 | 641-642 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T89 | 655-659 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T90 | 655-659 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T91 | 773-774 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T92 | 788-791 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T93 | 813-818 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T94 | 902-907 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T95 | 1056-1061 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T96 | 1214-1219 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T97 | 1271-1275 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T98 | 1271-1275 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T99 | 1349-1351 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T23 | 1276-1281 | Chemical | denotes | bases | http://purl.obolibrary.org/obo/CHEBI_22695 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 389-398 | http://purl.obolibrary.org/obo/GO_0006810 | denotes | transport |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T72 | 0-159 | Sentence | denotes | Chest radiograph of COVID-19 is not routinely recommended in clinical practice currently because they are insensitive to detecting COVID-19 in the early stage. |
| T73 | 160-438 | Sentence | denotes | However, chest radiography may have some utility, with the potential to serve as a screening tool on the frontlines in medical settings with limited resources or in cases where the patient’s physical condition does not allow for transport to the radiology department CT scanner. |
| T74 | 439-565 | Sentence | denotes | As the disease progresses beyond the early stage, chest radiography can detect multiple patchy opacities throughout the lungs. |
| T75 | 566-666 | Sentence | denotes | These opacities eventually become confluent and severe cases may appear as a “whited out lung” [15]. |
| T76 | 667-839 | Sentence | denotes | In more advanced cases, in addition to the ground glass opacity and consolidation, even pleural fluid (in a severe case) has been reported on the chest radiographs [2, 16]. |
| T77 | 840-961 | Sentence | denotes | Progressive opacities and consolidation have been observed on chest radiographs over the time course of the illness [17]. |
| T78 | 962-1125 | Sentence | denotes | In the first case of COVID-19 reported in the USA, there were no obvious abnormalities on the chest radiograph during the early stages after the onset of symptoms. |
| T79 | 1126-1232 | Sentence | denotes | However, on day 9 of the illness, an increased area left basilar opacity was visible on chest radiography. |
| T80 | 1233-1353 | Sentence | denotes | Then, stable streaky opacities in the lung bases were visible, and the opacities have steadily increased over time [18]. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T18 | 1035-1061 | Phenotype | denotes | abnormalities on the chest | http://purl.obolibrary.org/obo/HP_0000765 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32296940-32007143-29373573 | 832-833 | 32007143 | denotes | 2 |
0_colil
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32296940-32007143-67388 | 832-833 | 32007143 | denotes | 2 |
TEST0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32296940-165-170-67388 | 832-833 | ["32007143"] | denotes | 2 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32296940-32007143-29373573 | 832-833 | 32007143 | denotes | 2 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 276 | 341-348 | Species | denotes | patient | Tax:9606 |
| 277 | 20-28 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 278 | 131-139 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 279 | 983-991 | Disease | denotes | COVID-19 | MESH:C000657245 |