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PMC:7156291 / 8683-11037 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
181 1532-1535 Gene denotes AST Gene:26503
182 1633-1651 Gene denotes C-reactive protein Gene:1401
183 482-489 Species denotes Patient Tax:9606
184 714-721 Species denotes patient Tax:9606
185 495-498 Disease denotes NCP MESH:C000657245
186 705-713 Disease denotes infected MESH:D007239
187 769-785 Disease denotes symptoms   Fever MESH:D051271
188 798-803 Disease denotes Cough MESH:D003371
189 842-849 Disease denotes Fatigue MESH:D005221
190 884-903 Disease denotes shortness of breath MESH:D004417
191 916-928 Disease denotes Pharyngalgia MESH:D010608
192 967-975 Disease denotes Headache MESH:D006261
193 986-992 Disease denotes Nausea MESH:D009325
194 1000-1008 Disease denotes vomiting MESH:D014839
195 1017-1025 Disease denotes Diarrhea MESH:D003967
197 418-425 Species denotes Patient Tax:9606
199 1753-1761 Species denotes patients Tax:9606
201 1825-1828 Gene denotes AST Gene:26503
203 1856-1861 Chemical denotes aData
206 2156-2159 Gene denotes AST Gene:26503
207 2194-2212 Gene denotes C-reactive protein Gene:1401
216 356-374 Gene denotes C-reactive protein Gene:1401
217 62-70 Species denotes Patients Tax:9606
218 142-149 Species denotes patient Tax:9606
219 335-343 Species denotes patients Tax:9606
220 400-408 Species denotes patients Tax:9606
221 133-141 Disease denotes infected MESH:D007239
222 188-193 Disease denotes Fever MESH:D005334
223 206-211 Disease denotes cough MESH:D003371

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T11 266-276 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T12 287-291 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T13 367-374 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T14 862-867 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T15 941-947 Body_part denotes Muscle http://purl.org/sig/ont/fma/fma32558
T16 1110-1126 Body_part denotes White blood cell http://purl.org/sig/ont/fma/fma62852
T17 1122-1126 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T18 1175-1185 Body_part denotes Lymphocyte http://purl.org/sig/ont/fma/fma62863
T19 1242-1253 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T20 1304-1316 Body_part denotes neutrophilic http://purl.org/sig/ont/fma/fma62860
T21 1317-1328 Body_part denotes granulocyte http://purl.org/sig/ont/fma/fma62854
T22 1381-1390 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T23 1433-1443 Body_part denotes Hemoglobin http://purl.org/sig/ont/fma/fma62293
T24 1644-1651 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T25 1799-1806 Body_part denotes alanine http://purl.org/sig/ont/fma/fma82749
T26 2035-2051 Body_part denotes white blood cell http://purl.org/sig/ont/fma/fma62852
T27 2047-2051 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T28 2059-2069 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T29 2085-2096 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T30 2106-2118 Body_part denotes neutrophilic http://purl.org/sig/ont/fma/fma62860
T31 2119-2130 Body_part denotes granulocyte http://purl.org/sig/ont/fma/fma62854
T32 2140-2149 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T33 2178-2188 Body_part denotes hemoglobin http://purl.org/sig/ont/fma/fma62293
T34 2205-2212 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T17 862-867 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T18 1116-1121 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T19 2041-2046 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T35 1017-1025 Disease denotes Diarrhea http://purl.obolibrary.org/obo/MONDO_0001673

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T42 287-291 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T43 454-458 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T44 519-520 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T45 574-576 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T46 586-588 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T47 619-623 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T48 619-623 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T49 680-682 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T50 862-867 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T51 941-947 http://purl.obolibrary.org/obo/UBERON_0001630 denotes Muscle
T52 941-947 http://purl.obolibrary.org/obo/UBERON_0005090 denotes Muscle
T53 941-947 http://www.ebi.ac.uk/efo/EFO_0000801 denotes Muscle
T54 941-947 http://www.ebi.ac.uk/efo/EFO_0001949 denotes Muscle
T55 1073-1080 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T56 1116-1121 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T57 1122-1126 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T58 1163-1165 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T59 1381-1390 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T60 1662-1664 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T61 2041-2046 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T62 2047-2051 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T63 2140-2149 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T64 2307-2309 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T13 367-374 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T14 537-542 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T15 1433-1443 Chemical denotes Hemoglobin http://purl.obolibrary.org/obo/CHEBI_5656
T16 1532-1535 Chemical denotes AST http://purl.obolibrary.org/obo/CHEBI_76649
T17 1576-1584 Chemical denotes Creatine http://purl.obolibrary.org/obo/CHEBI_16919
T18 1644-1651 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T19 1799-1806 Chemical denotes alanine http://purl.obolibrary.org/obo/CHEBI_16449
T20 1825-1828 Chemical denotes AST http://purl.obolibrary.org/obo/CHEBI_76649
T21 1829-1838 Chemical denotes aspartate http://purl.obolibrary.org/obo/CHEBI_132943|http://purl.obolibrary.org/obo/CHEBI_29995|http://purl.obolibrary.org/obo/CHEBI_72314
T24 2156-2159 Chemical denotes AST http://purl.obolibrary.org/obo/CHEBI_76649
T25 2161-2169 Chemical denotes creatine http://purl.obolibrary.org/obo/CHEBI_16919|http://purl.obolibrary.org/obo/CHEBI_57947
T27 2178-2188 Chemical denotes hemoglobin http://purl.obolibrary.org/obo/CHEBI_35143
T28 2205-2212 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T25 188-193 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T26 206-211 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T27 780-785 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T28 798-803 Phenotype denotes Cough http://purl.obolibrary.org/obo/HP_0012735
T29 842-849 Phenotype denotes Fatigue http://purl.obolibrary.org/obo/HP_0012378
T30 884-903 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T31 916-928 Phenotype denotes Pharyngalgia http://purl.obolibrary.org/obo/HP_0033050
T32 967-975 Phenotype denotes Headache http://purl.obolibrary.org/obo/HP_0002315
T33 986-1008 Phenotype denotes Nausea and/or vomiting http://purl.obolibrary.org/obo/HP_0002017
T34 1017-1025 Phenotype denotes Diarrhea http://purl.obolibrary.org/obo/HP_0002014

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T79 0-61 Sentence denotes The demographics of the study cohort are detailed in Table 1.
T80 62-187 Sentence denotes Patients with exposure history (recent travel to Wuhan or contact with infected patient) accounted for 85.2% of study cohort.
T81 188-261 Sentence denotes Fever (84.1%) and cough (56.8%) were the most common presenting symptoms.
T82 262-409 Sentence denotes Low lymphocyte and white cell counts were observed in 26.4% and 25.0% of patients, while high C-reactive protein was observed in 55.0% of patients.
T83 410-466 Sentence denotes Table 1 Patient demographics and laboratory test results
T84 467-507 Sentence denotes Characteristic Patient with NCP (n = 88)
T85 508-532 Sentence denotes Age (years)a 42.7 ± 14.5
T86 533-550 Sentence denotes Age group (years)
T87 551-565 Sentence denotes   < 15 2 (2.3)
T88 566-583 Sentence denotes   15–44 48 (54.5)
T89 584-601 Sentence denotes   45–64 28 (31.8)
T90 602-618 Sentence denotes   ≥ 65 10 (11.4)
T91 619-637 Sentence denotes Male sex 51 (58.0)
T92 638-654 Sentence denotes Exposure history
T93 655-689 Sentence denotes   Recent travel to Wuhan 45 (51.1)
T94 690-731 Sentence denotes   Contact with infected patient 30 (34.1)
T95 732-760 Sentence denotes   Unknown exposure 13 (14.8)
T96 761-777 Sentence denotes Initial symptoms
T97 778-795 Sentence denotes   Fever 74 (84.1)
T98 796-813 Sentence denotes   Cough 50 (56.8)
T99 814-839 Sentence denotes   Expectoration 19 (21.6)
T100 840-859 Sentence denotes   Fatigue 15 (17.0)
T101 860-913 Sentence denotes   Chest distress and/or shortness of breath 12 (13.6)
T102 914-938 Sentence denotes   Pharyngalgia 10 (11.4)
T103 939-964 Sentence denotes   Muscle soreness 7 (8.0)
T104 965-983 Sentence denotes   Headache 5 (5.7)
T105 984-1014 Sentence denotes   Nausea and/or vomiting 0 (0)
T106 1015-1031 Sentence denotes   Diarrhea 0 (0)
T107 1032-1061 Sentence denotes   No obvious symptoms 3 (3.4)
T108 1062-1107 Sentence denotes Laboratory testing at initial hospital visitb
T109 1108-1172 Sentence denotes   White blood cell count (–, ↑, ↓) 62 (70.5), 4 (4.5), 22 (25.0)
T110 1173-1231 Sentence denotes   Lymphocyte count (–, ↑, ↓) 62 (71.3), 2 (2.3), 23 (26.4)
T111 1232-1293 Sentence denotes   Percent lymphocytes (–, ↑, ↓) 55 (62.5), 7 (8.0), 26 (29.5)
T112 1294-1370 Sentence denotes   Percent neutrophilic granulocyte (–, ↑, ↓) 59 (67.1), 17 (19.3), 12 (13.6)
T113 1371-1430 Sentence denotes   Percent monocytes (–, ↑, ↓) 59 (67.1), 26 (29.5), 3 (3.4)
T114 1431-1483 Sentence denotes   Hemoglobin (–, ↑, ↓) 68 (77.3), 8 (9.1), 12 (13.6)
T115 1484-1529 Sentence denotes   ALT (–, ↑, ↓) 70 (79.5), 16 (18.2), 2 (2.3)
T116 1530-1573 Sentence denotes   AST (–, ↑, ↓) 73 (83.0), 15 (17.0), 0 (0)
T117 1574-1630 Sentence denotes   Creatine kinase (–, ↑, ↓) 73 (84.9), 4 (4.6), 9 (10.5)
T118 1631-1689 Sentence denotes   C-reactive protein (–, ↑, ↓) 36 (45.0), 44 (55.0), 0 (0)
T119 1690-1794 Sentence denotes Unless otherwise indicated, data are reported as the number of patients, with percentages in parentheses
T120 1795-1855 Sentence denotes ALT alanine aminotransferase, AST aspartate aminotransferase
T121 1856-1908 Sentence denotes aData are reported as the mean ± standard derivation
T122 1909-2017 Sentence denotes bThe signs –, ↑, and ↓ represent within, above, and below normal ranges of laboratory results, respectively.
T123 2018-2354 Sentence denotes Normal ranges of white blood cell count, lymphocyte count, percent lymphocytes, percent neutrophilic granulocyte, percent monocytes, ALT, AST, creatine kinase, hemoglobin, and C-reactive protein were 3.5–9.5 × 109/L, 1.10–3.20 × 109/L, 20–50%, 3.0–10.0%, 40–75%, 115–150 g/L, 7–40 U/L, 13–35 U/L, 40–200 U/L, and 0–10 mg/L, respectively