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LitCovid-PubTator

{"project":"LitCovid-PubTator","denotations":[{"id":"1534","span":{"begin":1779,"end":1793},"obj":"Species"},{"id":"1535","span":{"begin":1119,"end":1127},"obj":"Chemical"},{"id":"1536","span":{"begin":1174,"end":1194},"obj":"Chemical"},{"id":"1537","span":{"begin":1196,"end":1200},"obj":"Chemical"},{"id":"1538","span":{"begin":1206,"end":1229},"obj":"Chemical"},{"id":"1539","span":{"begin":1231,"end":1235},"obj":"Chemical"}],"attributes":[{"id":"A1534","pred":"tao:has_database_id","subj":"1534","obj":"Tax:90371"},{"id":"A1535","pred":"tao:has_database_id","subj":"1535","obj":"MESH:D011108"},{"id":"A1536","pred":"tao:has_database_id","subj":"1536","obj":"MESH:C013830"},{"id":"A1537","pred":"tao:has_database_id","subj":"1537","obj":"MESH:C013830"},{"id":"A1538","pred":"tao:has_database_id","subj":"1538","obj":"MESH:D019904"},{"id":"A1539","pred":"tao:has_database_id","subj":"1539","obj":"MESH:D019904"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Flow formats involve the detection of target species in the presence of flow fields. Flow formats include continuously-stirred systems (e.g., continuously-stirred tank bioreactors), flow cells, and microfluidics. Flow formats have the advantage of exposing the biosensor to target-containing samples in a controlled and repeatable fashion and the benefit of driving exposure of the functionalized biosensor to target species via convective mass transfer mechanisms. Flow formatsare also typically compatible with large sample volumes (liters). Flow cells are typically fabricated via milling and extrusion processes using materials such as Teflon or Plexiglas. They have the advantage of accommodating a variety of biosensor form factors, such as rigid three-dimensional biosensors. In addition to flow cells, flow formats are commonly achieved using microfluidic devices. While microfluidic devices are typically used with biosensors that exhibit thin two-dimensional form factors, such as planar electrodes, they offer various measurement advantages. Unlike flow cells, which are typically fabricated from machinable polymers, microfluidics are typically fabricated using polydimethylsiloxane (PDMS) and polymethyl methacrylate (PMMA) given their low cost and compatibility with microfabrication approaches. One advantage of microfluidic devices is their ability to perform integrated sample preparation steps, which eliminates the need for additional steps in the sample-to-result process (Sin et al. 2014). For example, microfluidic formats for pathogen detection using electrochemical biosensors have demonstrated fluid pumping, valving, and mixing of small sample volumes (Rivet et al. 2011). An example of a microfluidic format created by Dastider et al. for detection of S. typhimurium is shown in Fig. 4a (Dastider et al. 2015)."}

LitCovid-PD-FMA-UBERON

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T180","span":{"begin":187,"end":192},"obj":"Body_part"},{"id":"T181","span":{"begin":549,"end":554},"obj":"Body_part"},{"id":"T182","span":{"begin":803,"end":808},"obj":"Body_part"},{"id":"T183","span":{"begin":1065,"end":1070},"obj":"Body_part"}],"attributes":[{"id":"A180","pred":"fma_id","subj":"T180","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A181","pred":"fma_id","subj":"T181","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A182","pred":"fma_id","subj":"T182","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A183","pred":"fma_id","subj":"T183","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"Flow formats involve the detection of target species in the presence of flow fields. Flow formats include continuously-stirred systems (e.g., continuously-stirred tank bioreactors), flow cells, and microfluidics. Flow formats have the advantage of exposing the biosensor to target-containing samples in a controlled and repeatable fashion and the benefit of driving exposure of the functionalized biosensor to target species via convective mass transfer mechanisms. Flow formatsare also typically compatible with large sample volumes (liters). Flow cells are typically fabricated via milling and extrusion processes using materials such as Teflon or Plexiglas. They have the advantage of accommodating a variety of biosensor form factors, such as rigid three-dimensional biosensors. In addition to flow cells, flow formats are commonly achieved using microfluidic devices. While microfluidic devices are typically used with biosensors that exhibit thin two-dimensional form factors, such as planar electrodes, they offer various measurement advantages. Unlike flow cells, which are typically fabricated from machinable polymers, microfluidics are typically fabricated using polydimethylsiloxane (PDMS) and polymethyl methacrylate (PMMA) given their low cost and compatibility with microfabrication approaches. One advantage of microfluidic devices is their ability to perform integrated sample preparation steps, which eliminates the need for additional steps in the sample-to-result process (Sin et al. 2014). For example, microfluidic formats for pathogen detection using electrochemical biosensors have demonstrated fluid pumping, valving, and mixing of small sample volumes (Rivet et al. 2011). An example of a microfluidic format created by Dastider et al. for detection of S. typhimurium is shown in Fig. 4a (Dastider et al. 2015)."}

LitCovid-PD-CLO

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T568","span":{"begin":77,"end":83},"obj":"http://purl.obolibrary.org/obo/UBERON_0007688"},{"id":"T569","span":{"begin":187,"end":192},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T570","span":{"begin":303,"end":304},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T571","span":{"begin":549,"end":554},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T572","span":{"begin":702,"end":703},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T573","span":{"begin":803,"end":808},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T574","span":{"begin":864,"end":871},"obj":"http://purl.obolibrary.org/obo/OBI_0000968"},{"id":"T575","span":{"begin":892,"end":899},"obj":"http://purl.obolibrary.org/obo/OBI_0000968"},{"id":"T576","span":{"begin":1065,"end":1070},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T577","span":{"begin":1340,"end":1347},"obj":"http://purl.obolibrary.org/obo/OBI_0000968"},{"id":"T578","span":{"begin":1634,"end":1641},"obj":"http://www.ebi.ac.uk/efo/EFO_0000825"},{"id":"T579","span":{"begin":1713,"end":1714},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"Flow formats involve the detection of target species in the presence of flow fields. Flow formats include continuously-stirred systems (e.g., continuously-stirred tank bioreactors), flow cells, and microfluidics. Flow formats have the advantage of exposing the biosensor to target-containing samples in a controlled and repeatable fashion and the benefit of driving exposure of the functionalized biosensor to target species via convective mass transfer mechanisms. Flow formatsare also typically compatible with large sample volumes (liters). Flow cells are typically fabricated via milling and extrusion processes using materials such as Teflon or Plexiglas. They have the advantage of accommodating a variety of biosensor form factors, such as rigid three-dimensional biosensors. In addition to flow cells, flow formats are commonly achieved using microfluidic devices. While microfluidic devices are typically used with biosensors that exhibit thin two-dimensional form factors, such as planar electrodes, they offer various measurement advantages. Unlike flow cells, which are typically fabricated from machinable polymers, microfluidics are typically fabricated using polydimethylsiloxane (PDMS) and polymethyl methacrylate (PMMA) given their low cost and compatibility with microfabrication approaches. One advantage of microfluidic devices is their ability to perform integrated sample preparation steps, which eliminates the need for additional steps in the sample-to-result process (Sin et al. 2014). For example, microfluidic formats for pathogen detection using electrochemical biosensors have demonstrated fluid pumping, valving, and mixing of small sample volumes (Rivet et al. 2011). An example of a microfluidic format created by Dastider et al. for detection of S. typhimurium is shown in Fig. 4a (Dastider et al. 2015)."}

LitCovid-PD-CHEBI

LitCovid-sentences

{"project":"LitCovid-sentences","denotations":[{"id":"T695","span":{"begin":0,"end":84},"obj":"Sentence"},{"id":"T696","span":{"begin":85,"end":212},"obj":"Sentence"},{"id":"T697","span":{"begin":213,"end":465},"obj":"Sentence"},{"id":"T698","span":{"begin":466,"end":543},"obj":"Sentence"},{"id":"T699","span":{"begin":544,"end":660},"obj":"Sentence"},{"id":"T700","span":{"begin":661,"end":782},"obj":"Sentence"},{"id":"T701","span":{"begin":783,"end":872},"obj":"Sentence"},{"id":"T702","span":{"begin":873,"end":1052},"obj":"Sentence"},{"id":"T703","span":{"begin":1053,"end":1309},"obj":"Sentence"},{"id":"T704","span":{"begin":1310,"end":1503},"obj":"Sentence"},{"id":"T705","span":{"begin":1504,"end":1510},"obj":"Sentence"},{"id":"T706","span":{"begin":1511,"end":1691},"obj":"Sentence"},{"id":"T707","span":{"begin":1692,"end":1698},"obj":"Sentence"},{"id":"T708","span":{"begin":1699,"end":1830},"obj":"Sentence"},{"id":"T709","span":{"begin":1831,"end":1837},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Flow formats involve the detection of target species in the presence of flow fields. Flow formats include continuously-stirred systems (e.g., continuously-stirred tank bioreactors), flow cells, and microfluidics. Flow formats have the advantage of exposing the biosensor to target-containing samples in a controlled and repeatable fashion and the benefit of driving exposure of the functionalized biosensor to target species via convective mass transfer mechanisms. Flow formatsare also typically compatible with large sample volumes (liters). Flow cells are typically fabricated via milling and extrusion processes using materials such as Teflon or Plexiglas. They have the advantage of accommodating a variety of biosensor form factors, such as rigid three-dimensional biosensors. In addition to flow cells, flow formats are commonly achieved using microfluidic devices. While microfluidic devices are typically used with biosensors that exhibit thin two-dimensional form factors, such as planar electrodes, they offer various measurement advantages. Unlike flow cells, which are typically fabricated from machinable polymers, microfluidics are typically fabricated using polydimethylsiloxane (PDMS) and polymethyl methacrylate (PMMA) given their low cost and compatibility with microfabrication approaches. One advantage of microfluidic devices is their ability to perform integrated sample preparation steps, which eliminates the need for additional steps in the sample-to-result process (Sin et al. 2014). For example, microfluidic formats for pathogen detection using electrochemical biosensors have demonstrated fluid pumping, valving, and mixing of small sample volumes (Rivet et al. 2011). An example of a microfluidic format created by Dastider et al. for detection of S. typhimurium is shown in Fig. 4a (Dastider et al. 2015)."}

2_test

{"project":"2_test","denotations":[{"id":"32364936-24524681-7713113","span":{"begin":1504,"end":1508},"obj":"24524681"}],"text":"Flow formats involve the detection of target species in the presence of flow fields. Flow formats include continuously-stirred systems (e.g., continuously-stirred tank bioreactors), flow cells, and microfluidics. Flow formats have the advantage of exposing the biosensor to target-containing samples in a controlled and repeatable fashion and the benefit of driving exposure of the functionalized biosensor to target species via convective mass transfer mechanisms. Flow formatsare also typically compatible with large sample volumes (liters). Flow cells are typically fabricated via milling and extrusion processes using materials such as Teflon or Plexiglas. They have the advantage of accommodating a variety of biosensor form factors, such as rigid three-dimensional biosensors. In addition to flow cells, flow formats are commonly achieved using microfluidic devices. While microfluidic devices are typically used with biosensors that exhibit thin two-dimensional form factors, such as planar electrodes, they offer various measurement advantages. Unlike flow cells, which are typically fabricated from machinable polymers, microfluidics are typically fabricated using polydimethylsiloxane (PDMS) and polymethyl methacrylate (PMMA) given their low cost and compatibility with microfabrication approaches. One advantage of microfluidic devices is their ability to perform integrated sample preparation steps, which eliminates the need for additional steps in the sample-to-result process (Sin et al. 2014). For example, microfluidic formats for pathogen detection using electrochemical biosensors have demonstrated fluid pumping, valving, and mixing of small sample volumes (Rivet et al. 2011). An example of a microfluidic format created by Dastider et al. for detection of S. typhimurium is shown in Fig. 4a (Dastider et al. 2015)."}