PMC:7152911 / 85276-87113
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1534 | 1779-1793 | Species | denotes | S. typhimurium | Tax:90371 |
| 1535 | 1119-1127 | Chemical | denotes | polymers | MESH:D011108 |
| 1536 | 1174-1194 | Chemical | denotes | polydimethylsiloxane | MESH:C013830 |
| 1537 | 1196-1200 | Chemical | denotes | PDMS | MESH:C013830 |
| 1538 | 1206-1229 | Chemical | denotes | polymethyl methacrylate | MESH:D019904 |
| 1539 | 1231-1235 | Chemical | denotes | PMMA | MESH:D019904 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T180 | 187-192 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T181 | 549-554 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T182 | 803-808 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T183 | 1065-1070 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T568 | 77-83 | http://purl.obolibrary.org/obo/UBERON_0007688 | denotes | fields |
| T569 | 187-192 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T570 | 303-304 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T571 | 549-554 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T572 | 702-703 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T573 | 803-808 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T574 | 864-871 | http://purl.obolibrary.org/obo/OBI_0000968 | denotes | devices |
| T575 | 892-899 | http://purl.obolibrary.org/obo/OBI_0000968 | denotes | devices |
| T576 | 1065-1070 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T577 | 1340-1347 | http://purl.obolibrary.org/obo/OBI_0000968 | denotes | devices |
| T578 | 1634-1641 | http://www.ebi.ac.uk/efo/EFO_0000825 | denotes | valving |
| T579 | 1713-1714 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T49798 | 640-646 | Chemical | denotes | Teflon | http://purl.obolibrary.org/obo/CHEBI_53251 |
| T135 | 650-659 | Chemical | denotes | Plexiglas | http://purl.obolibrary.org/obo/CHEBI_53205|http://purl.obolibrary.org/obo/CHEBI_61369 |
| T88077 | 1119-1127 | Chemical | denotes | polymers | http://purl.obolibrary.org/obo/CHEBI_33839 |
| T138 | 1174-1194 | Chemical | denotes | polydimethylsiloxane | http://purl.obolibrary.org/obo/CHEBI_31498|http://purl.obolibrary.org/obo/CHEBI_48137|http://purl.obolibrary.org/obo/CHEBI_61466|http://purl.obolibrary.org/obo/CHEBI_61468 |
| T4858 | 1196-1200 | Chemical | denotes | PDMS | http://purl.obolibrary.org/obo/CHEBI_31498|http://purl.obolibrary.org/obo/CHEBI_61468 |
| T18099 | 1206-1229 | Chemical | denotes | polymethyl methacrylate | http://purl.obolibrary.org/obo/CHEBI_53205|http://purl.obolibrary.org/obo/CHEBI_61369 |
| T67637 | 1217-1229 | Chemical | denotes | methacrylate | http://purl.obolibrary.org/obo/CHEBI_25218 |
| T7670 | 1231-1235 | Chemical | denotes | PMMA | http://purl.obolibrary.org/obo/CHEBI_53205|http://purl.obolibrary.org/obo/CHEBI_60759|http://purl.obolibrary.org/obo/CHEBI_61369 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T695 | 0-84 | Sentence | denotes | Flow formats involve the detection of target species in the presence of flow fields. |
| T696 | 85-212 | Sentence | denotes | Flow formats include continuously-stirred systems (e.g., continuously-stirred tank bioreactors), flow cells, and microfluidics. |
| T697 | 213-465 | Sentence | denotes | Flow formats have the advantage of exposing the biosensor to target-containing samples in a controlled and repeatable fashion and the benefit of driving exposure of the functionalized biosensor to target species via convective mass transfer mechanisms. |
| T698 | 466-543 | Sentence | denotes | Flow formatsare also typically compatible with large sample volumes (liters). |
| T699 | 544-660 | Sentence | denotes | Flow cells are typically fabricated via milling and extrusion processes using materials such as Teflon or Plexiglas. |
| T700 | 661-782 | Sentence | denotes | They have the advantage of accommodating a variety of biosensor form factors, such as rigid three-dimensional biosensors. |
| T701 | 783-872 | Sentence | denotes | In addition to flow cells, flow formats are commonly achieved using microfluidic devices. |
| T702 | 873-1052 | Sentence | denotes | While microfluidic devices are typically used with biosensors that exhibit thin two-dimensional form factors, such as planar electrodes, they offer various measurement advantages. |
| T703 | 1053-1309 | Sentence | denotes | Unlike flow cells, which are typically fabricated from machinable polymers, microfluidics are typically fabricated using polydimethylsiloxane (PDMS) and polymethyl methacrylate (PMMA) given their low cost and compatibility with microfabrication approaches. |
| T704 | 1310-1503 | Sentence | denotes | One advantage of microfluidic devices is their ability to perform integrated sample preparation steps, which eliminates the need for additional steps in the sample-to-result process (Sin et al. |
| T705 | 1504-1510 | Sentence | denotes | 2014). |
| T706 | 1511-1691 | Sentence | denotes | For example, microfluidic formats for pathogen detection using electrochemical biosensors have demonstrated fluid pumping, valving, and mixing of small sample volumes (Rivet et al. |
| T707 | 1692-1698 | Sentence | denotes | 2011). |
| T708 | 1699-1830 | Sentence | denotes | An example of a microfluidic format created by Dastider et al. for detection of S. typhimurium is shown in Fig. 4a (Dastider et al. |
| T709 | 1831-1837 | Sentence | denotes | 2015). |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32364936-24524681-7713113 | 1504-1508 | 24524681 | denotes | 2014 |