PMC:7152911 / 77151-78595
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1478 | 732-751 | Chemical | denotes | lipopolysaccharides | MESH:D008070 |
| 1479 | 755-769 | Chemical | denotes | teichoic acids | MESH:D013682 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T164 | 732-751 | Body_part | denotes | lipopolysaccharides | http://purl.org/sig/ont/fma/fma82785 |
| T165 | 777-790 | Body_part | denotes | cell membrane | http://purl.org/sig/ont/fma/fma63841 |
| T166 | 777-781 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T167 | 906-910 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T168 | 1401-1406 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T16 | 1401-1406 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T508 | 150-159 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | Membranes |
| T509 | 498-499 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T510 | 630-638 | http://purl.obolibrary.org/obo/NCBITaxon_2 | denotes | Bacteria |
| T511 | 657-658 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T512 | 777-781 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T513 | 782-790 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
| T514 | 806-814 | http://purl.obolibrary.org/obo/NCBITaxon_2 | denotes | bacteria |
| T515 | 833-841 | http://purl.obolibrary.org/obo/NCBITaxon_2 | denotes | bacteria |
| T516 | 906-910 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T517 | 1401-1406 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T518 | 1401-1406 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T118 | 506-511 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
| T49236 | 732-751 | Chemical | denotes | lipopolysaccharides | http://purl.obolibrary.org/obo/CHEBI_16412 |
| T48646 | 755-769 | Chemical | denotes | teichoic acids | http://purl.obolibrary.org/obo/CHEBI_30049 |
| T63903 | 764-769 | Chemical | denotes | acids | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T55219 | 1342-1348 | Chemical | denotes | silica | http://purl.obolibrary.org/obo/CHEBI_30563 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T629 | 0-24 | Sentence | denotes | 3.1.1 Sample filtration |
| T630 | 25-149 | Sentence | denotes | Generally, sample filtration relies on the principle of size discrepancy between the target pathogen and background species. |
| T631 | 150-271 | Sentence | denotes | Membranes, fibers, and channels have been used in size-selective sample filtration processes for biosensing applications. |
| T632 | 272-435 | Sentence | denotes | Biorecognition elements are commonly used to assist the separation process when the target species exhibits similar properties to background species or the matrix. |
| T633 | 436-622 | Sentence | denotes | For example, biorecognition elements that exhibit affinity to a broad group of pathogens, such as lectins, have been used in pre-concentration steps for pathogen detection (Zourob et al. |
| T634 | 623-629 | Sentence | denotes | 2008). |
| T635 | 630-872 | Sentence | denotes | Bacteria typically exhibit a net negative charge at physiological pH (7.4) because of an abundance of lipopolysaccharides or teichoic acids on the cell membrane (Gram-negative bacteria and Gram-positive bacteria, respectively) (Silhavy et al. |
| T636 | 873-879 | Sentence | denotes | 2010). |
| T637 | 880-1027 | Sentence | denotes | This physical property of cell-based pathogens is leveraged in biofiltration processes, for example, using electropositive filters (Altintas et al. |
| T638 | 1028-1034 | Sentence | denotes | 2015). |
| T639 | 1035-1238 | Sentence | denotes | While the majority of the aforementioned separation processes involve manual handling steps, sample filtration processes are now being integrated with microfluidic-based biosensing platforms (Song et al. |
| T640 | 1239-1245 | Sentence | denotes | 2013). |
| T641 | 1246-1444 | Sentence | denotes | For example, Chand and Neethirajan incorporated an integrated sample filtration technique using silica microbeads for the detection of norovirus in spiked blood samples (Chand and Neethirajan 2017). |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32364936-26005094-7713102 | 1028-1032 | 26005094 | denotes | 2015 |
| 32364936-28649024-7713103 | 1438-1442 | 28649024 | denotes | 2017 |