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PMC:7152911 / 75288-76719 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T162 780-783 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T163 1233-1239 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T15 1233-1239 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T503 15-16 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T504 26-32 http://purl.obolibrary.org/obo/OBI_0000968 denotes device
T505 938-939 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T506 940-945 http://purl.obolibrary.org/obo/CLO_0007225 denotes label
T507 1029-1037 http://purl.obolibrary.org/obo/CLO_0007225 denotes labeling

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T29332 743-754 Chemical denotes application http://purl.obolibrary.org/obo/CHEBI_33232
T38008 780-783 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T62170 940-945 Chemical denotes label http://purl.obolibrary.org/obo/CHEBI_35209

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T31 59-71 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T616 0-322 Sentence denotes In addition to a physical device composed of an integrated transduction element and biorecognition element, an electrochemical biosensor-based assay for pathogen detection potentially involves processing steps associated with sample preparation and complementary physical systems for biosensor housing and sample handling.
T617 323-439 Sentence denotes The associated protocols for sample preparation and sample handling are often referred to as the measurement format.
T618 440-755 Sentence denotes Several important considerations regarding the measurement format for pathogen detection applications can be considered and vary based on the assay design, the biosensor performance (e.g., sensitivity and LOD), the volume, material properties, and composition of the pathogen-containing sample, and the application.
T619 756-915 Sentence denotes For example, the use of DNA-based assays for pathogen detection typically requires sample preparation steps associated with the extraction of genetic material.
T620 916-1038 Sentence denotes Similarly, the use of a label-based biosensing approach requires sample preparation steps associated with target labeling.
T621 1039-1174 Sentence denotes In cases where the concentration of target species in the sample is below the biosensor's LOD, pre-concentration steps may be required.
T622 1175-1304 Sentence denotes Applications to process monitoring, such in bioreactor or tissue-chip monitoring, may require flow-based sample handling formats.
T623 1305-1431 Sentence denotes We next discuss the measurement formats associated with pathogen detection in terms of sample preparation and sample handling.