PMC:7152911 / 133733-135331 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2015 1012-1019 Species denotes E. coli Tax:562
2016 651-658 Chemical denotes glycine MESH:D005998
2017 664-668 Chemical denotes urea MESH:D014508
2018 898-905 Chemical denotes acetone MESH:D000096
2019 954-956 Chemical denotes Au MESH:D006046
2020 1115-1132 Chemical denotes hydrogen peroxide MESH:D006861
2021 1072-1079 Disease denotes Johnson MESH:C535882

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T50 651-658 Body_part denotes glycine http://purl.org/sig/ont/fma/fma82753
T51 714-720 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T52 911-917 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T219 93-94 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T220 226-227 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T221 305-308 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T222 714-720 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T223 872-873 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T224 889-896 http://purl.obolibrary.org/obo/OBI_0100026 denotes organic
T225 889-896 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organic
T226 911-917 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T227 1027-1034 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T228 1100-1101 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T229 1507-1508 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T97738 606-610 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T30089 611-615 Chemical denotes base http://purl.obolibrary.org/obo/CHEBI_22695
T2572 651-658 Chemical denotes glycine http://purl.obolibrary.org/obo/CHEBI_15428|http://purl.obolibrary.org/obo/CHEBI_29947|http://purl.obolibrary.org/obo/CHEBI_57305
T93186 664-668 Chemical denotes urea http://purl.obolibrary.org/obo/CHEBI_16199
T90680 898-905 Chemical denotes acetone http://purl.obolibrary.org/obo/CHEBI_15347
T48726 954-956 Chemical denotes Au http://purl.obolibrary.org/obo/CHEBI_29287
T27352 1115-1132 Chemical denotes hydrogen peroxide http://purl.obolibrary.org/obo/CHEBI_16240
T67965 1115-1123 Chemical denotes hydrogen http://purl.obolibrary.org/obo/CHEBI_49637
T44570 1124-1132 Chemical denotes peroxide http://purl.obolibrary.org/obo/CHEBI_44785

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T14 244-256 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration
T15 387-399 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration
T16 625-637 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration
T17 700-712 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration
T18 1172-1184 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration
T19 1385-1397 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1082 0-50 Sentence denotes 5.5 Saturation-free continuous monitoring formats
T1083 51-174 Sentence denotes The inability to regenerate biosensors is a major hindrance to biosensor-based process monitoring and control applications.
T1084 175-376 Sentence denotes While various biosensors must be disposed of after a single use, the regeneration of biosensor surfaces using chemical approaches has been leveraged as an approach for creating multiple-use biosensors.
T1085 377-572 Sentence denotes Biosensor regeneration approaches typically involve chemically-mediated dissociation of the target from the immobilized biorecognition element or removal of the biorecognition element altogether.
T1086 573-786 Sentence denotes This can be accomplished through acid-base mediated regeneration, detergents, glycine, and urea as well as achieved by thermal regeneration, plasma cleaning, or even direct electrochemical desorption (Goode et al.
T1087 787-805 Sentence denotes 2015; Huang et al.
T1088 806-833 Sentence denotes 2010; Zelada-Guillen et al.
T1089 834-840 Sentence denotes 2010).
T1090 841-1064 Sentence denotes For example, Dweik et al. used a combination of organic (acetone) and plasma cleaning protocols to regenerate an Au interdigitated microelectrode array after detection of E. coli to use devices five times each (Dweik et al.
T1091 1065-1071 Sentence denotes 2012).
T1092 1072-1352 Sentence denotes Johnson and Mutharasan used a liquid-phase hydrogen peroxide-mediated UV-photooxidation process for regeneration of biosensor surfaces as an alternative to aggressive chemical treatments, such as those based on the use of high- or low-pH solutions (Johnson and Mutharasan, 2013b).
T1093 1353-1598 Sentence denotes We note that an ideal biosensor regeneration (i.e., cleaning) approach for process monitoring applications would remove the captured target in situ using a chemical-free approach and preserve the biorecognition layer for subsequent measurements.

2_test

Id Subject Object Predicate Lexical cue
32364936-25402969-7713196 787-791 25402969 denotes 2015
32364936-19932018-7713197 806-810 19932018 denotes 2010
32364936-20961052-7713198 834-838 20961052 denotes 2010
32364936-22608418-7713199 1065-1069 22608418 denotes 2012