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PMC:7152526 / 784-2002 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
43 15-62 Species denotes severe acute respiratory syndrome coronavirus-2 Tax:2697049
44 64-74 Species denotes SARS-CoV-2 Tax:2697049
45 377-383 Species denotes people Tax:9606
46 407-413 Species denotes people Tax:9606
47 755-763 Species denotes patients Tax:9606
48 968-976 Species denotes patients Tax:9606
49 76-85 Disease denotes infection MESH:D007239
50 232-256 Disease denotes coronavirus disease 2019 MESH:C000657245
51 258-266 Disease denotes COVID-19 MESH:C000657245
52 389-397 Disease denotes infected MESH:D007239
53 616-632 Disease denotes viral infections MESH:D001102
54 650-682 Disease denotes Middle East respiratory syndrome MESH:D018352
55 684-688 Disease denotes MERS MESH:D018352
56 697-710 Disease denotes virus disease MESH:D001102
57 893-901 Disease denotes COVID-19 MESH:C000657245
58 959-967 Disease denotes COVID-19 MESH:C000657245
59 988-1023 Disease denotes acute respiratory distress syndrome MESH:D012128
60 1025-1029 Disease denotes ARDS MESH:D012128
61 1188-1208 Disease denotes SARS-CoV-2 infection MESH:C000657245

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T6 591-597 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T7 873-879 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T8 1094-1100 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T9 1163-1169 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T14 15-62 Disease denotes severe acute respiratory syndrome coronavirus-2 http://purl.obolibrary.org/obo/MONDO_0100096
T15 15-48 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T16 64-72 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T17 76-85 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T18 232-256 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T19 258-266 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T20 616-632 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T21 644-648 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T22 691-710 Disease denotes Ebola virus disease http://purl.obolibrary.org/obo/MONDO_0005737
T23 714-723 Disease denotes avian flu http://purl.obolibrary.org/obo/MONDO_0018695
T24 720-723 Disease denotes flu http://purl.obolibrary.org/obo/MONDO_0005812
T25 893-901 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T26 959-967 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T27 988-1023 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T28 994-1023 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T29 1025-1029 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T30 1188-1196 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T31 1199-1208 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T9 116-119 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T10 131-132 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 186-198 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T12 472-477 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T13 591-597 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T14 697-702 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T15 873-879 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T16 1043-1044 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 1094-1100 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T18 1163-1169 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T2 616-632 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T9 0-168 Sentence denotes An outbreak of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) infection, which began in Wuhan, China, has emerged as a primary concern all over the world.
T10 169-341 Sentence denotes The World Health Organization announced the risk assessment of coronavirus disease 2019 (COVID-19) as very high at the global level, and fatal cases are rapidly increasing.
T11 342-435 Sentence denotes By March 24, 2020, more than 9,000 people were infected, and 126 people died, in South Korea.
T12 436-546 Sentence denotes Without specific treatments for the virus, treatment options are being studied in addition to supportive care.
T13 547-922 Sentence denotes Evidence shows that the use of convalescent plasma to treat emerging viral infections, including SARS, Middle East respiratory syndrome (MERS), Ebola virus disease or avian flu, can improve survival rates in patients whose condition worsens even with conventional treatment.12 However, the safety and efficacy of convalescent plasma treatment in COVID-19 have not been known.
T14 923-1110 Sentence denotes Here, we report two cases of severe COVID-19 patients presenting acute respiratory distress syndrome (ARDS), who showed a favorable clinical course after the convalescent plasma infusion.
T15 1111-1218 Sentence denotes This is the first report of the use of convalescent plasma to treat cases of SARS-CoV-2 infection in Korea.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T4 994-1014 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T17 15-27 SP_7 denotes severe acute
T18 28-39 SP_7;UBERON:0001004 denotes respiratory
T19 40-62 SP_7 denotes syndrome coronavirus-2
T20 64-74 SP_7 denotes SARS-CoV-2
T21 232-243 NCBITaxon:11118 denotes coronavirus
T22 258-266 SP_7 denotes COVID-19
T23 377-383 NCBITaxon:9606 denotes people
T24 407-413 NCBITaxon:9606 denotes people
T25 414-418 GO:0016265 denotes died
T26 472-477 NCBITaxon:10239 denotes virus
T27 591-597 UBERON:0001969 denotes plasma
T28 616-621 NCBITaxon:10239 denotes viral
T29 644-648 SP_10 denotes SARS
T30 662-673 UBERON:0001004 denotes respiratory
T31 684-688 SP_9 denotes MERS
T32 691-702 NCBITaxon:10376 denotes Ebola virus
T33 714-719 NCBITaxon:8782 denotes avian
T34 873-879 UBERON:0001969 denotes plasma
T35 893-901 SP_7 denotes COVID-19
T36 959-967 SP_7 denotes COVID-19
T37 994-1005 UBERON:0001004 denotes respiratory
T38 1094-1100 UBERON:0001969 denotes plasma
T39 1163-1169 UBERON:0001969 denotes plasma
T40 1188-1198 SP_7 denotes SARS-CoV-2
T70532 15-27 SP_7 denotes severe acute
T14342 28-39 SP_7;UBERON:0001004 denotes respiratory
T74599 40-62 SP_7 denotes syndrome coronavirus-2
T79195 64-74 SP_7 denotes SARS-CoV-2
T83579 232-243 NCBITaxon:11118 denotes coronavirus
T36882 258-266 SP_7 denotes COVID-19
T55903 377-383 NCBITaxon:9606 denotes people
T47471 407-413 NCBITaxon:9606 denotes people
T15517 414-418 GO:0016265 denotes died
T97192 472-477 NCBITaxon:10239 denotes virus
T99365 591-597 UBERON:0001969 denotes plasma
T77634 616-621 NCBITaxon:10239 denotes viral
T59960 644-648 SP_10 denotes SARS
T84547 662-673 UBERON:0001004 denotes respiratory
T71599 684-688 SP_9 denotes MERS
T80133 691-702 NCBITaxon:10376 denotes Ebola virus
T77082 714-719 NCBITaxon:8782 denotes avian
T63209 873-879 UBERON:0001969 denotes plasma
T69584 893-901 SP_7 denotes COVID-19
T21314 959-967 SP_7 denotes COVID-19
T82774 994-1005 UBERON:0001004 denotes respiratory
T68959 1094-1100 UBERON:0001969 denotes plasma
T71185 1163-1169 UBERON:0001969 denotes plasma
T71769 1188-1198 SP_7 denotes SARS-CoV-2

2_test

Id Subject Object Predicate Lexical cue
32281317-25030060-61647281 821-822 25030060 denotes 1
32281317-26674811-61647282 821-823 26674811 denotes 12