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PMC:7144273 / 12405-12733 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T322 49-53 SO:0000704;GO:0010467 denotes gene
T323 54-64 GO:0010467 denotes expression
T324 94-99 SO:0000704 denotes genes
T325 110-115 SP_6;NCBITaxon:9606 denotes human
T326 116-127 CL:0002540;UBERON:0002371 denotes bone marrow
T327 136-147 UBERON:0003104;CL:0002540 denotes mesenchymal
T328 148-152 CL:0002540 denotes stem
T329 154-161 CL:0000499;UBERON:0003891 denotes stromal
T330 173-177 DG_47 denotes MSCs
T331 222-236 PR:000001136 denotes interleukin-1β
T20978 49-53 SO:0000704;GO:0010467 denotes gene
T69876 54-64 GO:0010467 denotes expression
T38791 94-99 SO:0000704 denotes genes
T83557 110-115 SP_6;NCBITaxon:9606 denotes human
T58907 116-127 CL:0002540;UBERON:0002371 denotes bone marrow
T22586 136-147 UBERON:0003104;CL:0002540 denotes mesenchymal
T55901 148-152 CL:0002540 denotes stem
T72312 154-161 CL:0000499;UBERON:0003891 denotes stromal
T24390 173-177 DG_47 denotes MSCs
T71177 222-236 PR:000001136 denotes interleukin-1β

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T111 49-53 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T112 116-127 Body_part denotes bone marrow http://purl.org/sig/ont/fma/fma9608
T113 163-168 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T114 211-220 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T115 222-235 Body_part denotes interleukin-1 http://purl.org/sig/ont/fma/fma86583

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T28 116-127 Body_part denotes bone marrow http://purl.obolibrary.org/obo/UBERON_0002371

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T147 49-53 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T148 94-99 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T149 110-115 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T150 116-120 http://purl.obolibrary.org/obo/UBERON_0002481 denotes bone
T151 153-168 http://purl.obolibrary.org/obo/CL_0000499 denotes (stromal) cells
T152 170-172 http://purl.obolibrary.org/obo/CLO_0001997 denotes BM
T153 179-188 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated
T154 222-235 http://purl.obolibrary.org/obo/PR_000001091 denotes interleukin-1

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T60 72-82 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T61 267-277 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T62 279-282 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T36 49-64 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T37 245-253 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T38 245-253 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T39 245-253 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T40 245-253 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T19 238-244 Phenotype denotes tumour http://purl.obolibrary.org/obo/HP_0002664

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T60 0-328 Sentence denotes FIGURE 2 Representative volcano plot analysis of gene expression of the interferon-stimulated genes (ISGs) in human bone marrow-derived mesenchymal stem (stromal) cells (BM-MSCs) activated with pro-inflammatory cytokines (interleukin-1β, tumour necrosis factor-α and interferon (IFN)-γ), versus control, in GEO dataset GSE68610.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
426 110-115 Species denotes human Tax:9606
428 72-82 Gene denotes interferon Gene:3439