PMC:7143804 / 4055-6684
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
69 | 1418-1426 | Chemical | denotes | polymers | MESH:D011108 |
70 | 1978-1983 | Chemical | denotes | metal | MESH:D008670 |
71 | 2014-2016 | Chemical | denotes | Cu | MESH:D003300 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T16 | 588-591 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
T17 | 1514-1517 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T17 | 2469-2472 | Disease | denotes | PID | http://purl.obolibrary.org/obo/MONDO_0000922 |
T18 | 2503-2506 | Disease | denotes | PID | http://purl.obolibrary.org/obo/MONDO_0000922 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T35 | 89-90 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T36 | 267-268 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T37 | 274-281 | http://purl.obolibrary.org/obo/OBI_0000968 | denotes | devices |
T38 | 579-584 | http://purl.obolibrary.org/obo/UBERON_0007688 | denotes | field |
T39 | 935-936 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T40 | 974-975 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T41 | 1341-1342 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T42 | 1479-1480 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T43 | 1486-1493 | http://purl.obolibrary.org/obo/OBI_0000968 | denotes | devices |
T44 | 1590-1591 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T45 | 2159-2160 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T46 | 2267-2268 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T47 | 2433-2434 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T48 | 2565-2566 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T22 | 588-591 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
T23 | 1418-1426 | Chemical | denotes | polymers | http://purl.obolibrary.org/obo/CHEBI_33839 |
T24 | 1514-1517 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
T25 | 2014-2016 | Chemical | denotes | Cu | http://purl.obolibrary.org/obo/CHEBI_28694 |
T26 | 2469-2472 | Chemical | denotes | PID | http://purl.obolibrary.org/obo/CHEBI_8066 |
T27 | 2503-2506 | Chemical | denotes | PID | http://purl.obolibrary.org/obo/CHEBI_8066 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4 | 588-605 | http://purl.obolibrary.org/obo/GO_0006277 | denotes | DNA amplification |
T5 | 1514-1531 | http://purl.obolibrary.org/obo/GO_0006277 | denotes | DNA amplification |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T36 | 0-66 | Sentence | denotes | With respect to heat supply, different methods have been employed. |
T37 | 67-179 | Sentence | denotes | Almassian et al. give a comprehensive overview of different possible heating methods in their review paper [12]. |
T38 | 180-329 | Sentence | denotes | Not all of the mentioned methods are easy to implement in low-cost and portable lab-on-a-chip devices due to their bulkiness or implementation costs. |
T39 | 330-439 | Sentence | denotes | Examples of these rather difficult methods are using heating via induction, infrared, or microwave radiation. |
T40 | 440-567 | Sentence | denotes | Others are not useful due ot their challenging temperature control, like with heating up the system using exothermic reactions. |
T41 | 568-651 | Sentence | denotes | Within the field of DNA amplification, different mechanisms of amplification exist. |
T42 | 652-737 | Sentence | denotes | Some are based on thermo cycling processes, e.g., PCR, whereas others are isothermal. |
T43 | 738-825 | Sentence | denotes | The use of an isothermal amplification technique puts less requirements on the heaters. |
T44 | 826-1019 | Sentence | denotes | Isothermal processes are either truly isothermal or consisting of three different temperatures, as they have a thermal denaturation step before and a termination step after the elongation step. |
T45 | 1020-1169 | Sentence | denotes | The switching between these temperature steps does not have to be as fast as with thermal cycling steps in, for example, PCR amplification reactions. |
T46 | 1170-1302 | Sentence | denotes | The use of less temperature variations makes it easier to maintain the set temperature as there is less heating an cooling involved. |
T47 | 1303-1427 | Sentence | denotes | Furthermore, it eliminates the use of a continuous flow approach in systems with low thermal conductivities, e.g., polymers. |
T48 | 1428-1502 | Sentence | denotes | Therefore, it is easier to implement within lab-on-a-chip devices [17,21]. |
T49 | 1503-1660 | Sentence | denotes | Isothermal DNA amplification reactions can already be performed by putting the chip on a commercially available hotplate [22,23] or Peltier elements [24,25]. |
T50 | 1661-1722 | Sentence | denotes | However, these heating systems are bulky and power-consuming. |
T51 | 1723-1810 | Sentence | denotes | Therefore, they are not useful for portable equipment or operation at remote locations. |
T52 | 1811-1876 | Sentence | denotes | Miniaturizing heaters lowers the bulkiness and power consumption. |
T53 | 1877-2065 | Sentence | denotes | Miniaturized heaters can be integrated as integrated resistive heaters, e.g., as deposited thin-film metal [26,27,28,29] or as laminated Cu foil [30], or as micro-Peltier elements [31,32]. |
T54 | 2066-2245 | Sentence | denotes | These miniaturized heaters can be implemented directly onto the microfluidic chip [28] or on a different substrate and leter incorporated onto the microfluidic chip [33,34,35,36]. |
T55 | 2246-2369 | Sentence | denotes | The geometry of such a heater contributes significantly to the uniformity of the heat distribution within the chip [26,37]. |
T56 | 2370-2496 | Sentence | denotes | One method to accurately control the temperature is the use of a proportional-integral-derivative (PID) controlled thermostat. |
T57 | 2497-2629 | Sentence | denotes | These PID controllers are coupled to the electrical heaters and use a thermocouple as feedback-loop to the controller [22,23,24,25]. |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32106462-24030680-69893279 | 175-177 | 24030680 | denotes | 12 |
32106462-21387067-69893280 | 1495-1497 | 21387067 | denotes | 17 |
32106462-22592150-69893281 | 1498-1500 | 22592150 | denotes | 21 |
32106462-21479543-69893282 | 1625-1627 | 21479543 | denotes | 22 |
32106462-23610705-69893283 | 1628-1630 | 23610705 | denotes | 23 |
32106462-21267083-69893284 | 1653-1655 | 21267083 | denotes | 24 |
32106462-22038328-69893285 | 1656-1658 | 22038328 | denotes | 25 |
32106462-15269812-69893286 | 2232-2234 | 15269812 | denotes | 33 |
32106462-18975094-69893287 | 2235-2237 | 18975094 | denotes | 34 |
32106462-21479543-69893288 | 2616-2618 | 21479543 | denotes | 22 |
32106462-23610705-69893289 | 2619-2621 | 23610705 | denotes | 23 |
32106462-21267083-69893290 | 2622-2624 | 21267083 | denotes | 24 |
32106462-22038328-69893291 | 2625-2627 | 22038328 | denotes | 25 |