PMC:7140597 / 1396-1961 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7140597","sourcedb":"PMC","sourceid":"7140597","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7140597","text":"deaths [4].\nTo gain further understanding on the molecular epidemiology of the outbreak in Italy, we characterised the full-genome sequence of two SARS-CoV-2 strains respectively isolated from two patients diagnosed in the country. The first patient was a Chinese tourist from Wuhan diagnosed at the end of January, who had visited Rome and not been in areas of Italy later found to be the initially affected areas of the epidemic in Lombardy. The second patient was an Italian person, with no apparent direct epidemiological link with China and who was diagnosed i","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"29","span":{"begin":0,"end":6},"obj":"Disease"},{"id":"34","span":{"begin":147,"end":157},"obj":"Species"},{"id":"35","span":{"begin":197,"end":205},"obj":"Species"},{"id":"36","span":{"begin":242,"end":249},"obj":"Species"},{"id":"37","span":{"begin":455,"end":462},"obj":"Species"}],"attributes":[{"id":"A29","pred":"tao:has_database_id","subj":"29","obj":"MESH:D003643"},{"id":"A34","pred":"tao:has_database_id","subj":"34","obj":"Tax:2697049"},{"id":"A35","pred":"tao:has_database_id","subj":"35","obj":"Tax:9606"},{"id":"A36","pred":"tao:has_database_id","subj":"36","obj":"Tax:9606"},{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"Tax:9606"},{"subj":"29","pred":"source","obj":"LitCovid-PubTator"},{"subj":"34","pred":"source","obj":"LitCovid-PubTator"},{"subj":"35","pred":"source","obj":"LitCovid-PubTator"},{"subj":"36","pred":"source","obj":"LitCovid-PubTator"},{"subj":"37","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T3","span":{"begin":124,"end":130},"obj":"Body_part"}],"attributes":[{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma84116"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T10","span":{"begin":147,"end":155},"obj":"Disease"}],"attributes":[{"id":"A10","pred":"mondo_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T9","span":{"begin":254,"end":255},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T9","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T10","span":{"begin":12,"end":231},"obj":"Sentence"},{"id":"T11","span":{"begin":232,"end":443},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T10","pred":"source","obj":"LitCovid-sentences"},{"subj":"T11","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T18","span":{"begin":0,"end":6},"obj":"GO:0016265"},{"id":"T19","span":{"begin":124,"end":130},"obj":"SO:0001026"},{"id":"T20","span":{"begin":147,"end":157},"obj":"SP_7"},{"id":"T21","span":{"begin":478,"end":484},"obj":"NCBITaxon:9606"},{"id":"T91369","span":{"begin":0,"end":6},"obj":"GO:0016265"},{"id":"T62477","span":{"begin":124,"end":130},"obj":"SO:0001026"},{"id":"T77180","span":{"begin":147,"end":157},"obj":"SP_7"},{"id":"T27533","span":{"begin":478,"end":484},"obj":"NCBITaxon:9606"}],"attributes":[{"subj":"T18","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T19","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T20","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T21","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T91369","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T62477","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T77180","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T27533","pred":"source","obj":"LitCovid-PMC-OGER-BB"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#ecb993","default":true},{"id":"LitCovid-PD-FMA-UBERON","color":"#9f93ec"},{"id":"LitCovid-PD-MONDO","color":"#a0ec93"},{"id":"LitCovid-PD-CLO","color":"#ec93bb"},{"id":"LitCovid-sentences","color":"#93d5ec"},{"id":"LitCovid-PMC-OGER-BB","color":"#ece993"}]}]}}