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PMC:7128678 / 472-1164 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
21 11-22 Chemical denotes chloroquine MESH:D002738
48 546-551 Gene denotes ACE-2 Gene:59272
50 418-423 Gene denotes spike Gene:43740568
53 79-97 Species denotes SARS-coronavirus 2 Tax:2697049
54 99-109 Species denotes SARS-CoV-2 Tax:2697049
55 278-286 Species denotes patients Tax:9606
60 512-524 Chemical denotes angiotension
61 582-594 Chemical denotes sialic acids MESH:D012794
62 623-635 Chemical denotes gangliosides MESH:D005732
72 269-277 Disease denotes infected MESH:D007239

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T11 11-22 CHEBI:3638;DG_10;CHEBI:3638 denotes chloroquine
T20 79-83 SP_10 denotes SARS
T21 84-95 NCBITaxon:11118 denotes coronavirus
T22 99-109 SP_7 denotes SARS-CoV-2
T23 187-191 CHEBI:23888;CHEBI:23888 denotes drug
T24 324-329 NCBITaxon:10239;GO:0006260 denotes viral
T25 330-341 GO:0006260 denotes replication
T26 372-382 GO:0009986 denotes surface of
T27 383-394 GO:0045333;CL:0000082 denotes respiratory
T28 395-400 CL:0000082 denotes cells
T29 428-433 NCBITaxon:10239 denotes viral
T30 493-502 PG_1 denotes S protein
T31 546-551 G_3;PG_10;PR:000003622 denotes ACE-2
T32 582-588 CHEBI:30563;CHEBI:30563 denotes sialic
T33 589-594 CHEBI:41865;CHEBI:41865 denotes acids
T34 605-622 GO:0044228 denotes host cell surface
T35 623-635 CHEBI:28892;CHEBI:28892 denotes gangliosides
T69104 11-22 CHEBI:3638;DG_10;CHEBI:3638 denotes chloroquine

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 395-400 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T2 434-441 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T3 495-502 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T4 610-622 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T5 610-614 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T6 623-635 Body_part denotes gangliosides http://purl.org/sig/ont/fma/fma82816

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T6 79-95 Disease denotes SARS-coronavirus http://purl.obolibrary.org/obo/MONDO_0005091
T7 99-107 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T3 130-131 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 395-400 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5 610-614 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T6 643-644 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T7 11-22 Chemical denotes chloroquine http://purl.obolibrary.org/obo/CHEBI_3638
T8 187-191 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T9 434-441 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T10 495-502 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T11 582-594 Chemical denotes sialic acids http://purl.obolibrary.org/obo/CHEBI_26667
T12 589-594 Chemical denotes acids http://purl.obolibrary.org/obo/CHEBI_37527
T13 623-635 Chemical denotes gangliosides http://purl.obolibrary.org/obo/CHEBI_28892

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 324-341 http://purl.obolibrary.org/obo/GO_0019079 denotes viral replication
T2 324-341 http://purl.obolibrary.org/obo/GO_0019058 denotes viral replication

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T8 25-33 Sentence denotes Abstract
T9 34-151 Sentence denotes The recent emergence of the novel pathogenic SARS-coronavirus 2 (SARS-CoV-2) is responsible for a worldwide pandemic.
T10 152-301 Sentence denotes Given the global health emergency, drug repositioning is the most reliable option to design an efficient therapy for infected patients without delay.
T11 302-488 Sentence denotes The first step of the viral replication cycle [i.e. attachment to the surface of respiratory cells, mediated by the spike (S) viral protein] offers several potential therapeutic targets.
T12 489-636 Sentence denotes The S protein uses the angiotension-converting enzyme-2 (ACE-2) receptor for entry, but also sialic acids linked to host cell surface gangliosides.