PMC:7128678 / 4016-4354
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 117 | 65-70 | Gene | denotes | spike | Gene:43740568 |
| 118 | 72-73 | Gene | denotes | S | Gene:43740568 |
| 119 | 169-170 | Gene | denotes | S | Gene:43740568 |
| 122 | 91-101 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 130 | 2-13 | Chemical | denotes | ganglioside | MESH:D005732 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T92 | 2-13 | CHEBI:28892;CHEBI:28892 | denotes | ganglioside |
| T93 | 14-26 | SO:0000409 | denotes | binding site |
| T94 | 45-51 | SO:0000417 | denotes | domain |
| T95 | 75-87 | CHEBI:17089;CHEBI:17089;BV_11 | denotes | glycoprotein |
| T96 | 91-101 | SP_7 | denotes | SARS-CoV-2 |
| T97 | 171-182 | CHEBI:28892;CHEBI:28892 | denotes | ganglioside |
| T98 | 233-238 | NCBITaxon:10239;GO:0006260 | denotes | viral |
| T99 | 239-250 | GO:0006260 | denotes | replication |
| T100 | 281-291 | GO:0009986 | denotes | surface of |
| T101 | 292-303 | GO:0045333;CL:0000100 | denotes | respiratory |
| T102 | 304-309 | CL:0000100 | denotes | cells |
| T103 | 327-336 | PG_1 | denotes | S protein |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T23 | 2-13 | Body_part | denotes | ganglioside | http://purl.org/sig/ont/fma/fma82816 |
| T24 | 75-87 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T25 | 171-182 | Body_part | denotes | ganglioside | http://purl.org/sig/ont/fma/fma82816 |
| T26 | 304-309 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T27 | 329-336 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T18 | 53-56 | Disease | denotes | NTD | http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075 |
| T20 | 91-99 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27 | 0-1 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T28 | 142-143 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T29 | 304-309 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T45 | 2-13 | Chemical | denotes | ganglioside | http://purl.obolibrary.org/obo/CHEBI_28892 |
| T46 | 75-87 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T47 | 171-182 | Chemical | denotes | ganglioside | http://purl.obolibrary.org/obo/CHEBI_28892 |
| T48 | 329-336 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 233-250 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
| T6 | 233-250 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T30 | 0-338 | Sentence | denotes | A ganglioside-binding site in the N-terminal domain (NTD) of the spike (S) glycoprotein of SARS-CoV-2 was identified, and CLQ was shown to be a potential blocker of the S–ganglioside interaction which occurs in the first step of the viral replication cycle (i.e. attachment to the surface of respiratory cells, mediated by the S protein). |