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PMC:7128678 / 16142-17074 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
494 131-142 Chemical denotes ganglioside MESH:D005732
495 373-376 Chemical denotes Gly MESH:D005998
496 378-381 Chemical denotes Pro MESH:D011392
497 389-392 Chemical denotes Ser MESH:D012694
498 489-500 Chemical denotes ganglioside MESH:D005732
499 732-735 Chemical denotes Gly MESH:D005998
500 737-740 Chemical denotes Pro MESH:D011392
501 748-751 Chemical denotes Ser MESH:D012694
502 785-796 Chemical denotes ganglioside MESH:D005732
503 899-910 Chemical denotes ganglioside MESH:D005732

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T362 121-130 SO:0000993 denotes consensus
T363 131-142 CHEBI:16856;CHEBI:16856 denotes ganglioside
T364 151-158 SO:0000417 denotes domains
T365 489-500 CHEBI:28892;CHEBI:28892 denotes ganglioside
T366 509-515 SO:0000417 denotes domain
T367 785-796 CHEBI:28892;CHEBI:28892 denotes ganglioside
T368 899-910 CHEBI:28892;CHEBI:28892 denotes ganglioside

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T86 4-14 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T87 131-142 Body_part denotes ganglioside http://purl.org/sig/ont/fma/fma82816
T88 218-228 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T89 351-361 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T90 489-500 Body_part denotes ganglioside http://purl.org/sig/ont/fma/fma82816
T91 699-709 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T92 785-796 Body_part denotes ganglioside http://purl.org/sig/ont/fma/fma82816
T93 899-910 Body_part denotes ganglioside http://purl.org/sig/ont/fma/fma82816

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T10 73-76 Body_part denotes tip http://purl.obolibrary.org/obo/UBERON_2001840
T11 862-865 Body_part denotes tip http://purl.obolibrary.org/obo/UBERON_2001840

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T47 84-87 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075
T49 538-541 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075
T51 873-876 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T115 197-198 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T116 218-237 http://purl.obolibrary.org/obo/CHEBI_33708 denotes amino acid residues
T117 218-237 http://purl.obolibrary.org/obo/PR_000036907 denotes amino acid residues
T118 891-892 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T298 4-14 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T299 4-9 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T300 10-14 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T301 131-142 Chemical denotes ganglioside http://purl.obolibrary.org/obo/CHEBI_28892
T302 218-228 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T303 218-223 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T304 224-228 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T305 351-361 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T306 351-356 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T307 357-361 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T308 373-376 Chemical denotes Gly http://purl.obolibrary.org/obo/CHEBI_15428
T309 378-381 Chemical denotes Pro http://purl.obolibrary.org/obo/CHEBI_50342
T310 389-392 Chemical denotes Ser http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999
T312 414-425 Chemical denotes application http://purl.obolibrary.org/obo/CHEBI_33232
T313 489-500 Chemical denotes ganglioside http://purl.obolibrary.org/obo/CHEBI_28892
T314 699-709 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T315 699-704 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T316 705-709 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T317 732-735 Chemical denotes Gly http://purl.obolibrary.org/obo/CHEBI_15428
T318 737-740 Chemical denotes Pro http://purl.obolibrary.org/obo/CHEBI_50342
T319 748-751 Chemical denotes Ser http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999
T321 785-796 Chemical denotes ganglioside http://purl.obolibrary.org/obo/CHEBI_28892
T322 899-910 Chemical denotes ganglioside http://purl.obolibrary.org/obo/CHEBI_28892

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T113 0-164 Sentence denotes The amino acid sequence of the planar interfacial surface located at the tip of the NTD was analysed for the presence of consensus ganglioside-binding domains [20].
T114 165-272 Sentence denotes These motifs are constituted by a triad of mandatory amino acid residues such as (K,R)-Xn-(F,Y,W)-Xn-(K,R).
T115 273-402 Sentence denotes The Xn intercalating segments, usually four to five residues, may contain any amino acid, but often Gly, Pro and/or Ser residues.
T116 403-542 Sentence denotes The strict application of this algorithm did not allow the detection of any potential ganglioside-binding domain in this region of the NTD.
T117 543-650 Sentence denotes However, an intriguing over-representation of aromatic and basic residues was found in the 129–158 segment:
T118 651-690 Sentence denotes 129-KVCEFQFCNDPFLGVYYHKNNKSWMESEFR-158.
T119 691-812 Sentence denotes This 30-amino acid stretch also contains Gly, Pro and/or Ser residues that are often found in ganglioside-binding motifs.
T120 813-932 Sentence denotes These observations supported the notion that the tip of the NTD could display a large ganglioside-attachment interface.