PMC:7128678 / 15651-16141
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
481 | 143-154 | Chemical | denotes | ganglioside | MESH:D005732 |
482 | 423-434 | Chemical | denotes | ganglioside | MESH:D005732 |
483 | 479-484 | Chemical | denotes | lipid | MESH:D008055 |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T352 | 79-84 | G_3;PG_10;PR:000003622 | denotes | ACE-2 |
T353 | 143-154 | CHEBI:16856;CHEBI:16856 | denotes | ganglioside |
T354 | 198-204 | SO:0000417 | denotes | domain |
T355 | 212-213 | PG_18 | denotes | S |
T356 | 214-226 | PG_18;CHEBI:17089;CHEBI:17089;BV_11 | denotes | glycoprotein |
T357 | 423-434 | CHEBI:5386;CHEBI:5386 | denotes | ganglioside |
T358 | 440-455 | GO:0005886 | denotes | plasma membrane |
T359 | 456-467 | GO:0098857 | denotes | microdomain |
T360 | 479-484 | CHEBI:18059;CHEBI:18059;GO:0045121 | denotes | lipid |
T361 | 485-489 | GO:0045121 | denotes | raft |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T79 | 143-154 | Body_part | denotes | ganglioside | http://purl.org/sig/ont/fma/fma82816 |
T80 | 182-186 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T81 | 214-226 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
T82 | 278-288 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
T83 | 423-434 | Body_part | denotes | ganglioside | http://purl.org/sig/ont/fma/fma82816 |
T84 | 440-455 | Body_part | denotes | plasma membrane | http://purl.org/sig/ont/fma/fma63841 |
T85 | 479-484 | Body_part | denotes | lipid | http://purl.org/sig/ont/fma/fma67264 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T9 | 303-306 | Body_part | denotes | tip | http://purl.obolibrary.org/obo/UBERON_2001840 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T41 | 237-240 | Disease | denotes | NTD | http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075 |
T43 | 247-250 | Disease | denotes | NTD | http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075 |
T45 | 314-317 | Disease | denotes | NTD | http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T107 | 182-186 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T108 | 278-297 | http://purl.obolibrary.org/obo/CHEBI_33708 | denotes | amino acid residues |
T109 | 278-297 | http://purl.obolibrary.org/obo/PR_000036907 | denotes | amino acid residues |
T110 | 361-362 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T111 | 421-422 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T112 | 440-446 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
T113 | 447-455 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
T114 | 477-478 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T291 | 143-154 | Chemical | denotes | ganglioside | http://purl.obolibrary.org/obo/CHEBI_28892 |
T292 | 214-226 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
T293 | 278-288 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
T294 | 278-283 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
T295 | 284-288 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
T296 | 423-434 | Chemical | denotes | ganglioside | http://purl.obolibrary.org/obo/CHEBI_28892 |
T297 | 479-484 | Chemical | denotes | lipid | http://purl.obolibrary.org/obo/CHEBI_18059 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T110 | 0-242 | Sentence | denotes | It was reasoned that if the RBD is engaged in functional interactions with the ACE-2 receptor, it would be interesting to search for potential ganglioside-binding sites on the other cell-accessible domain of the S glycoprotein (i.e. the NTD). |
T111 | 243-298 | Sentence | denotes | The NTD contains approximately 290 amino acid residues. |
T112 | 299-490 | Sentence | denotes | The tip of the NTD was of particular interest, as it displays a flat interface Fig. 5(f) ideally positioned for targeting a ganglioside-rich plasma membrane microdomain, such as a lipid raft. |