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PMC:7126544 / 52509-53143 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T176 81-92 Body_part denotes hepatocytes http://purl.org/sig/ont/fma/fma14515
T177 136-141 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T178 142-149 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T179 156-160 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T180 161-164 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T181 219-238 Body_part denotes respiratory systems http://purl.org/sig/ont/fma/fma7158
T182 307-311 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T183 339-343 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T184 345-354 Body_part denotes esophagus http://purl.org/sig/ont/fma/fma7131
T185 365-370 Body_part denotes ileum http://purl.org/sig/ont/fma/fma7208
T186 375-380 Body_part denotes colon http://purl.org/sig/ont/fma/fma14543
T187 397-413 Body_part denotes digestive system http://purl.org/sig/ont/fma/fma7152
T188 504-508 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T189 513-518 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T190 520-529 Body_part denotes esophagus http://purl.org/sig/ont/fma/fma7131
T191 551-567 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T192 562-567 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T193 591-602 Body_part denotes enterocytes http://purl.org/sig/ont/fma/fma62122
T194 612-617 Body_part denotes ileum http://purl.org/sig/ont/fma/fma7208
T195 622-627 Body_part denotes colon http://purl.org/sig/ont/fma/fma14543

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T57 136-141 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T58 219-238 Body_part denotes respiratory systems http://purl.obolibrary.org/obo/UBERON_0001004
T59 339-343 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T60 345-354 Body_part denotes esophagus http://purl.obolibrary.org/obo/UBERON_0001043
T61 365-370 Body_part denotes ileum http://purl.obolibrary.org/obo/UBERON_0002116
T62 375-380 Body_part denotes colon http://purl.obolibrary.org/obo/UBERON_0001155
T63 397-413 Body_part denotes digestive system http://purl.obolibrary.org/obo/UBERON_0001007
T64 504-508 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T65 520-529 Body_part denotes esophagus http://purl.obolibrary.org/obo/UBERON_0001043
T66 612-617 Body_part denotes ileum http://purl.obolibrary.org/obo/UBERON_0002116
T67 622-627 Body_part denotes colon http://purl.obolibrary.org/obo/UBERON_0001155

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T466 0-8 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T467 0-4 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T468 262-270 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T469 262-266 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T470 453-461 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T464 136-141 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T465 136-141 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T466 156-160 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T467 219-238 http://purl.obolibrary.org/obo/UBERON_0001004 denotes respiratory systems
T468 242-243 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T469 307-311 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T470 339-343 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T471 339-343 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T472 345-354 http://purl.obolibrary.org/obo/UBERON_0001043 denotes esophagus
T473 365-370 http://purl.obolibrary.org/obo/UBERON_0002116 denotes ileum
T474 375-380 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colon
T475 397-413 http://purl.obolibrary.org/obo/UBERON_0001007 denotes digestive system
T476 397-413 http://www.ebi.ac.uk/efo/EFO_0000793 denotes digestive system
T477 422-423 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T478 504-508 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T479 504-508 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T480 513-518 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T481 520-529 http://purl.obolibrary.org/obo/UBERON_0001043 denotes esophagus
T482 540-567 http://purl.obolibrary.org/obo/CL_0000079 denotes stratified epithelial cells
T483 612-617 http://purl.obolibrary.org/obo/UBERON_0002116 denotes ileum
T484 622-627 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colon

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T424 0-207 Sentence denotes SARS-CoV-2 may directly bind to ACE2 positive cholangiocytes but not necessarily hepatocytes via specific expression of ACE2 in healthy liver tissues using cell RNA-seq data of two independent cohorts [126].
T425 208-634 Sentence denotes Though the respiratory systems is a primary target of SARS-CoV-2, bioinformatic analysis of single-cell transcriptomes datasets of lung, esophagus, gastric, ileum and colon reveal that the digestive system is also a potential route of entry for COVID-19, as ACE2 was not only highly expressed in lung AT2 cells, esophagus upper and stratified epithelial cells but also in absorptive enterocytes from the ileum and colon [127].

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1401 32-36 Gene denotes ACE2 Gene:59272
1402 120-124 Gene denotes ACE2 Gene:59272
1403 466-470 Gene denotes ACE2 Gene:59272
1404 0-10 Species denotes SARS-CoV-2 Tax:2697049
1405 262-272 Species denotes SARS-CoV-2 Tax:2697049
1406 219-230 Species denotes respiratory Tax:12814
1407 453-461 Disease denotes COVID-19 MESH:C000657245