PMC:7126544 / 52509-53143
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T176 | 81-92 | Body_part | denotes | hepatocytes | http://purl.org/sig/ont/fma/fma14515 |
T177 | 136-141 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T178 | 142-149 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T179 | 156-160 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T180 | 161-164 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
T181 | 219-238 | Body_part | denotes | respiratory systems | http://purl.org/sig/ont/fma/fma7158 |
T182 | 307-311 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T183 | 339-343 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T184 | 345-354 | Body_part | denotes | esophagus | http://purl.org/sig/ont/fma/fma7131 |
T185 | 365-370 | Body_part | denotes | ileum | http://purl.org/sig/ont/fma/fma7208 |
T186 | 375-380 | Body_part | denotes | colon | http://purl.org/sig/ont/fma/fma14543 |
T187 | 397-413 | Body_part | denotes | digestive system | http://purl.org/sig/ont/fma/fma7152 |
T188 | 504-508 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T189 | 513-518 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T190 | 520-529 | Body_part | denotes | esophagus | http://purl.org/sig/ont/fma/fma7131 |
T191 | 551-567 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
T192 | 562-567 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T193 | 591-602 | Body_part | denotes | enterocytes | http://purl.org/sig/ont/fma/fma62122 |
T194 | 612-617 | Body_part | denotes | ileum | http://purl.org/sig/ont/fma/fma7208 |
T195 | 622-627 | Body_part | denotes | colon | http://purl.org/sig/ont/fma/fma14543 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T57 | 136-141 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T58 | 219-238 | Body_part | denotes | respiratory systems | http://purl.obolibrary.org/obo/UBERON_0001004 |
T59 | 339-343 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T60 | 345-354 | Body_part | denotes | esophagus | http://purl.obolibrary.org/obo/UBERON_0001043 |
T61 | 365-370 | Body_part | denotes | ileum | http://purl.obolibrary.org/obo/UBERON_0002116 |
T62 | 375-380 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/UBERON_0001155 |
T63 | 397-413 | Body_part | denotes | digestive system | http://purl.obolibrary.org/obo/UBERON_0001007 |
T64 | 504-508 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T65 | 520-529 | Body_part | denotes | esophagus | http://purl.obolibrary.org/obo/UBERON_0001043 |
T66 | 612-617 | Body_part | denotes | ileum | http://purl.obolibrary.org/obo/UBERON_0002116 |
T67 | 622-627 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/UBERON_0001155 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T466 | 0-8 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T467 | 0-4 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T468 | 262-270 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T469 | 262-266 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T470 | 453-461 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T464 | 136-141 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T465 | 136-141 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T466 | 156-160 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T467 | 219-238 | http://purl.obolibrary.org/obo/UBERON_0001004 | denotes | respiratory systems |
T468 | 242-243 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T469 | 307-311 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T470 | 339-343 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T471 | 339-343 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T472 | 345-354 | http://purl.obolibrary.org/obo/UBERON_0001043 | denotes | esophagus |
T473 | 365-370 | http://purl.obolibrary.org/obo/UBERON_0002116 | denotes | ileum |
T474 | 375-380 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colon |
T475 | 397-413 | http://purl.obolibrary.org/obo/UBERON_0001007 | denotes | digestive system |
T476 | 397-413 | http://www.ebi.ac.uk/efo/EFO_0000793 | denotes | digestive system |
T477 | 422-423 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T478 | 504-508 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T479 | 504-508 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T480 | 513-518 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T481 | 520-529 | http://purl.obolibrary.org/obo/UBERON_0001043 | denotes | esophagus |
T482 | 540-567 | http://purl.obolibrary.org/obo/CL_0000079 | denotes | stratified epithelial cells |
T483 | 612-617 | http://purl.obolibrary.org/obo/UBERON_0002116 | denotes | ileum |
T484 | 622-627 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colon |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T424 | 0-207 | Sentence | denotes | SARS-CoV-2 may directly bind to ACE2 positive cholangiocytes but not necessarily hepatocytes via specific expression of ACE2 in healthy liver tissues using cell RNA-seq data of two independent cohorts [126]. |
T425 | 208-634 | Sentence | denotes | Though the respiratory systems is a primary target of SARS-CoV-2, bioinformatic analysis of single-cell transcriptomes datasets of lung, esophagus, gastric, ileum and colon reveal that the digestive system is also a potential route of entry for COVID-19, as ACE2 was not only highly expressed in lung AT2 cells, esophagus upper and stratified epithelial cells but also in absorptive enterocytes from the ileum and colon [127]. |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1401 | 32-36 | Gene | denotes | ACE2 | Gene:59272 |
1402 | 120-124 | Gene | denotes | ACE2 | Gene:59272 |
1403 | 466-470 | Gene | denotes | ACE2 | Gene:59272 |
1404 | 0-10 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
1405 | 262-272 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
1406 | 219-230 | Species | denotes | respiratory | Tax:12814 |
1407 | 453-461 | Disease | denotes | COVID-19 | MESH:C000657245 |