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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
396 386-393 Species denotes patient Tax:9606
397 144-152 Disease denotes covid-19 MESH:C000657245
401 958-965 Species denotes patient Tax:9606
402 574-583 Disease denotes Mortality MESH:D003643
403 641-649 Disease denotes covid-19 MESH:C000657245
406 1326-1333 Species denotes patient Tax:9606
407 1306-1315 Disease denotes infection MESH:D007239
413 1809-1817 Disease denotes covid-19 MESH:C000657245
414 1976-1988 Disease denotes hypertension MESH:D006973
415 1999-2020 Disease denotes myocardial infarction MESH:D009203
416 2026-2032 Disease denotes stroke MESH:D020521
417 2195-2204 Disease denotes Mortality MESH:D003643
429 2248-2256 Species denotes patients Tax:9606
430 2319-2327 Species denotes patients Tax:9606
431 2501-2508 Species denotes patient Tax:9606
432 2578-2585 Species denotes patient Tax:9606
433 2647-2655 Species denotes patients Tax:9606
434 3001-3009 Species denotes patients Tax:9606
435 2422-2431 Disease denotes mortality MESH:D003643
436 2609-2618 Disease denotes Mortality MESH:D003643
437 2701-2710 Disease denotes mortality MESH:D003643
438 2879-2884 Disease denotes death MESH:D003643
439 2954-2963 Disease denotes Mortality MESH:D003643

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T176 0-39 Sentence denotes Strengths and limitations of this study
T177 40-245 Sentence denotes The ISARIC WHO CCP-UK study represents a large prospectively collected cohort admitted to hospital with covid-19 and reflects the clinical data available in most economically developed healthcare settings.
T178 246-422 Sentence denotes We derived a clinically applicable prediction score with clear methods and tested it against existing risk stratification scores in a large patient cohort admitted to hospital.
T179 423-566 Sentence denotes The score compared favourably with other prognostic tools, with good to excellent discrimination, calibration, and performance characteristics.
T180 567-668 Sentence denotes The 4C Mortality Score has several methodological advantages over current covid-19 prognostic scores.
T181 669-1100 Sentence denotes The use of penalised regression methods and an event-to-variable ratio greater than 100 reduce the risk of overfitting.4546 The use of parameters commonly available at first assessment increases its clinical applicability, avoiding the requirement for markers often only available after a patient has been admitted to a critical care facility.447 Of course a model developed in a specific dataset should describe that dataset best.
T182 1101-1267 Sentence denotes However, by including comparisons with pre-existing models, reassurance is provided that equivalent performance cannot be delivered with a simple tool already in use.
T183 1268-1385 Sentence denotes Additionally, in a pandemic, baseline infection rates and patient characteristics might change by time and geography.
T184 1386-1491 Sentence denotes This motivated the temporal and geographical validation, which is crucial to the reporting of this study.
T185 1492-1596 Sentence denotes These sensitivity analyses showed that score performance continued to be robust over time and geography.
T186 1597-1623 Sentence denotes Our study has limitations.
T187 1624-2073 Sentence denotes Firstly, we were unable to evaluate the predictive performance of several existing scores that require a large number of parameters (for example, APACHE II48), as well as several other covid-19 prognostic scores that use computed tomography findings or uncommonly measured biomarkers.5 Additionally, several potentially relevant comorbidities, such as hypertension, previous myocardial infarction, and stroke,16 were not included in data collection.
T188 2074-2211 Sentence denotes The inclusion of these comorbidities might have impacted upon or improved the performance and generalisability of the 4C Mortality Score.
T189 2212-2288 Sentence denotes Secondly, a proportion of recruited patients (3.3%) had incomplete episodes.
T190 2289-2470 Sentence denotes Selection bias is possible if patients with incomplete episodes, such as those with prolonged hospital admission, had a differential mortality risk to those with completed episodes.
T191 2471-2573 Sentence denotes Nevertheless, the size of our patient cohort compares favourably to other datasets for model creation.
T192 2574-2773 Sentence denotes The patient cohort on which the 4C Mortality Score was derived comprised patients admitted to hospital who were seriously ill (mortality rate of 32.2%) and were of advanced age (median age 73 years).
T193 2774-2885 Sentence denotes This model is not for use in the community and could perform differently in populations at lower risk of death.
T194 2886-3041 Sentence denotes Further external validation is required to determine whether the 4C Mortality Score is generalisable among younger patients and in settings outside the UK.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T20 1976-1988 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T21 1999-2020 Phenotype denotes myocardial infarction http://purl.obolibrary.org/obo/HP_0001658
T22 2026-2032 Phenotype denotes stroke http://purl.obolibrary.org/obo/HP_0001297