PMC:7115396 / 24168-24744
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T123 | 40-47 | Body_part | denotes | trachea | http://purl.org/sig/ont/fma/fma7394 |
| T124 | 49-54 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T125 | 56-63 | Body_part | denotes | kidneys | http://purl.org/sig/ont/fma/fma7203 |
| T126 | 69-74 | Body_part | denotes | bursa | http://purl.org/sig/ont/fma/fma9692 |
| T127 | 196-203 | Body_part | denotes | trachea | http://purl.org/sig/ont/fma/fma7394 |
| T128 | 258-263 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T129 | 300-307 | Body_part | denotes | Trachea | http://purl.org/sig/ont/fma/fma7394 |
| T130 | 350-354 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T131 | 359-364 | Body_part | denotes | bursa | http://purl.org/sig/ont/fma/fma9692 |
| T132 | 417-423 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
| T133 | 482-489 | Body_part | denotes | kidneys | http://purl.org/sig/ont/fma/fma7203 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T41 | 40-47 | Body_part | denotes | trachea | http://purl.obolibrary.org/obo/UBERON_0003126 |
| T42 | 196-203 | Body_part | denotes | trachea | http://purl.obolibrary.org/obo/UBERON_0003126 |
| T43 | 300-307 | Body_part | denotes | Trachea | http://purl.obolibrary.org/obo/UBERON_0003126 |
| T44 | 350-354 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T45 | 417-423 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
| T46 | 547-552 | Body_part | denotes | Scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T32 | 533-545 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T341 | 49-54 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T342 | 56-63 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidneys |
| T343 | 56-63 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidneys |
| T344 | 56-63 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidneys |
| T345 | 82-90 | http://purl.obolibrary.org/obo/NCBITaxon_9031 | denotes | chickens |
| T346 | 145-147 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T347 | 159-163 | http://purl.obolibrary.org/obo/CLO_0001757 | denotes | at 1 |
| T348 | 258-263 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T349 | 334-338 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 3, 5 |
| T350 | 344-345 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T351 | 350-354 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T352 | 350-354 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T353 | 417-423 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T354 | 417-423 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
| T355 | 417-423 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
| T356 | 482-489 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidneys |
| T357 | 482-489 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidneys |
| T358 | 482-489 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidneys |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T75 | 78-81 | Chemical | denotes | SPF | http://purl.obolibrary.org/obo/CHEBI_88542 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T35 | 223-231 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
| T36 | 223-231 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
| T37 | 223-231 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
| T38 | 223-231 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
| T39 | 533-545 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T167 | 0-175 | Sentence | denotes | Fig. 4 Histopathological changes in the trachea, lungs, kidneys, and bursa of SPF chickens infected with the recombinant rH120, rIBYZ, and rH120-S1/YZ strains at 1-day-of-age. |
| T168 | 176-237 | Sentence | denotes | Black arrows in the trachea indicate cilia and necrosis loss. |
| T169 | 238-299 | Sentence | denotes | Black arrows in the lungs indicate congestion and hemorrhage. |
| T170 | 300-465 | Sentence | denotes | Trachea samples were collected at 3, 5 dpi (A–D); lung and bursa samples were collected at 7, 10 dpi (E–H; M–P); and kidney samples were collected at 5, 7 dpi (I–L). |
| T171 | 466-546 | Sentence | denotes | Black arrows in kidneys indicate tubular dilation, congestion, and inflammation. |
| T172 | 547-576 | Sentence | denotes | Scale bar = 100 μm or 200 μm. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 348 | 78-99 | Disease | denotes | SPF chickens infected | MESH:D002644 |
| 349 | 223-236 | Disease | denotes | necrosis loss | MESH:D009336 |
| 350 | 288-298 | Disease | denotes | hemorrhage | MESH:D006470 |
| 351 | 533-545 | Disease | denotes | inflammation | MESH:D007249 |