PMC:7113610 / 13871-14554 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"434","span":{"begin":330,"end":338},"obj":"Gene"},{"id":"435","span":{"begin":290,"end":295},"obj":"Gene"},{"id":"436","span":{"begin":355,"end":367},"obj":"Gene"},{"id":"437","span":{"begin":0,"end":17},"obj":"Species"},{"id":"438","span":{"begin":43,"end":58},"obj":"Species"},{"id":"439","span":{"begin":63,"end":68},"obj":"Species"},{"id":"440","span":{"begin":70,"end":80},"obj":"Species"},{"id":"441","span":{"begin":82,"end":90},"obj":"Species"},{"id":"442","span":{"begin":95,"end":103},"obj":"Species"},{"id":"443","span":{"begin":469,"end":479},"obj":"Species"},{"id":"444","span":{"begin":607,"end":617},"obj":"Species"},{"id":"445","span":{"begin":622,"end":630},"obj":"Species"}],"attributes":[{"id":"A434","pred":"tao:has_database_id","subj":"434","obj":"Gene:43740571"},{"id":"A435","pred":"tao:has_database_id","subj":"435","obj":"Gene:43740568"},{"id":"A436","pred":"tao:has_database_id","subj":"436","obj":"Gene:43740575"},{"id":"A437","pred":"tao:has_database_id","subj":"437","obj":"Tax:694002"},{"id":"A438","pred":"tao:has_database_id","subj":"438","obj":"Tax:694002"},{"id":"A439","pred":"tao:has_database_id","subj":"439","obj":"Tax:9606"},{"id":"A440","pred":"tao:has_database_id","subj":"440","obj":"Tax:2697049"},{"id":"A441","pred":"tao:has_database_id","subj":"441","obj":"Tax:694009"},{"id":"A442","pred":"tao:has_database_id","subj":"442","obj":"Tax:1335626"},{"id":"A443","pred":"tao:has_database_id","subj":"443","obj":"Tax:2697049"},{"id":"A444","pred":"tao:has_database_id","subj":"444","obj":"Tax:2697049"},{"id":"A445","pred":"tao:has_database_id","subj":"445","obj":"Tax:694009"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Betacoronaviruses genome organization; The Betacoronavirus for human (SARS-CoV-2, SARS-CoV and MERS-CoV) genome comprises of the 5′-untranslated region (5′-UTR), open reading frame (orf) 1a/b (green box) encoding non-structural proteins (nsp) for replication, structural proteins including spike (blue box), envelop (maroon box), membrane (pink box), and nucleocapsid (cyan box) proteins, accessory proteins (light gray boxes) such as orf 3, 6, 7a, 7b, 8 and 9b in the SARS-CoV-2 genome, and the 3′-untranslated region (3′-UTR). The doted underlined in red are the protein which shows key variation between SARS-CoV-2 and SARS-CoV. The length of nsps and orfs are not drawn in scale."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T62","span":{"begin":18,"end":24},"obj":"Body_part"},{"id":"T63","span":{"begin":105,"end":111},"obj":"Body_part"},{"id":"T64","span":{"begin":228,"end":236},"obj":"Body_part"},{"id":"T65","span":{"begin":271,"end":279},"obj":"Body_part"},{"id":"T66","span":{"begin":379,"end":387},"obj":"Body_part"},{"id":"T67","span":{"begin":399,"end":407},"obj":"Body_part"},{"id":"T68","span":{"begin":480,"end":486},"obj":"Body_part"},{"id":"T69","span":{"begin":565,"end":572},"obj":"Body_part"}],"attributes":[{"id":"A62","pred":"fma_id","subj":"T62","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A63","pred":"fma_id","subj":"T63","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A64","pred":"fma_id","subj":"T64","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A65","pred":"fma_id","subj":"T65","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A66","pred":"fma_id","subj":"T66","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A67","pred":"fma_id","subj":"T67","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A68","pred":"fma_id","subj":"T68","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A69","pred":"fma_id","subj":"T69","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"Betacoronaviruses genome organization; The Betacoronavirus for human (SARS-CoV-2, SARS-CoV and MERS-CoV) genome comprises of the 5′-untranslated region (5′-UTR), open reading frame (orf) 1a/b (green box) encoding non-structural proteins (nsp) for replication, structural proteins including spike (blue box), envelop (maroon box), membrane (pink box), and nucleocapsid (cyan box) proteins, accessory proteins (light gray boxes) such as orf 3, 6, 7a, 7b, 8 and 9b in the SARS-CoV-2 genome, and the 3′-untranslated region (3′-UTR). The doted underlined in red are the protein which shows key variation between SARS-CoV-2 and SARS-CoV. The length of nsps and orfs are not drawn in scale."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T5","span":{"begin":677,"end":682},"obj":"Body_part"}],"attributes":[{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/UBERON_0002542"}],"text":"Betacoronaviruses genome organization; The Betacoronavirus for human (SARS-CoV-2, SARS-CoV and MERS-CoV) genome comprises of the 5′-untranslated region (5′-UTR), open reading frame (orf) 1a/b (green box) encoding non-structural proteins (nsp) for replication, structural proteins including spike (blue box), envelop (maroon box), membrane (pink box), and nucleocapsid (cyan box) proteins, accessory proteins (light gray boxes) such as orf 3, 6, 7a, 7b, 8 and 9b in the SARS-CoV-2 genome, and the 3′-untranslated region (3′-UTR). The doted underlined in red are the protein which shows key variation between SARS-CoV-2 and SARS-CoV. The length of nsps and orfs are not drawn in scale."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T143","span":{"begin":70,"end":78},"obj":"Disease"},{"id":"T144","span":{"begin":70,"end":74},"obj":"Disease"},{"id":"T145","span":{"begin":82,"end":90},"obj":"Disease"},{"id":"T146","span":{"begin":82,"end":86},"obj":"Disease"},{"id":"T147","span":{"begin":469,"end":477},"obj":"Disease"},{"id":"T148","span":{"begin":469,"end":473},"obj":"Disease"},{"id":"T149","span":{"begin":607,"end":615},"obj":"Disease"},{"id":"T150","span":{"begin":607,"end":611},"obj":"Disease"},{"id":"T151","span":{"begin":622,"end":630},"obj":"Disease"},{"id":"T152","span":{"begin":622,"end":626},"obj":"Disease"}],"attributes":[{"id":"A143","pred":"mondo_id","subj":"T143","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A144","pred":"mondo_id","subj":"T144","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A145","pred":"mondo_id","subj":"T145","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A146","pred":"mondo_id","subj":"T146","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A147","pred":"mondo_id","subj":"T147","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A148","pred":"mondo_id","subj":"T148","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A149","pred":"mondo_id","subj":"T149","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A150","pred":"mondo_id","subj":"T150","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A151","pred":"mondo_id","subj":"T151","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A152","pred":"mondo_id","subj":"T152","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"Betacoronaviruses genome organization; The Betacoronavirus for human (SARS-CoV-2, SARS-CoV and MERS-CoV) genome comprises of the 5′-untranslated region (5′-UTR), open reading frame (orf) 1a/b (green box) encoding non-structural proteins (nsp) for replication, structural proteins including spike (blue box), envelop (maroon box), membrane (pink box), and nucleocapsid (cyan box) proteins, accessory proteins (light gray boxes) such as orf 3, 6, 7a, 7b, 8 and 9b in the SARS-CoV-2 genome, and the 3′-untranslated region (3′-UTR). The doted underlined in red are the protein which shows key variation between SARS-CoV-2 and SARS-CoV. The length of nsps and orfs are not drawn in scale."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T141","span":{"begin":25,"end":37},"obj":"http://purl.obolibrary.org/obo/OBI_0000245"},{"id":"T142","span":{"begin":63,"end":68},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T143","span":{"begin":190,"end":191},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T144","span":{"begin":330,"end":338},"obj":"http://purl.obolibrary.org/obo/UBERON_0000158"},{"id":"T145","span":{"begin":439,"end":443},"obj":"http://purl.obolibrary.org/obo/CLO_0001313"}],"text":"Betacoronaviruses genome organization; The Betacoronavirus for human (SARS-CoV-2, SARS-CoV and MERS-CoV) genome comprises of the 5′-untranslated region (5′-UTR), open reading frame (orf) 1a/b (green box) encoding non-structural proteins (nsp) for replication, structural proteins including spike (blue box), envelop (maroon box), membrane (pink box), and nucleocapsid (cyan box) proteins, accessory proteins (light gray boxes) such as orf 3, 6, 7a, 7b, 8 and 9b in the SARS-CoV-2 genome, and the 3′-untranslated region (3′-UTR). The doted underlined in red are the protein which shows key variation between SARS-CoV-2 and SARS-CoV. The length of nsps and orfs are not drawn in scale."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T52","span":{"begin":228,"end":236},"obj":"Chemical"},{"id":"T53","span":{"begin":271,"end":279},"obj":"Chemical"},{"id":"T54","span":{"begin":379,"end":387},"obj":"Chemical"},{"id":"T55","span":{"begin":399,"end":407},"obj":"Chemical"},{"id":"T56","span":{"begin":565,"end":572},"obj":"Chemical"}],"attributes":[{"id":"A52","pred":"chebi_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A53","pred":"chebi_id","subj":"T53","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A54","pred":"chebi_id","subj":"T54","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A55","pred":"chebi_id","subj":"T55","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A56","pred":"chebi_id","subj":"T56","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"Betacoronaviruses genome organization; The Betacoronavirus for human (SARS-CoV-2, SARS-CoV and MERS-CoV) genome comprises of the 5′-untranslated region (5′-UTR), open reading frame (orf) 1a/b (green box) encoding non-structural proteins (nsp) for replication, structural proteins including spike (blue box), envelop (maroon box), membrane (pink box), and nucleocapsid (cyan box) proteins, accessory proteins (light gray boxes) such as orf 3, 6, 7a, 7b, 8 and 9b in the SARS-CoV-2 genome, and the 3′-untranslated region (3′-UTR). The doted underlined in red are the protein which shows key variation between SARS-CoV-2 and SARS-CoV. The length of nsps and orfs are not drawn in scale."}

{"project":"LitCovid-sentences","denotations":[{"id":"T109","span":{"begin":529,"end":631},"obj":"Sentence"},{"id":"T110","span":{"begin":632,"end":683},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Betacoronaviruses genome organization; The Betacoronavirus for human (SARS-CoV-2, SARS-CoV and MERS-CoV) genome comprises of the 5′-untranslated region (5′-UTR), open reading frame (orf) 1a/b (green box) encoding non-structural proteins (nsp) for replication, structural proteins including spike (blue box), envelop (maroon box), membrane (pink box), and nucleocapsid (cyan box) proteins, accessory proteins (light gray boxes) such as orf 3, 6, 7a, 7b, 8 and 9b in the SARS-CoV-2 genome, and the 3′-untranslated region (3′-UTR). The doted underlined in red are the protein which shows key variation between SARS-CoV-2 and SARS-CoV. The length of nsps and orfs are not drawn in scale."}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T398","span":{"begin":18,"end":24},"obj":"SO:0001026"},{"id":"T399","span":{"begin":43,"end":58},"obj":"SP_8;NCBITaxon:694002"},{"id":"T400","span":{"begin":63,"end":68},"obj":"SP_6;NCBITaxon:9606"},{"id":"T401","span":{"begin":70,"end":80},"obj":"SP_7"},{"id":"T402","span":{"begin":82,"end":90},"obj":"SP_10"},{"id":"T403","span":{"begin":95,"end":103},"obj":"SP_9"},{"id":"T404","span":{"begin":105,"end":111},"obj":"SO:0001026"},{"id":"T405","span":{"begin":132,"end":144},"obj":"GO:0006412;SO:0000203"},{"id":"T406","span":{"begin":145,"end":151},"obj":"SO:0000203"},{"id":"T407","span":{"begin":153,"end":159},"obj":"SO:0000204"},{"id":"T408","span":{"begin":162,"end":180},"obj":"SO:0000236"},{"id":"T409","span":{"begin":247,"end":258},"obj":"GO:0006260"},{"id":"T410","span":{"begin":330,"end":338},"obj":"GO:0016020"},{"id":"T411","span":{"begin":435,"end":440},"obj":"PR:P10394"},{"id":"T412","span":{"begin":469,"end":479},"obj":"SP_7"},{"id":"T413","span":{"begin":480,"end":486},"obj":"SO:0001026"},{"id":"T414","span":{"begin":496,"end":498},"obj":"SO:0000205"},{"id":"T415","span":{"begin":498,"end":499},"obj":"SO:0000204"},{"id":"T416","span":{"begin":499,"end":511},"obj":"GO:0006412;SO:0000203"},{"id":"T417","span":{"begin":512,"end":518},"obj":"SO:0000203"},{"id":"T418","span":{"begin":520,"end":522},"obj":"SO:0000205"},{"id":"T419","span":{"begin":522,"end":523},"obj":"SO:0000204"},{"id":"T420","span":{"begin":523,"end":526},"obj":"SO:0000203"},{"id":"T421","span":{"begin":607,"end":617},"obj":"SP_7"},{"id":"T422","span":{"begin":622,"end":630},"obj":"SP_10"}],"text":"Betacoronaviruses genome organization; The Betacoronavirus for human (SARS-CoV-2, SARS-CoV and MERS-CoV) genome comprises of the 5′-untranslated region (5′-UTR), open reading frame (orf) 1a/b (green box) encoding non-structural proteins (nsp) for replication, structural proteins including spike (blue box), envelop (maroon box), membrane (pink box), and nucleocapsid (cyan box) proteins, accessory proteins (light gray boxes) such as orf 3, 6, 7a, 7b, 8 and 9b in the SARS-CoV-2 genome, and the 3′-untranslated region (3′-UTR). The doted underlined in red are the protein which shows key variation between SARS-CoV-2 and SARS-CoV. The length of nsps and orfs are not drawn in scale."}