PMC:7111504 / 6608-7258
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 115 | 207-216 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 116 | 542-550 | Species | denotes | SARS CoV | Tax:694009 |
| 117 | 637-649 | Species | denotes | Homo sapiens | Tax:9606 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T81 | 53-61 | BV_9 | denotes | epitopes |
| T82 | 207-216 | SP_7 | denotes | 2019-nCoV |
| T83 | 542-550 | SP_10 | denotes | SARS CoV |
| T84 | 637-649 | SP_6;NCBITaxon:9606 | denotes | Homo sapiens |
| T26522 | 53-61 | BV_9 | denotes | epitopes |
| T51283 | 207-216 | SP_7 | denotes | 2019-nCoV |
| T83402 | 542-550 | SP_10 | denotes | SARS CoV |
| T38460 | 637-649 | SP_6;NCBITaxon:9606 | denotes | Homo sapiens |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T13 | 542-546 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T96 | 4-12 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T97 | 181-182 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T98 | 217-225 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T99 | 303-305 | http://purl.obolibrary.org/obo/CLO_0053799 | denotes | 45 |
| T100 | 310-312 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T101 | 313-321 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T102 | 412-420 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T103 | 482-483 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T104 | 490-492 | http://purl.obolibrary.org/obo/CLO_0001313 | denotes | 36 |
| T105 | 493-501 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T106 | 637-649 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | Homo sapiens |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T54 | 4-12 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T55 | 217-225 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T56 | 313-321 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T57 | 412-420 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T58 | 493-501 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T74 | 0-122 | Sentence | denotes | The peptides having an exact sequence alignment with epitopes in IEDB had normalized alignment scores ranging from 4 to 6. |
| T75 | 123-261 | Sentence | denotes | Taking the normalized alignment score of exact matches as a reference, we extracted 2019-nCoV peptides having score greater or equal to 4. |
| T76 | 262-400 | Sentence | denotes | As illustrated in Figure 1A, we observed 45 and 11 peptides having normalized alignment score ≥ 4 and ≥ 5 respectively ( Figure 1A inset). |
| T77 | 401-551 | Sentence | denotes | The target peptides were originated from 10 different sources ( Figure 1B) where a total 36 peptides were derived from strains associated to SARS CoV. |
| T78 | 552-650 | Sentence | denotes | Of interest, we also observed 7 hits having high sequence similarity to targets from Homo sapiens. |