PMC:7111504 / 4265-5874 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"84","span":{"begin":106,"end":111},"obj":"Gene"},{"id":"85","span":{"begin":942,"end":947},"obj":"Gene"},{"id":"86","span":{"begin":988,"end":993},"obj":"Gene"},{"id":"87","span":{"begin":1152,"end":1157},"obj":"Gene"},{"id":"88","span":{"begin":1214,"end":1222},"obj":"Gene"},{"id":"89","span":{"begin":1282,"end":1287},"obj":"Gene"},{"id":"90","span":{"begin":1328,"end":1333},"obj":"Gene"},{"id":"91","span":{"begin":1393,"end":1398},"obj":"Gene"},{"id":"92","span":{"begin":1453,"end":1460},"obj":"Gene"},{"id":"93","span":{"begin":1468,"end":1472},"obj":"Gene"},{"id":"94","span":{"begin":1527,"end":1535},"obj":"Gene"},{"id":"95","span":{"begin":1594,"end":1602},"obj":"Gene"},{"id":"96","span":{"begin":14,"end":23},"obj":"Species"},{"id":"97","span":{"begin":119,"end":160},"obj":"Disease"}],"attributes":[{"id":"A84","pred":"tao:has_database_id","subj":"84","obj":"Gene:3105"},{"id":"A85","pred":"tao:has_database_id","subj":"85","obj":"Gene:3106"},{"id":"A86","pred":"tao:has_database_id","subj":"86","obj":"Gene:3105"},{"id":"A87","pred":"tao:has_database_id","subj":"87","obj":"Gene:3105"},{"id":"A88","pred":"tao:has_database_id","subj":"88","obj":"Gene:3123"},{"id":"A89","pred":"tao:has_database_id","subj":"89","obj":"Gene:3105"},{"id":"A90","pred":"tao:has_database_id","subj":"90","obj":"Gene:3105"},{"id":"A91","pred":"tao:has_database_id","subj":"91","obj":"Gene:3105"},{"id":"A92","pred":"tao:has_database_id","subj":"92","obj":"Gene:3122"},{"id":"A93","pred":"tao:has_database_id","subj":"93","obj":"Gene:3123"},{"id":"A94","pred":"tao:has_database_id","subj":"94","obj":"Gene:3123"},{"id":"A95","pred":"tao:has_database_id","subj":"95","obj":"Gene:3123"},{"id":"A96","pred":"tao:has_database_id","subj":"96","obj":"Tax:2697049"},{"id":"A97","pred":"tao:has_database_id","subj":"97","obj":"MESH:C536108"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"IEDB.peptide 2019-nCoV.pattern Antigen.Name Allele.Name\nTLACFVLAAV TLACFVLAAV Membrane glycoprotein HLA-A *02:01\nAFFGMSRIGMEVTPSGTW AFFGMSRIGMEVTPSGTW N protein\nALNTPKDHI ALNTPKDHI Nucleoprotein HLA-A *02:01\nAQFAPSASAFFGMSR AQFAPSASAFFGMSR nucleocapsid protein HLA class II\nAQFAPSASAFFGMSRIGM AQFAPSASAFFGMSRIGM N protein\nGMSRIGMEV GMSRIGMEV Nucleoprotein HLA-A *02:01\nILLNKHIDA ILLNKHIDA Nucleoprotein HLA-A *02:01\nIRQGTDYKHWPQIAQFA IRQGTDYKHWPQIAQFA N protein\nKHWPQIAQFAPSASAFF KHWPQIAQFAPSASAFF N protein\nLALLLLDRL LALLLLDRL Nucleoprotein HLA-A *02:01\nLLLDRLNQL LLLDRLNQL Nucleoprotein HLA-A *02:01\nLLNKHIDAYKTFPPTEPK LLNKHIDAYKTFPPTEPK N protein\nLQLPQGTTL LQLPQGTTL Nucleoprotein HLA-A *02:01\nRRPQGLPNNTASWFT RRPQGLPNNTASWFT nucleocapsid protein HLA class I\nYKTFPPTEPKKDKKKK YKTFPPTEPKKDKKKK N protein\nILLNKHID ILLNKHID Nucleoprotein HLA-A *02:01\nMEVTPSGTWL MEVTPSGTWL nucleocapsid protein HLA-B *40:01\nALNTLVKQL ALNTLVKQL S protein HLA-A *02:01\nFIAGLIAIV FIAGLIAIV Spike glycoprotein precursor HLA-A2\nLITGRLQSL LITGRLQSL Spike glycoprotein precursor HLA-A2\nNLNESLIDL NLNESLIDL S protein HLA-A *02:01\nQALNTLVKQLSSNFGAI QALNTLVKQLSSNFGAI S protein HLA-DRB1 *04:01\nRLNEVAKNL RLNEVAKNL Spike glycoprotein precursor HLA-A *02:01\nVLNDILSRL VLNDILSRL S protein HLA-A *02:01\nVVFLHVTYV VVFLHVTYV Spike glycoprotein precursor HLA-A *02:01\nGAALQIPFAMQMAYRF GAALQIPFAMQMAYRF S protein HLA-DRA *01:01/DRB1 *07:01\nMAYRFNGIGVTQNVLY MAYRFNGIGVTQNVLY S protein HLA-DRB1 *04:01\nQLIRAAEIRASANLAATK QLIRAAEIRASANLAATK S protein HLA-DRB1 *04:01"}

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pred":"fma_id","subj":"T34","obj":"http://purl.org/sig/ont/fma/fma84795"},{"id":"A35","pred":"fma_id","subj":"T35","obj":"http://purl.org/sig/ont/fma/fma66595"},{"id":"A36","pred":"fma_id","subj":"T36","obj":"http://purl.org/sig/ont/fma/fma62925"},{"id":"A37","pred":"fma_id","subj":"T37","obj":"http://purl.org/sig/ont/fma/fma84795"},{"id":"A38","pred":"fma_id","subj":"T38","obj":"http://purl.org/sig/ont/fma/fma66595"},{"id":"A39","pred":"fma_id","subj":"T39","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A40","pred":"fma_id","subj":"T40","obj":"http://purl.org/sig/ont/fma/fma84795"},{"id":"A41","pred":"fma_id","subj":"T41","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A42","pred":"fma_id","subj":"T42","obj":"http://purl.org/sig/ont/fma/fma84795"},{"id":"A43","pred":"fma_id","subj":"T43","obj":"http://purl.org/sig/ont/fma/fma62925"},{"id":"A44","pred":"fma_id","subj":"T44","obj":"http://purl.org/sig/ont/fma/fma84795"},{"id":"A45","pred":"fma_id","subj":"T45","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A46","pred":"fma_id","subj":"T46","obj":"http://purl.org/sig/ont/fma/fma84795"},{"id":"A47","pred":"fma_id","subj":"T47","obj":"http://purl.org/sig/ont/fma/fma62925"},{"id":"A48","pred":"fma_id","subj":"T48","obj":"http://purl.org/sig/ont/fma/fma84795"},{"id":"A49","pred":"fma_id","subj":"T49","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A50","pred":"fma_id","subj":"T50","obj":"http://purl.org/sig/ont/fma/fma84795"},{"id":"A51","pred":"fma_id","subj":"T51","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A52","pred":"fma_id","subj":"T52","obj":"http://purl.org/sig/ont/fma/fma84795"},{"id":"A53","pred":"fma_id","subj":"T53","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A54","pred":"fma_id","subj":"T54","obj":"http://purl.org/sig/ont/fma/fma84795"}],"text":"IEDB.peptide 2019-nCoV.pattern Antigen.Name Allele.Name\nTLACFVLAAV TLACFVLAAV Membrane glycoprotein HLA-A *02:01\nAFFGMSRIGMEVTPSGTW AFFGMSRIGMEVTPSGTW N protein\nALNTPKDHI ALNTPKDHI Nucleoprotein HLA-A *02:01\nAQFAPSASAFFGMSR AQFAPSASAFFGMSR nucleocapsid protein HLA class II\nAQFAPSASAFFGMSRIGM AQFAPSASAFFGMSRIGM N protein\nGMSRIGMEV GMSRIGMEV Nucleoprotein HLA-A *02:01\nILLNKHIDA ILLNKHIDA Nucleoprotein HLA-A *02:01\nIRQGTDYKHWPQIAQFA IRQGTDYKHWPQIAQFA N protein\nKHWPQIAQFAPSASAFF KHWPQIAQFAPSASAFF N protein\nLALLLLDRL LALLLLDRL Nucleoprotein HLA-A *02:01\nLLLDRLNQL LLLDRLNQL Nucleoprotein HLA-A *02:01\nLLNKHIDAYKTFPPTEPK LLNKHIDAYKTFPPTEPK N protein\nLQLPQGTTL LQLPQGTTL Nucleoprotein HLA-A *02:01\nRRPQGLPNNTASWFT RRPQGLPNNTASWFT nucleocapsid protein HLA class I\nYKTFPPTEPKKDKKKK YKTFPPTEPKKDKKKK N protein\nILLNKHID ILLNKHID Nucleoprotein HLA-A *02:01\nMEVTPSGTWL MEVTPSGTWL nucleocapsid protein HLA-B *40:01\nALNTLVKQL ALNTLVKQL S protein HLA-A *02:01\nFIAGLIAIV FIAGLIAIV Spike glycoprotein precursor HLA-A2\nLITGRLQSL LITGRLQSL Spike glycoprotein precursor HLA-A2\nNLNESLIDL NLNESLIDL S protein HLA-A *02:01\nQALNTLVKQLSSNFGAI QALNTLVKQLSSNFGAI S protein HLA-DRB1 *04:01\nRLNEVAKNL RLNEVAKNL Spike glycoprotein precursor HLA-A *02:01\nVLNDILSRL VLNDILSRL S protein HLA-A *02:01\nVVFLHVTYV VVFLHVTYV Spike glycoprotein precursor HLA-A *02:01\nGAALQIPFAMQMAYRF GAALQIPFAMQMAYRF S protein HLA-DRA *01:01/DRB1 *07:01\nMAYRFNGIGVTQNVLY MAYRFNGIGVTQNVLY S protein HLA-DRB1 *04:01\nQLIRAAEIRASANLAATK QLIRAAEIRASANLAATK S protein HLA-DRB1 *04:01"}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T9","span":{"begin":1457,"end":1460},"obj":"Disease"}],"attributes":[{"id":"A9","pred":"mondo_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/MONDO_0019440"}],"text":"IEDB.peptide 2019-nCoV.pattern Antigen.Name Allele.Name\nTLACFVLAAV TLACFVLAAV Membrane glycoprotein HLA-A *02:01\nAFFGMSRIGMEVTPSGTW AFFGMSRIGMEVTPSGTW N protein\nALNTPKDHI ALNTPKDHI Nucleoprotein HLA-A *02:01\nAQFAPSASAFFGMSR AQFAPSASAFFGMSR nucleocapsid protein HLA class II\nAQFAPSASAFFGMSRIGM AQFAPSASAFFGMSRIGM N protein\nGMSRIGMEV GMSRIGMEV Nucleoprotein HLA-A *02:01\nILLNKHIDA ILLNKHIDA Nucleoprotein HLA-A *02:01\nIRQGTDYKHWPQIAQFA IRQGTDYKHWPQIAQFA N protein\nKHWPQIAQFAPSASAFF KHWPQIAQFAPSASAFF N protein\nLALLLLDRL LALLLLDRL Nucleoprotein HLA-A *02:01\nLLLDRLNQL LLLDRLNQL Nucleoprotein HLA-A *02:01\nLLNKHIDAYKTFPPTEPK LLNKHIDAYKTFPPTEPK N protein\nLQLPQGTTL LQLPQGTTL Nucleoprotein HLA-A *02:01\nRRPQGLPNNTASWFT RRPQGLPNNTASWFT nucleocapsid protein HLA class I\nYKTFPPTEPKKDKKKK YKTFPPTEPKKDKKKK N protein\nILLNKHID ILLNKHID Nucleoprotein HLA-A *02:01\nMEVTPSGTWL MEVTPSGTWL nucleocapsid protein HLA-B *40:01\nALNTLVKQL ALNTLVKQL S protein HLA-A *02:01\nFIAGLIAIV FIAGLIAIV Spike glycoprotein precursor HLA-A2\nLITGRLQSL LITGRLQSL Spike glycoprotein precursor HLA-A2\nNLNESLIDL NLNESLIDL S protein HLA-A *02:01\nQALNTLVKQLSSNFGAI QALNTLVKQLSSNFGAI S protein HLA-DRB1 *04:01\nRLNEVAKNL RLNEVAKNL Spike glycoprotein precursor HLA-A *02:01\nVLNDILSRL VLNDILSRL S protein HLA-A *02:01\nVVFLHVTYV VVFLHVTYV Spike glycoprotein precursor HLA-A *02:01\nGAALQIPFAMQMAYRF GAALQIPFAMQMAYRF S protein HLA-DRA *01:01/DRB1 *07:01\nMAYRFNGIGVTQNVLY MAYRFNGIGVTQNVLY S protein HLA-DRB1 *04:01\nQLIRAAEIRASANLAATK QLIRAAEIRASANLAATK S protein HLA-DRB1 *04:01"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T65","span":{"begin":83,"end":91},"obj":"http://purl.obolibrary.org/obo/UBERON_0000158"},{"id":"T66","span":{"begin":110,"end":111},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T67","span":{"begin":210,"end":211},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T68","span":{"begin":379,"end":380},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T69","span":{"begin":429,"end":430},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T70","span":{"begin":575,"end":576},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T71","span":{"begin":625,"end":626},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T72","span":{"begin":725,"end":726},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T73","span":{"begin":887,"end":888},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T74","span":{"begin":946,"end":947},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T75","span":{"begin":992,"end":993},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T76","span":{"begin":1057,"end":1059},"obj":"http://purl.obolibrary.org/obo/CLO_0001562"},{"id":"T77","span":{"begin":1116,"end":1118},"obj":"http://purl.obolibrary.org/obo/CLO_0001562"},{"id":"T78","span":{"begin":1156,"end":1157},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T79","span":{"begin":1286,"end":1287},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T80","span":{"begin":1332,"end":1333},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T81","span":{"begin":1397,"end":1398},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"IEDB.peptide 2019-nCoV.pattern Antigen.Name Allele.Name\nTLACFVLAAV TLACFVLAAV Membrane glycoprotein HLA-A *02:01\nAFFGMSRIGMEVTPSGTW AFFGMSRIGMEVTPSGTW N protein\nALNTPKDHI ALNTPKDHI Nucleoprotein HLA-A *02:01\nAQFAPSASAFFGMSR AQFAPSASAFFGMSR nucleocapsid protein HLA class II\nAQFAPSASAFFGMSRIGM AQFAPSASAFFGMSRIGM N protein\nGMSRIGMEV GMSRIGMEV Nucleoprotein HLA-A *02:01\nILLNKHIDA ILLNKHIDA Nucleoprotein HLA-A *02:01\nIRQGTDYKHWPQIAQFA IRQGTDYKHWPQIAQFA N protein\nKHWPQIAQFAPSASAFF KHWPQIAQFAPSASAFF N protein\nLALLLLDRL LALLLLDRL Nucleoprotein HLA-A *02:01\nLLLDRLNQL LLLDRLNQL Nucleoprotein HLA-A *02:01\nLLNKHIDAYKTFPPTEPK LLNKHIDAYKTFPPTEPK N protein\nLQLPQGTTL LQLPQGTTL Nucleoprotein HLA-A *02:01\nRRPQGLPNNTASWFT RRPQGLPNNTASWFT nucleocapsid protein HLA class I\nYKTFPPTEPKKDKKKK YKTFPPTEPKKDKKKK N protein\nILLNKHID ILLNKHID Nucleoprotein HLA-A *02:01\nMEVTPSGTWL MEVTPSGTWL nucleocapsid protein HLA-B *40:01\nALNTLVKQL ALNTLVKQL S protein HLA-A *02:01\nFIAGLIAIV FIAGLIAIV Spike glycoprotein precursor HLA-A2\nLITGRLQSL LITGRLQSL Spike glycoprotein precursor HLA-A2\nNLNESLIDL NLNESLIDL S protein HLA-A *02:01\nQALNTLVKQLSSNFGAI QALNTLVKQLSSNFGAI S protein HLA-DRB1 *04:01\nRLNEVAKNL RLNEVAKNL Spike glycoprotein precursor HLA-A *02:01\nVLNDILSRL VLNDILSRL S protein HLA-A *02:01\nVVFLHVTYV VVFLHVTYV Spike glycoprotein precursor HLA-A *02:01\nGAALQIPFAMQMAYRF GAALQIPFAMQMAYRF S protein HLA-DRA *01:01/DRB1 *07:01\nMAYRFNGIGVTQNVLY MAYRFNGIGVTQNVLY S protein HLA-DRB1 *04:01\nQLIRAAEIRASANLAATK QLIRAAEIRASANLAATK S protein HLA-DRB1 *04:01"}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T25","span":{"begin":92,"end":104},"obj":"Chemical"},{"id":"T26","span":{"begin":161,"end":168},"obj":"Chemical"},{"id":"T27","span":{"begin":266,"end":273},"obj":"Chemical"},{"id":"T28","span":{"begin":285,"end":287},"obj":"Chemical"},{"id":"T29","span":{"begin":330,"end":337},"obj":"Chemical"},{"id":"T30","span":{"begin":478,"end":485},"obj":"Chemical"},{"id":"T31","span":{"begin":526,"end":533},"obj":"Chemical"},{"id":"T32","span":{"begin":676,"end":683},"obj":"Chemical"},{"id":"T33","span":{"begin":781,"end":788},"obj":"Chemical"},{"id":"T34","span":{"begin":840,"end":847},"obj":"Chemical"},{"id":"T35","span":{"begin":933,"end":940},"obj":"Chemical"},{"id":"T36","span":{"begin":979,"end":986},"obj":"Chemical"},{"id":"T37","span":{"begin":1029,"end":1041},"obj":"Chemical"},{"id":"T38","span":{"begin":1088,"end":1100},"obj":"Chemical"},{"id":"T39","span":{"begin":1143,"end":1150},"obj":"Chemical"},{"id":"T40","span":{"begin":1205,"end":1212},"obj":"Chemical"},{"id":"T41","span":{"begin":1258,"end":1270},"obj":"Chemical"},{"id":"T42","span":{"begin":1319,"end":1326},"obj":"Chemical"},{"id":"T43","span":{"begin":1369,"end":1381},"obj":"Chemical"},{"id":"T44","span":{"begin":1444,"end":1451},"obj":"Chemical"},{"id":"T45","span":{"begin":1518,"end":1525},"obj":"Chemical"},{"id":"T46","span":{"begin":1585,"end":1592},"obj":"Chemical"}],"attributes":[{"id":"A25","pred":"chebi_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"},{"id":"A26","pred":"chebi_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A27","pred":"chebi_id","subj":"T27","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A28","pred":"chebi_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/CHEBI_74067"},{"id":"A29","pred":"chebi_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A30","pred":"chebi_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A31","pred":"chebi_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A32","pred":"chebi_id","subj":"T32","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A33","pred":"chebi_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A34","pred":"chebi_id","subj":"T34","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A35","pred":"chebi_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A36","pred":"chebi_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A37","pred":"chebi_id","subj":"T37","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"},{"id":"A38","pred":"chebi_id","subj":"T38","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"},{"id":"A39","pred":"chebi_id","subj":"T39","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A40","pred":"chebi_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A41","pred":"chebi_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"},{"id":"A42","pred":"chebi_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A43","pred":"chebi_id","subj":"T43","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"},{"id":"A44","pred":"chebi_id","subj":"T44","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A45","pred":"chebi_id","subj":"T45","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A46","pred":"chebi_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"IEDB.peptide 2019-nCoV.pattern Antigen.Name Allele.Name\nTLACFVLAAV TLACFVLAAV Membrane glycoprotein HLA-A *02:01\nAFFGMSRIGMEVTPSGTW AFFGMSRIGMEVTPSGTW N protein\nALNTPKDHI ALNTPKDHI Nucleoprotein HLA-A *02:01\nAQFAPSASAFFGMSR AQFAPSASAFFGMSR nucleocapsid protein HLA class II\nAQFAPSASAFFGMSRIGM AQFAPSASAFFGMSRIGM N protein\nGMSRIGMEV GMSRIGMEV Nucleoprotein HLA-A *02:01\nILLNKHIDA ILLNKHIDA Nucleoprotein HLA-A *02:01\nIRQGTDYKHWPQIAQFA IRQGTDYKHWPQIAQFA N protein\nKHWPQIAQFAPSASAFF KHWPQIAQFAPSASAFF N protein\nLALLLLDRL LALLLLDRL Nucleoprotein HLA-A *02:01\nLLLDRLNQL LLLDRLNQL Nucleoprotein HLA-A *02:01\nLLNKHIDAYKTFPPTEPK LLNKHIDAYKTFPPTEPK N protein\nLQLPQGTTL LQLPQGTTL Nucleoprotein HLA-A *02:01\nRRPQGLPNNTASWFT RRPQGLPNNTASWFT nucleocapsid protein HLA class I\nYKTFPPTEPKKDKKKK YKTFPPTEPKKDKKKK N protein\nILLNKHID ILLNKHID Nucleoprotein HLA-A *02:01\nMEVTPSGTWL MEVTPSGTWL nucleocapsid protein HLA-B *40:01\nALNTLVKQL ALNTLVKQL S protein HLA-A *02:01\nFIAGLIAIV FIAGLIAIV Spike glycoprotein precursor HLA-A2\nLITGRLQSL LITGRLQSL Spike glycoprotein precursor HLA-A2\nNLNESLIDL NLNESLIDL S protein HLA-A *02:01\nQALNTLVKQLSSNFGAI QALNTLVKQLSSNFGAI S protein HLA-DRB1 *04:01\nRLNEVAKNL RLNEVAKNL Spike glycoprotein precursor HLA-A *02:01\nVLNDILSRL VLNDILSRL S protein HLA-A *02:01\nVVFLHVTYV VVFLHVTYV Spike glycoprotein precursor HLA-A *02:01\nGAALQIPFAMQMAYRF GAALQIPFAMQMAYRF S protein HLA-DRA *01:01/DRB1 *07:01\nMAYRFNGIGVTQNVLY MAYRFNGIGVTQNVLY S protein HLA-DRB1 *04:01\nQLIRAAEIRASANLAATK QLIRAAEIRASANLAATK S protein HLA-DRB1 *04:01"}

{"project":"LitCovid-sentences","denotations":[{"id":"T34","span":{"begin":0,"end":58},"obj":"Sentence"},{"id":"T35","span":{"begin":59,"end":118},"obj":"Sentence"},{"id":"T36","span":{"begin":119,"end":168},"obj":"Sentence"},{"id":"T37","span":{"begin":169,"end":218},"obj":"Sentence"},{"id":"T38","span":{"begin":219,"end":287},"obj":"Sentence"},{"id":"T39","span":{"begin":288,"end":337},"obj":"Sentence"},{"id":"T40","span":{"begin":338,"end":387},"obj":"Sentence"},{"id":"T41","span":{"begin":388,"end":437},"obj":"Sentence"},{"id":"T42","span":{"begin":438,"end":485},"obj":"Sentence"},{"id":"T43","span":{"begin":486,"end":533},"obj":"Sentence"},{"id":"T44","span":{"begin":534,"end":583},"obj":"Sentence"},{"id":"T45","span":{"begin":584,"end":633},"obj":"Sentence"},{"id":"T46","span":{"begin":634,"end":683},"obj":"Sentence"},{"id":"T47","span":{"begin":684,"end":733},"obj":"Sentence"},{"id":"T48","span":{"begin":734,"end":801},"obj":"Sentence"},{"id":"T49","span":{"begin":802,"end":847},"obj":"Sentence"},{"id":"T50","span":{"begin":848,"end":895},"obj":"Sentence"},{"id":"T51","span":{"begin":896,"end":954},"obj":"Sentence"},{"id":"T52","span":{"begin":955,"end":1000},"obj":"Sentence"},{"id":"T53","span":{"begin":1001,"end":1059},"obj":"Sentence"},{"id":"T54","span":{"begin":1060,"end":1118},"obj":"Sentence"},{"id":"T55","span":{"begin":1119,"end":1164},"obj":"Sentence"},{"id":"T56","span":{"begin":1165,"end":1229},"obj":"Sentence"},{"id":"T57","span":{"begin":1230,"end":1294},"obj":"Sentence"},{"id":"T58","span":{"begin":1295,"end":1340},"obj":"Sentence"},{"id":"T59","span":{"begin":1341,"end":1405},"obj":"Sentence"},{"id":"T60","span":{"begin":1406,"end":1479},"obj":"Sentence"},{"id":"T61","span":{"begin":1480,"end":1542},"obj":"Sentence"},{"id":"T62","span":{"begin":1543,"end":1609},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"IEDB.peptide 2019-nCoV.pattern Antigen.Name Allele.Name\nTLACFVLAAV TLACFVLAAV Membrane glycoprotein HLA-A *02:01\nAFFGMSRIGMEVTPSGTW AFFGMSRIGMEVTPSGTW N protein\nALNTPKDHI ALNTPKDHI Nucleoprotein HLA-A *02:01\nAQFAPSASAFFGMSR AQFAPSASAFFGMSR nucleocapsid protein HLA class II\nAQFAPSASAFFGMSRIGM AQFAPSASAFFGMSRIGM N protein\nGMSRIGMEV GMSRIGMEV Nucleoprotein HLA-A *02:01\nILLNKHIDA ILLNKHIDA Nucleoprotein HLA-A *02:01\nIRQGTDYKHWPQIAQFA IRQGTDYKHWPQIAQFA N protein\nKHWPQIAQFAPSASAFF KHWPQIAQFAPSASAFF N protein\nLALLLLDRL LALLLLDRL Nucleoprotein HLA-A *02:01\nLLLDRLNQL LLLDRLNQL Nucleoprotein HLA-A *02:01\nLLNKHIDAYKTFPPTEPK LLNKHIDAYKTFPPTEPK N protein\nLQLPQGTTL LQLPQGTTL Nucleoprotein HLA-A *02:01\nRRPQGLPNNTASWFT RRPQGLPNNTASWFT nucleocapsid protein HLA class I\nYKTFPPTEPKKDKKKK YKTFPPTEPKKDKKKK N protein\nILLNKHID ILLNKHID Nucleoprotein HLA-A *02:01\nMEVTPSGTWL MEVTPSGTWL nucleocapsid protein HLA-B *40:01\nALNTLVKQL ALNTLVKQL S protein HLA-A *02:01\nFIAGLIAIV FIAGLIAIV Spike glycoprotein precursor HLA-A2\nLITGRLQSL LITGRLQSL Spike glycoprotein precursor HLA-A2\nNLNESLIDL NLNESLIDL S protein HLA-A *02:01\nQALNTLVKQLSSNFGAI QALNTLVKQLSSNFGAI S protein HLA-DRB1 *04:01\nRLNEVAKNL RLNEVAKNL Spike glycoprotein precursor HLA-A *02:01\nVLNDILSRL VLNDILSRL S protein HLA-A *02:01\nVVFLHVTYV VVFLHVTYV Spike glycoprotein precursor HLA-A *02:01\nGAALQIPFAMQMAYRF GAALQIPFAMQMAYRF S protein HLA-DRA *01:01/DRB1 *07:01\nMAYRFNGIGVTQNVLY MAYRFNGIGVTQNVLY S protein HLA-DRB1 *04:01\nQLIRAAEIRASANLAATK QLIRAAEIRASANLAATK S protein HLA-DRB1 *04:01"}