> top > docs > PMC:7111504 > spans > 4265-5874 > annotations

PMC:7111504 / 4265-5874 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
84 106-111 Gene denotes HLA-A Gene:3105
85 942-947 Gene denotes HLA-B Gene:3106
86 988-993 Gene denotes HLA-A Gene:3105
87 1152-1157 Gene denotes HLA-A Gene:3105
88 1214-1222 Gene denotes HLA-DRB1 Gene:3123
89 1282-1287 Gene denotes HLA-A Gene:3105
90 1328-1333 Gene denotes HLA-A Gene:3105
91 1393-1398 Gene denotes HLA-A Gene:3105
92 1453-1460 Gene denotes HLA-DRA Gene:3122
93 1468-1472 Gene denotes DRB1 Gene:3123
94 1527-1535 Gene denotes HLA-DRB1 Gene:3123
95 1594-1602 Gene denotes HLA-DRB1 Gene:3123
96 14-23 Species denotes 2019-nCoV Tax:2697049
97 119-160 Disease denotes AFFGMSRIGMEVTPSGTW AFFGMSRIGMEVTPSGTW N MESH:C536108

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T10 92-104 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T11 106-109 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T12 161-168 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T13 206-209 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T14 266-273 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T15 275-278 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T16 330-337 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T17 375-378 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T18 425-428 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T19 478-485 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T20 526-533 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T21 571-574 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T22 621-624 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T23 676-683 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T24 721-724 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T25 781-788 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T26 790-793 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T27 840-847 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T28 883-886 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T29 933-940 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T30 942-945 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T31 979-986 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T32 988-991 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T33 1029-1041 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T34 1053-1056 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T35 1057-1059 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T36 1088-1100 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T37 1112-1115 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T38 1116-1118 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T39 1143-1150 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T40 1152-1155 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T41 1205-1212 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T42 1214-1217 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T43 1258-1270 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T44 1282-1285 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T45 1319-1326 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T46 1328-1331 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T47 1369-1381 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T48 1393-1396 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T49 1444-1451 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T50 1453-1456 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T51 1518-1525 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T52 1527-1530 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T53 1585-1592 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T54 1594-1597 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T9 1457-1460 Disease denotes DRA http://purl.obolibrary.org/obo/MONDO_0019440

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T65 83-91 http://purl.obolibrary.org/obo/UBERON_0000158 denotes Membrane
T66 110-111 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T67 210-211 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T68 379-380 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T69 429-430 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T70 575-576 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T71 625-626 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T72 725-726 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T73 887-888 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T74 946-947 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T75 992-993 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T76 1057-1059 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T77 1116-1118 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T78 1156-1157 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T79 1286-1287 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T80 1332-1333 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T81 1397-1398 http://purl.obolibrary.org/obo/CLO_0001020 denotes A

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T25 92-104 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T26 161-168 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T27 266-273 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T28 285-287 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T29 330-337 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T30 478-485 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T31 526-533 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T32 676-683 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T33 781-788 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T34 840-847 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T35 933-940 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T36 979-986 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T37 1029-1041 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T38 1088-1100 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T39 1143-1150 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T40 1205-1212 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T41 1258-1270 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T42 1319-1326 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T43 1369-1381 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T44 1444-1451 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T45 1518-1525 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T46 1585-1592 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T34 0-58 Sentence denotes IEDB.peptide 2019-nCoV.pattern Antigen.Name Allele.Name
T35 59-118 Sentence denotes TLACFVLAAV TLACFVLAAV Membrane glycoprotein HLA-A *02:01
T36 119-168 Sentence denotes AFFGMSRIGMEVTPSGTW AFFGMSRIGMEVTPSGTW N protein
T37 169-218 Sentence denotes ALNTPKDHI ALNTPKDHI Nucleoprotein HLA-A *02:01
T38 219-287 Sentence denotes AQFAPSASAFFGMSR AQFAPSASAFFGMSR nucleocapsid protein HLA class II
T39 288-337 Sentence denotes AQFAPSASAFFGMSRIGM AQFAPSASAFFGMSRIGM N protein
T40 338-387 Sentence denotes GMSRIGMEV GMSRIGMEV Nucleoprotein HLA-A *02:01
T41 388-437 Sentence denotes ILLNKHIDA ILLNKHIDA Nucleoprotein HLA-A *02:01
T42 438-485 Sentence denotes IRQGTDYKHWPQIAQFA IRQGTDYKHWPQIAQFA N protein
T43 486-533 Sentence denotes KHWPQIAQFAPSASAFF KHWPQIAQFAPSASAFF N protein
T44 534-583 Sentence denotes LALLLLDRL LALLLLDRL Nucleoprotein HLA-A *02:01
T45 584-633 Sentence denotes LLLDRLNQL LLLDRLNQL Nucleoprotein HLA-A *02:01
T46 634-683 Sentence denotes LLNKHIDAYKTFPPTEPK LLNKHIDAYKTFPPTEPK N protein
T47 684-733 Sentence denotes LQLPQGTTL LQLPQGTTL Nucleoprotein HLA-A *02:01
T48 734-801 Sentence denotes RRPQGLPNNTASWFT RRPQGLPNNTASWFT nucleocapsid protein HLA class I
T49 802-847 Sentence denotes YKTFPPTEPKKDKKKK YKTFPPTEPKKDKKKK N protein
T50 848-895 Sentence denotes ILLNKHID ILLNKHID Nucleoprotein HLA-A *02:01
T51 896-954 Sentence denotes MEVTPSGTWL MEVTPSGTWL nucleocapsid protein HLA-B *40:01
T52 955-1000 Sentence denotes ALNTLVKQL ALNTLVKQL S protein HLA-A *02:01
T53 1001-1059 Sentence denotes FIAGLIAIV FIAGLIAIV Spike glycoprotein precursor HLA-A2
T54 1060-1118 Sentence denotes LITGRLQSL LITGRLQSL Spike glycoprotein precursor HLA-A2
T55 1119-1164 Sentence denotes NLNESLIDL NLNESLIDL S protein HLA-A *02:01
T56 1165-1229 Sentence denotes QALNTLVKQLSSNFGAI QALNTLVKQLSSNFGAI S protein HLA-DRB1 *04:01
T57 1230-1294 Sentence denotes RLNEVAKNL RLNEVAKNL Spike glycoprotein precursor HLA-A *02:01
T58 1295-1340 Sentence denotes VLNDILSRL VLNDILSRL S protein HLA-A *02:01
T59 1341-1405 Sentence denotes VVFLHVTYV VVFLHVTYV Spike glycoprotein precursor HLA-A *02:01
T60 1406-1479 Sentence denotes GAALQIPFAMQMAYRF GAALQIPFAMQMAYRF S protein HLA-DRA *01:01/DRB1 *07:01
T61 1480-1542 Sentence denotes MAYRFNGIGVTQNVLY MAYRFNGIGVTQNVLY S protein HLA-DRB1 *04:01
T62 1543-1609 Sentence denotes QLIRAAEIRASANLAATK QLIRAAEIRASANLAATK S protein HLA-DRB1 *04:01