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PMC:7111504 / 21746-22863 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
320 31-40 Species denotes 2019-nCoV Tax:2697049
321 98-106 CellLine denotes MN908947 CVCL:U508
323 184-193 Species denotes 2019-nCoV Tax:2697049
328 312-316 Species denotes nCoV Tax:2697049
329 362-370 Species denotes SARS CoV Tax:694009
330 395-399 Species denotes nCoV Tax:2697049
331 445-453 Species denotes SARS CoV Tax:694009
333 473-477 Species denotes nCoV Tax:2697049
338 666-670 Species denotes nCoV Tax:2697049
339 768-772 Species denotes nCoV Tax:2697049
340 699-708 Chemical denotes NetMHCpan
341 801-810 Chemical denotes NetMHCpan
346 855-859 Species denotes nCoV Tax:2697049
347 956-960 Species denotes nCoV Tax:2697049
348 888-897 Chemical denotes NetMHCpan
349 989-998 Chemical denotes NetMHCpan

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T222 31-40 SP_7 denotes 2019-nCoV
T223 41-59 SO:0000236 denotes open reading frame
T224 184-193 SP_7 denotes 2019-nCoV
T225 350-361 CHEBI:60816;CHEBI:60816 denotes immunogenic
T226 362-370 SP_10 denotes SARS CoV
T227 433-444 CHEBI:60816;CHEBI:60816 denotes immunogenic
T228 445-453 SP_10 denotes SARS CoV
T229 522-533 CHEBI:60816;CHEBI:60816 denotes immunogenic
T230 606-617 CHEBI:60816;CHEBI:60816 denotes immunogenic
T231 675-686 CHEBI:60816;CHEBI:60816 denotes immunogenic
T232 777-788 CHEBI:60816;CHEBI:60816 denotes immunogenic
T233 864-875 CHEBI:60816;CHEBI:60816 denotes immunogenic
T234 965-976 CHEBI:60816;CHEBI:60816 denotes immunogenic
T58035 31-40 SP_7 denotes 2019-nCoV
T75411 41-59 SO:0000236 denotes open reading frame
T96821 184-193 SP_7 denotes 2019-nCoV
T87728 350-361 CHEBI:60816;CHEBI:60816 denotes immunogenic
T92255 362-370 SP_10 denotes SARS CoV
T69618 433-444 CHEBI:60816;CHEBI:60816 denotes immunogenic
T13352 445-453 SP_10 denotes SARS CoV
T64310 522-533 CHEBI:60816;CHEBI:60816 denotes immunogenic
T56881 606-617 CHEBI:60816;CHEBI:60816 denotes immunogenic
T70997 675-686 CHEBI:60816;CHEBI:60816 denotes immunogenic
T65589 777-788 CHEBI:60816;CHEBI:60816 denotes immunogenic
T52528 864-875 CHEBI:60816;CHEBI:60816 denotes immunogenic
T46179 965-976 CHEBI:60816;CHEBI:60816 denotes immunogenic

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T25 362-366 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T26 445-449 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T265 317-325 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T266 400-408 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T267 454-462 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T268 478-486 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T269 562-570 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T270 623-631 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T271 687-695 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T272 789-797 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T273 876-884 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T274 977-985 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T150 317-325 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T151 400-408 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T152 454-462 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T153 478-486 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T154 562-570 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T155 623-631 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T156 687-695 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T157 789-797 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T158 876-884 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T159 977-985 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T160 1106-1108 Chemical denotes CC http://purl.obolibrary.org/obo/CHEBI_28940

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T230 0-17 Sentence denotes Data availability
T231 19-30 Sentence denotes Source data
T232 31-110 Sentence denotes 2019-nCoV open reading frame sequences were downloaded from NCBI ( MN908947.3).
T233 112-127 Sentence denotes Underlying data
T234 128-135 Sentence denotes Zenodo:
T235 136-249 Sentence denotes In silico identification of vaccine targets for 2019-nCoV (Data tables). http://doi.org/10.5281/zenodo.3676886 10
T236 250-463 Sentence denotes This project contains the following underlying data: – Table1 nCoV peptides having exact match with immunogenic SARS CoV peptides.xlsx (Table of nCoV peptides having exact match with immunogenic SARS CoV peptides)
T237 464-632 Sentence denotes – Table2 nCoV peptides with high sequence similarity with immunogenic IEDB peptides.csv (Table of peptides with high sequence similarity with immunogenic IEDB peptides)
T238 633-821 Sentence denotes – Table3 de novo search on 9-mer nCoV for immunogenic peptides by NetMHCpan and iPred.csv (Table of results of de novo search on 9-mer nCoV for immunogenic peptides by NetMHCpan and iPred)
T239 822-1007 Sentence denotes – Table4 de novo search on 9-mer nCoV for immunogenic peptides by NetMHCpan and PWM.xlsx (Table of results of de novo search on 9-mer nCoV for immunogenic peptides by NetMHCpan and PWM)
T240 1008-1117 Sentence denotes Data are available under the terms of the Creative Commons Attribution 4.0 International license (CC-BY 4.0).