PMC:7111504 / 17236-18123
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 268 | 32-49 | Species | denotes | novel coronavirus | Tax:2697049 |
| 269 | 241-250 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 270 | 265-273 | Species | denotes | SARS CoV | Tax:694009 |
| 271 | 405-414 | Species | denotes | 2019-nCoV | Tax:2697049 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T186 | 38-49 | NCBITaxon:11118 | denotes | coronavirus |
| T187 | 241-250 | SP_7 | denotes | 2019-nCoV |
| T188 | 265-273 | SP_10 | denotes | SARS CoV |
| T189 | 274-285 | CHEBI:60816;CHEBI:60816 | denotes | immunogenic |
| T190 | 368-379 | CHEBI:60816;CHEBI:60816 | denotes | immunogenic |
| T191 | 396-400 | SP_10 | denotes | SARS |
| T192 | 405-414 | SP_7 | denotes | 2019-nCoV |
| T88699 | 38-49 | NCBITaxon:11118 | denotes | coronavirus |
| T36180 | 241-250 | SP_7 | denotes | 2019-nCoV |
| T25512 | 265-273 | SP_10 | denotes | SARS CoV |
| T97898 | 274-285 | CHEBI:60816;CHEBI:60816 | denotes | immunogenic |
| T74245 | 368-379 | CHEBI:60816;CHEBI:60816 | denotes | immunogenic |
| T63591 | 396-400 | SP_10 | denotes | SARS |
| T88310 | 405-414 | SP_7 | denotes | 2019-nCoV |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T97 | 548-552 | Body_part | denotes | hand | http://purl.org/sig/ont/fma/fma9712 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T2 | 548-552 | Body_part | denotes | hand | http://purl.obolibrary.org/obo/UBERON_0002398 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T21 | 265-269 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T22 | 396-400 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T219 | 5-6 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T220 | 202-203 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T221 | 286-294 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T222 | 380-387 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptide |
| T223 | 460-461 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T224 | 682-683 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T120 | 286-294 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T121 | 380-387 | Chemical | denotes | peptide | http://purl.obolibrary.org/obo/CHEBI_16670 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T190 | 0-140 | Sentence | denotes | With a rising global concern of novel coronavirus outbreak, numerous research groups have started to investigate and publish their findings. |
| T191 | 141-297 | Sentence | denotes | At the time of preparing this manuscript, we became aware of a similar study conducted in comparing 2019-nCoV proteome with SARS CoV immunogenic peptides 9. |
| T192 | 298-534 | Sentence | denotes | Our in silico approach takes the search beyond presenting only common immunogenic peptide between SARS and 2019-nCoV and provides the experimental community with a more comprehensive list including de novo and cross reactive candidates. |
| T193 | 535-736 | Sentence | denotes | On the other hand, considering the fact that two studies have been accomplished independently with distinct approaches, this serves to demonstrate a high level of confidence in reproducing the results. |
| T194 | 737-887 | Sentence | denotes | Reproducibility of computational prediction is always of high importance and becomes even more significant under urgent scenarios as of this outbreak. |