PMC:7111504 / 11215-12084
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 158 | 10-19 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 159 | 80-89 | Chemical | denotes | NetMHCpan |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T132 | 10-19 | SP_7 | denotes | 2019-nCoV |
| T133 | 69-76 | SO:0001023 | denotes | alleles |
| T134 | 131-138 | SO:0001023 | denotes | alleles |
| T135 | 143-157 | BV_15 | denotes | immunogenicity |
| T136 | 194-201 | SO:0001023 | denotes | alleles |
| T137 | 274-280 | SO:0001023 | denotes | allele |
| T69709 | 10-19 | SP_7 | denotes | 2019-nCoV |
| T97652 | 69-76 | SO:0001023 | denotes | alleles |
| T30189 | 131-138 | SO:0001023 | denotes | alleles |
| T17570 | 143-157 | BV_15 | denotes | immunogenicity |
| T56623 | 194-201 | SO:0001023 | denotes | alleles |
| T32084 | 274-280 | SO:0001023 | denotes | allele |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T67 | 65-68 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
| T68 | 127-130 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
| T69 | 270-273 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
| T70 | 373-376 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T14 | 315-317 | Disease | denotes | NB | http://purl.obolibrary.org/obo/MONDO_0005072 |
| T15 | 325-327 | Disease | denotes | NB | http://purl.obolibrary.org/obo/MONDO_0005072 |
| T16 | 335-337 | Disease | denotes | NB | http://purl.obolibrary.org/obo/MONDO_0005072 |
| T17 | 345-347 | Disease | denotes | NB | http://purl.obolibrary.org/obo/MONDO_0005072 |
| T18 | 355-357 | Disease | denotes | NB | http://purl.obolibrary.org/obo/MONDO_0005072 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T151 | 26-34 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T152 | 401-405 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 1 1 |
| T153 | 407-414 | http://purl.obolibrary.org/obo/CLO_0053001 | denotes | 1 1 4 |
| T154 | 439-443 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 1 1 |
| T155 | 445-452 | http://purl.obolibrary.org/obo/CLO_0053001 | denotes | 1 1 4 |
| T156 | 474-478 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 1 1 |
| T157 | 512-516 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 1 1 |
| T158 | 549-553 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 1 1 |
| T159 | 634-638 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 1 1 |
| T160 | 739-743 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 1 1 |
| T161 | 777-781 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 1 1 |
| T162 | 818-822 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 1 1 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T84 | 26-34 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T123 | 0-8 | Sentence | denotes | Table 3. |
| T124 | 10-179 | Sentence | denotes | 2019-nCoV 9-mer peptides predicted to bind 4 different HLA alleles by NetMHCpan 4.0, and those predicted to bind ≥ 3 HLA alleles and immunogenicity score ≥ 0.9 by iPred. |
| T125 | 180-281 | Sentence | denotes | For different alleles, 0 denotes non-binding and 1 denotes binding predicted for specific HLA allele. |
| T126 | 282-376 | Sentence | denotes | Antigen.epitope Imm.prob A0101.NB A0201.NB B0702.NB B4001.NB C0702.NB Total binding HLA |
| T127 | 377-414 | Sentence | denotes | VQMAPISAM 0.893938 0 1 1 1 1 4 |
| T128 | 415-452 | Sentence | denotes | AMYTPHTVL 0.862427 0 1 1 1 1 4 |
| T129 | 453-490 | Sentence | denotes | TLDSKTQSL 0.254998 1 1 1 0 1 4 |
| T130 | 491-528 | Sentence | denotes | KVDGVVQQL 0.191786 1 1 1 0 1 4 |
| T131 | 529-565 | Sentence | denotes | KVDGVDVEL 0.18632 1 1 1 0 1 4 |
| T132 | 566-603 | Sentence | denotes | MADQAMTQM 0.991227 1 0 1 0 1 3 |
| T133 | 604-641 | Sentence | denotes | LEAPFLYLY 0.983072 1 0 0 1 1 3 |
| T134 | 642-679 | Sentence | denotes | RTAPHGHVM 0.972153 1 0 1 0 1 3 |
| T135 | 680-717 | Sentence | denotes | IPFAMQMAY 0.961569 1 0 1 0 1 3 |
| T136 | 718-755 | Sentence | denotes | FLTENLLLY 0.951715 1 1 0 0 1 3 |
| T137 | 756-793 | Sentence | denotes | YLQPRTFLL 0.947743 1 1 0 0 1 3 |
| T138 | 794-831 | Sentence | denotes | MMISAGFSL 0.941318 0 1 1 0 1 3 |
| T139 | 832-869 | Sentence | denotes | ATLPKGIMM 0.926603 1 0 1 0 1 3 |