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PMC:7105881 / 26340-30935 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
893 284-287 Gene denotes MPL Gene:4352
894 961-964 Gene denotes Abs Gene:51428
895 1012-1016 Gene denotes ACE2 Gene:70008
896 2178-2183 Gene denotes IFN-γ Gene:3458
897 2185-2189 Gene denotes IL-2 Gene:3558
898 2191-2195 Gene denotes IL-4 Gene:3565
899 2197-2202 Gene denotes IL-10 Gene:3586
900 3016-3020 Gene denotes IgG1 Gene:16017
901 3026-3031 Gene denotes IgG2a Gene:668478
902 3150-3155 Gene denotes IFN-γ Gene:3458
903 3320-3323 Gene denotes MPL Gene:4352
904 3824-3829 Gene denotes IFN-γ Gene:3458
905 3834-3838 Gene denotes IL-4 Gene:3565
906 4045-4049 Gene denotes IgG1 Gene:16017
907 4055-4060 Gene denotes IgG2a Gene:668478
908 4123-4128 Gene denotes IFN-γ Gene:15978
909 4133-4138 Gene denotes IL-10 Gene:16153
910 4347-4353 Gene denotes IFN- γ Gene:3458
911 529-532 Gene denotes MPL Gene:4352
912 4547-4550 Gene denotes Abs Gene:51428
913 4273-4276 Gene denotes Abs Gene:51428
914 4021-4024 Gene denotes Abs Gene:51428
915 3706-3709 Gene denotes Abs Gene:51428
916 3379-3382 Gene denotes Abs Gene:51428
917 3006-3009 Gene denotes Abs Gene:51428
918 2662-2665 Gene denotes Abs Gene:51428
919 1959-1962 Gene denotes Abs Gene:51428
920 1420-1423 Gene denotes Abs Gene:51428
921 588-591 Gene denotes Abs Gene:51428
922 341-344 Gene denotes Abs Gene:51428
923 164-172 Species denotes SARS-CoV Tax:694009
924 239-247 Species denotes SARS-CoV Tax:694009
925 308-312 Species denotes mice Tax:10090
926 321-329 Species denotes SARS-CoV Tax:694009
927 407-415 Species denotes SARS-CoV Tax:694009
928 555-559 Species denotes mice Tax:10090
929 568-576 Species denotes SARS-CoV Tax:694009
930 610-614 Species denotes mice Tax:10090
931 678-695 Species denotes SARS-CoV (Urbani Tax:228330
932 728-732 Species denotes mice Tax:10090
933 751-767 Species denotes SARS-CoV (Urbani Tax:228330
934 899-903 Species denotes mice Tax:10090
935 923-931 Species denotes SARS-CoV Tax:694009
936 982-986 Species denotes mice Tax:10090
937 1056-1064 Species denotes SARS-CoV Tax:694009
938 1150-1166 Species denotes SARS-CoV (Urbani Tax:228330
939 1300-1308 Species denotes SARS-CoV Tax:694009
940 1373-1377 Species denotes mice Tax:10090
941 1379-1386 Species denotes Rabbits Tax:9986
942 1396-1404 Species denotes SARS-CoV Tax:694009
943 1433-1437 Species denotes mice Tax:10090
944 1442-1449 Species denotes rabbits Tax:9986
945 1477-1484 Species denotes rabbits Tax:9986
946 1509-1513 Species denotes mice Tax:10090
947 1526-1533 Species denotes rabbits Tax:9986
948 1550-1558 Species denotes SARS-CoV Tax:694009
949 1617-1621 Species denotes mice Tax:10090
950 1640-1648 Species denotes SARS-CoV Tax:694009
951 1685-1690 Species denotes mouse Tax:10090
952 1805-1813 Species denotes SARS-CoV Tax:694009
953 1924-1928 Species denotes mice Tax:10090
954 1937-1945 Species denotes SARS-CoV Tax:694009
955 2098-2106 Species denotes SARS-CoV Tax:694009
956 2129-2137 Species denotes SARS-CoV Tax:694009
957 2207-2211 Species denotes mice Tax:10090
958 2290-2294 Species denotes mice Tax:10090
959 2313-2321 Species denotes SARS-CoV Tax:694009
960 2512-2520 Species denotes SARS-CoV Tax:694009
961 2626-2630 Species denotes mice Tax:10090
962 2640-2648 Species denotes SARS-CoV Tax:694009
963 2735-2743 Species denotes SARS-CoV Tax:694009
964 2788-2792 Species denotes mice Tax:10090
965 2811-2819 Species denotes SARS-CoV Tax:694009
966 2974-2978 Species denotes mice Tax:10090
967 2988-2996 Species denotes SARS-CoV Tax:694009
968 3036-3040 Species denotes mice Tax:10090
969 3103-3111 Species denotes SARS-CoV Tax:694009
970 3160-3164 Species denotes mice Tax:10090
971 3231-3239 Species denotes SARS-CoV Tax:694009
972 3346-3350 Species denotes mice Tax:10090
973 3359-3367 Species denotes SARS-CoV Tax:694009
974 3401-3405 Species denotes mice Tax:10090
975 3466-3483 Species denotes SARS-CoV (Urbani Tax:228330
976 3516-3520 Species denotes mice Tax:10090
977 3539-3555 Species denotes SARS-CoV (Urbani Tax:228330
978 3671-3675 Species denotes mice Tax:10090
979 3685-3693 Species denotes SARS-CoV Tax:694009
980 3732-3736 Species denotes mice Tax:10090
981 3776-3784 Species denotes SARS-CoV Tax:694009
982 3843-3847 Species denotes mice Tax:10090
983 3897-3905 Species denotes SARS-CoV Tax:694009
984 3987-3991 Species denotes mice Tax:10090
985 4001-4009 Species denotes SARS-CoV Tax:694009
986 4065-4069 Species denotes mice Tax:10090
987 4152-4156 Species denotes mice Tax:10090
988 4239-4243 Species denotes mice Tax:10090
989 4253-4261 Species denotes SARS-CoV Tax:694009
990 4286-4290 Species denotes mice Tax:10090
991 4300-4308 Species denotes SARS-CoV Tax:694009
992 4358-4362 Species denotes mice Tax:10090
993 4438-4446 Species denotes patients Tax:9606
994 4460-4464 Species denotes mice Tax:10090
995 4469-4476 Species denotes rabbits Tax:9986
996 4501-4505 Species denotes mice Tax:10090
997 4511-4518 Species denotes rabbits Tax:9986
998 4527-4535 Species denotes SARS-CoV Tax:694009
999 4560-4570 Disease denotes rabbits N MESH:D001480
1000 216-220 CellLine denotes EC-S CVCL:5V07
1001 1560-1564 CellLine denotes BJ01 CVCL:6573
1002 1650-1654 CellLine denotes BJ01 CVCL:6573
1003 1770-1773 CellLine denotes CHO CVCL:0213
1004 1782-1785 CellLine denotes CHO CVCL:0213
1005 1896-1898 CellLine denotes H9 CVCL:1240
1006 2009-2012 CellLine denotes CHO CVCL:0213
1007 2030-2040 CellLine denotes RBD219-CHO CVCL:G580
1008 2071-2074 CellLine denotes CHO CVCL:0213
1009 2086-2096 CellLine denotes RBD219-CHO CVCL:G580
1010 2230-2240 CellLine denotes RBD219-CHO CVCL:G580
1011 2271-2274 CellLine denotes CHO CVCL:0213
1012 2358-2361 CellLine denotes CHO CVCL:0213
1013 2382-2392 CellLine denotes RBD219-CHO CVCL:G580
1014 2489-2493 CellLine denotes 293T CVCL:0063
1015 2603-2605 CellLine denotes H9 CVCL:1240

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T115 70-78 Body_part denotes Antibody http://purl.org/sig/ont/fma/fma62871
T116 199-206 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T117 221-229 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T118 346-349 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T119 488-496 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T120 593-596 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T121 820-825 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T122 852-859 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T123 955-960 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T124 966-969 Body_part denotes IgA http://purl.org/sig/ont/fma/fma62874
T125 974-977 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T126 1230-1235 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T127 1313-1320 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T128 1328-1335 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T129 1425-1428 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T130 1704-1712 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T131 1723-1728 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T132 1786-1794 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T133 2185-2189 Body_part denotes IL-2 http://purl.org/sig/ont/fma/fma84051
T134 2418-2421 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T135 2455-2460 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T136 2494-2501 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T137 2667-2670 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T138 2870-2873 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T139 2892-2897 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T140 2925-2932 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T141 3011-3014 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T142 3242-3249 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T143 3277-3285 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T144 3384-3387 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T145 3608-3613 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T146 3634-3641 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T147 3711-3714 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T148 3923-3931 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T149 3950-3957 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T150 4026-4029 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T151 4139-4148 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T152 4185-4192 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T153 4278-4281 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T154 4552-4555 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T11 955-960 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T115 164-172 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T116 239-247 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T117 252-255 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075
T119 321-329 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T120 407-415 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T121 568-576 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T122 678-686 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T123 751-759 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T124 923-931 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T125 1056-1064 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T126 1093-1096 Disease denotes ADE http://purl.obolibrary.org/obo/MONDO_0019383
T127 1150-1158 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T128 1300-1308 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T129 1396-1404 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T130 1550-1558 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T131 1640-1648 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T132 1805-1813 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T133 1937-1945 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T134 2098-2106 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T135 2129-2137 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T136 2313-2321 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T137 2512-2520 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T138 2640-2648 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T139 2735-2743 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T140 2811-2819 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T141 2988-2996 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T142 3103-3111 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T143 3231-3239 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T144 3359-3367 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T145 3466-3474 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T146 3539-3547 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T147 3685-3693 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T148 3776-3784 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T149 3897-3905 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T150 4001-4009 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T151 4253-4261 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T152 4300-4308 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T153 4433-4437 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T154 4527-4535 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T274 55-61 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes Animal
T275 207-209 http://purl.obolibrary.org/obo/CLO_0003358 denotes FL
T276 216-218 http://purl.obolibrary.org/obo/CLO_0002878 denotes EC
T277 248-250 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T278 266-268 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T279 266-268 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T280 449-450 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T281 454-455 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T282 500-501 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T283 637-640 http://purl.obolibrary.org/obo/CLO_0054060 denotes 102
T284 645-650 http://purl.obolibrary.org/obo/CLO_0050050 denotes S; ∼1
T285 655-658 http://purl.obolibrary.org/obo/CLO_0054060 denotes 102
T286 706-707 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T287 820-825 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T288 827-829 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T289 827-829 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T290 863-864 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T291 905-913 http://purl.obolibrary.org/obo/NCBITaxon_10026 denotes Hamsters
T292 991-999 http://purl.obolibrary.org/obo/NCBITaxon_10026 denotes hamsters
T293 1100-1101 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T294 1123-1131 http://purl.obolibrary.org/obo/NCBITaxon_10026 denotes hamsters
T295 1230-1235 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T296 1325-1327 http://purl.obolibrary.org/obo/CLO_0052676 denotes Fc
T297 1339-1340 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T298 1576-1577 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T299 1598-1601 http://purl.obolibrary.org/obo/CLO_0053799 denotes 4/5
T300 1685-1690 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T301 1723-1728 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T302 1770-1773 http://purl.obolibrary.org/obo/CLO_0002421 denotes CHO
T303 1770-1773 http://purl.obolibrary.org/obo/CLO_0052479 denotes CHO
T304 1770-1773 http://purl.obolibrary.org/obo/CLO_0052480 denotes CHO
T305 1770-1773 http://purl.obolibrary.org/obo/CLO_0052483 denotes CHO
T306 1770-1773 http://purl.obolibrary.org/obo/CLO_0052484 denotes CHO
T307 1770-1773 http://purl.obolibrary.org/obo/CLO_0052485 denotes CHO
T308 1782-1785 http://purl.obolibrary.org/obo/CLO_0002421 denotes CHO
T309 1782-1785 http://purl.obolibrary.org/obo/CLO_0052479 denotes CHO
T310 1782-1785 http://purl.obolibrary.org/obo/CLO_0052480 denotes CHO
T311 1782-1785 http://purl.obolibrary.org/obo/CLO_0052483 denotes CHO
T312 1782-1785 http://purl.obolibrary.org/obo/CLO_0052484 denotes CHO
T313 1782-1785 http://purl.obolibrary.org/obo/CLO_0052485 denotes CHO
T314 2009-2012 http://purl.obolibrary.org/obo/CLO_0002421 denotes CHO
T315 2009-2012 http://purl.obolibrary.org/obo/CLO_0052479 denotes CHO
T316 2009-2012 http://purl.obolibrary.org/obo/CLO_0052480 denotes CHO
T317 2009-2012 http://purl.obolibrary.org/obo/CLO_0052483 denotes CHO
T318 2009-2012 http://purl.obolibrary.org/obo/CLO_0052484 denotes CHO
T319 2009-2012 http://purl.obolibrary.org/obo/CLO_0052485 denotes CHO
T320 2037-2040 http://purl.obolibrary.org/obo/CLO_0002421 denotes CHO
T321 2037-2040 http://purl.obolibrary.org/obo/CLO_0052479 denotes CHO
T322 2037-2040 http://purl.obolibrary.org/obo/CLO_0052480 denotes CHO
T323 2037-2040 http://purl.obolibrary.org/obo/CLO_0052483 denotes CHO
T324 2037-2040 http://purl.obolibrary.org/obo/CLO_0052484 denotes CHO
T325 2037-2040 http://purl.obolibrary.org/obo/CLO_0052485 denotes CHO
T326 2071-2074 http://purl.obolibrary.org/obo/CLO_0002421 denotes CHO
T327 2071-2074 http://purl.obolibrary.org/obo/CLO_0052479 denotes CHO
T328 2071-2074 http://purl.obolibrary.org/obo/CLO_0052480 denotes CHO
T329 2071-2074 http://purl.obolibrary.org/obo/CLO_0052483 denotes CHO
T330 2071-2074 http://purl.obolibrary.org/obo/CLO_0052484 denotes CHO
T331 2071-2074 http://purl.obolibrary.org/obo/CLO_0052485 denotes CHO
T332 2093-2096 http://purl.obolibrary.org/obo/CLO_0002421 denotes CHO
T333 2093-2096 http://purl.obolibrary.org/obo/CLO_0052479 denotes CHO
T334 2093-2096 http://purl.obolibrary.org/obo/CLO_0052480 denotes CHO
T335 2093-2096 http://purl.obolibrary.org/obo/CLO_0052483 denotes CHO
T336 2093-2096 http://purl.obolibrary.org/obo/CLO_0052484 denotes CHO
T337 2093-2096 http://purl.obolibrary.org/obo/CLO_0052485 denotes CHO
T338 2185-2189 http://purl.obolibrary.org/obo/PR_000001379 denotes IL-2
T339 2237-2240 http://purl.obolibrary.org/obo/CLO_0002421 denotes CHO
T340 2237-2240 http://purl.obolibrary.org/obo/CLO_0052479 denotes CHO
T341 2237-2240 http://purl.obolibrary.org/obo/CLO_0052480 denotes CHO
T342 2237-2240 http://purl.obolibrary.org/obo/CLO_0052483 denotes CHO
T343 2237-2240 http://purl.obolibrary.org/obo/CLO_0052484 denotes CHO
T344 2237-2240 http://purl.obolibrary.org/obo/CLO_0052485 denotes CHO
T345 2255-2258 http://purl.obolibrary.org/obo/CLO_0001000 denotes 3/5
T346 2271-2274 http://purl.obolibrary.org/obo/CLO_0002421 denotes CHO
T347 2271-2274 http://purl.obolibrary.org/obo/CLO_0052479 denotes CHO
T348 2271-2274 http://purl.obolibrary.org/obo/CLO_0052480 denotes CHO
T349 2271-2274 http://purl.obolibrary.org/obo/CLO_0052483 denotes CHO
T350 2271-2274 http://purl.obolibrary.org/obo/CLO_0052484 denotes CHO
T351 2271-2274 http://purl.obolibrary.org/obo/CLO_0052485 denotes CHO
T352 2358-2361 http://purl.obolibrary.org/obo/CLO_0002421 denotes CHO
T353 2358-2361 http://purl.obolibrary.org/obo/CLO_0052479 denotes CHO
T354 2358-2361 http://purl.obolibrary.org/obo/CLO_0052480 denotes CHO
T355 2358-2361 http://purl.obolibrary.org/obo/CLO_0052483 denotes CHO
T356 2358-2361 http://purl.obolibrary.org/obo/CLO_0052484 denotes CHO
T357 2358-2361 http://purl.obolibrary.org/obo/CLO_0052485 denotes CHO
T358 2389-2392 http://purl.obolibrary.org/obo/CLO_0002421 denotes CHO
T359 2389-2392 http://purl.obolibrary.org/obo/CLO_0052479 denotes CHO
T360 2389-2392 http://purl.obolibrary.org/obo/CLO_0052480 denotes CHO
T361 2389-2392 http://purl.obolibrary.org/obo/CLO_0052483 denotes CHO
T362 2389-2392 http://purl.obolibrary.org/obo/CLO_0052484 denotes CHO
T363 2389-2392 http://purl.obolibrary.org/obo/CLO_0052485 denotes CHO
T364 2455-2460 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T365 2489-2493 http://purl.obolibrary.org/obo/CLO_0050894 denotes 293T
T366 2489-2493 http://purl.obolibrary.org/obo/CLO_0051650 denotes 293T
T367 2489-2493 http://purl.obolibrary.org/obo/CLO_0052052 denotes 293T
T368 2608-2611 http://purl.obolibrary.org/obo/CLO_0051568 denotes SAS
T369 2761-2762 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T370 2892-2897 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T371 2936-2937 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T372 3168-3169 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T373 3260-3262 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T374 3267-3269 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T375 3289-3290 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T376 3429-3432 http://purl.obolibrary.org/obo/CLO_0054060 denotes 102
T377 3437-3439 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T378 3450-3452 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T379 3494-3495 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T380 3608-3613 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T381 3615-3617 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T382 3615-3617 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T383 3631-3633 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T384 3631-3633 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T385 3645-3646 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T386 3694-3696 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T387 3694-3696 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T388 3758-3766 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T389 3785-3787 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T390 3785-3787 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T391 3851-3852 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T392 3961-3962 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T393 4160-4161 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T394 4196-4197 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T395 4366-4367 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T396 4386-4388 http://purl.obolibrary.org/obo/CLO_0007448 denotes M1
T397 4386-4388 http://purl.obolibrary.org/obo/CLO_0050175 denotes M1
T398 4405-4413 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T399 4571-4572 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T400 4576-4577 http://purl.obolibrary.org/obo/CLO_0001020 denotes A

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T121 199-206 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T122 207-209 Chemical denotes FL http://purl.obolibrary.org/obo/CHEBI_91150
T123 221-229 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T124 266-268 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T125 488-496 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T126 512-516 Chemical denotes Gold http://purl.obolibrary.org/obo/CHEBI_29287
T127 827-829 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T128 852-859 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T129 1313-1320 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T130 1328-1335 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T131 1786-1794 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T132 2185-2187 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T134 2191-2193 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T136 2197-2199 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T138 2494-2501 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T139 2925-2932 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T140 3242-3249 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T141 3277-3285 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T142 3301-3305 Chemical denotes Gold http://purl.obolibrary.org/obo/CHEBI_29287
T143 3615-3617 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T144 3631-3633 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T145 3634-3641 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T146 3694-3696 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T147 3785-3787 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T148 3834-3836 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T150 3854-3857 Chemical denotes Guo http://purl.obolibrary.org/obo/CHEBI_16750
T151 3923-3931 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T152 3950-3957 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T153 4133-4135 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T155 4185-4192 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T156 4386-4388 Chemical denotes M1 http://purl.obolibrary.org/obo/CHEBI_51079|http://purl.obolibrary.org/obo/CHEBI_139019|http://purl.obolibrary.org/obo/CHEBI_140152|http://purl.obolibrary.org/obo/CHEBI_34826
T160 4405-4413 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T46 89-113 http://purl.obolibrary.org/obo/GO_0002456 denotes Cellular immune response
T47 89-113 http://purl.obolibrary.org/obo/GO_0002449 denotes Cellular immune response
T48 89-113 http://purl.obolibrary.org/obo/GO_0002443 denotes Cellular immune response
T49 98-113 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T50 2151-2176 http://purl.obolibrary.org/obo/GO_0002456 denotes cellular immune responses
T51 2151-2176 http://purl.obolibrary.org/obo/GO_0002449 denotes cellular immune responses
T52 2151-2176 http://purl.obolibrary.org/obo/GO_0002443 denotes cellular immune responses
T53 3080-3093 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T54 3123-3148 http://purl.obolibrary.org/obo/GO_0002456 denotes cellular immune responses
T55 3123-3148 http://purl.obolibrary.org/obo/GO_0002449 denotes cellular immune responses
T56 3123-3148 http://purl.obolibrary.org/obo/GO_0002443 denotes cellular immune responses
T57 3797-3822 http://purl.obolibrary.org/obo/GO_0002456 denotes cellular immune responses
T58 3797-3822 http://purl.obolibrary.org/obo/GO_0002449 denotes cellular immune responses
T59 3797-3822 http://purl.obolibrary.org/obo/GO_0002443 denotes cellular immune responses
T60 4079-4104 http://purl.obolibrary.org/obo/GO_0002456 denotes cellular immune responses
T61 4079-4104 http://purl.obolibrary.org/obo/GO_0002449 denotes cellular immune responses
T62 4079-4104 http://purl.obolibrary.org/obo/GO_0002443 denotes cellular immune responses
T63 4320-4345 http://purl.obolibrary.org/obo/GO_0002456 denotes cellular immune responses
T64 4320-4345 http://purl.obolibrary.org/obo/GO_0002449 denotes cellular immune responses
T65 4320-4345 http://purl.obolibrary.org/obo/GO_0002443 denotes cellular immune responses

2_test

Id Subject Object Predicate Lexical cue
32265848-23573979-36511114 838-842 23573979 denotes 2013
32265848-17049691-36511115 1249-1253 17049691 denotes 2007
32265848-22311359-36511116 1269-1273 22311359 denotes 2012
32265848-15474494-36511117 1741-1745 15474494 denotes 2004
32265848-17092615-36511118 1758-1762 17092615 denotes 2007
32265848-20374001-36511120 2480-2484 20374001 denotes 2010
32265848-16919855-36511122 3192-3196 16919855 denotes 2007
32265848-23573979-36511123 3626-3630 23573979 denotes 2013
32265848-16101349-36511124 3866-3870 16101349 denotes 2005
32265848-19523911-36511125 4177-4181 19523911 denotes 2009
32265848-16494977-36511126 4381-4385 16494977 denotes 2006

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T158 0-137 Sentence denotes Name Antigenicity and functionality Adjuvant Route Animal models Antibody response Cellular immune response Protection References
T159 138-206 Sentence denotes Subunit vaccines based on SARS-CoV full-length or trimeric S protein
T160 207-299 Sentence denotes FL-S and EC-S proteins Bind to SARS-CoV S1, NTD, RBD, and S2-specific mAbs MPL + TDM S.C.
T161 301-355 Sentence denotes BALB/c mice Elicit SARS-CoV S-specific Abs (IgG, > 1:
T162 356-473 Sentence denotes 2 × 105), neutralizing (> 1:2.4 × 104) pseudotyped SARS-CoV (Tor2, GD03, and SZ3 strains) N/A N/A He et al., 2006a
T163 474-546 Sentence denotes S andS-foldon proteins N/A TiterMax Gold; Alum Hydro+MPL S.C. or I.M.
T164 548-842 Sentence denotes BALB/c mice Elicit SARS-CoV S-specific Abs (IgG, > 1:104) in mice, neutralizing (∼2.4 × 102 for S; ∼1:7 × 102 for S-foldon) live SARS-CoV (Urbani strain) N/A Protect vaccinated mice from challenge of SARS-CoV (Urbani strain, 105 TCID50) with undetectable viral load in lungs Li et al., 2013
T165 843-890 Sentence denotes triSpike protein N/A Alum hydro I.P. or S.C.
T166 892-1273 Sentence denotes BALB/c mice; Hamsters Elicits SARS-CoV S-specific mucosal and serum Abs (IgA and IgG) in mice and hamsters, blocking S-ACE2 receptor binding and neutralizing live SARS-CoV (HKU-39849 strain); induces ADE N/A Protects vaccinated hamsters from challenge of SARS-CoV (Urbani strain, 103 TCID50) with undetectable or reduced viral load in lungs Kam et al., 2007; Jaume et al., 2012
T167 1274-1320 Sentence denotes Subunit vaccines based on SARS-CoV RBD protein
T168 1321-1364 Sentence denotes RBD-Fc protein N/A Freund’s I.D. or I.M.
T169 1366-1514 Sentence denotes BALB/c mice; Rabbits Elicits SARS-CoV S/RBD-specific Abs (IgG) in mice and rabbits, neutralizing pseudotyped (rabbits: ≥ 7.3 × 104) and live (mice:
T170 1515-1762 Sentence denotes 1:4 × 103; rabbits: > 1:1.5 × 104) SARS-CoV (BJ01 strain) N/A Protects majority (4/5) of vaccinated mice from challenge of SARS-CoV (BJ01 strain, 106 TCID50), with one mouse showing mild alveolar damage in lungs He et al., 2004; Du et al., 2007
T171 1763-1915 Sentence denotes RBD193-CHO; RBD219-CHO proteins Binds to SARS-CoV RBD-specific mAbs (neutralizing 24H8, 31H12, 35B5, 33G4, 19B2; non-neutralizing 17H9) Freund’s S.C.
T172 1917-2484 Sentence denotes BALB/c mice Elicit SARS-CoV RBD-specific Abs, neutralizing pseudotyped (< 1:104 for RBD193-CHO; 1:5.8 × 104 for RBD219-CHO) and live (< 1:103 for RBD193-CHO; 1:103 for RBD219-CHO) SARS-CoV (GZ50 strain) Induce SARS-CoV RBD-specific cellular immune responses (IFN-γ, IL-2, IL-4, IL-10) in mice Protect all (for RBD219-CHO) or majority (3/5, for RBD219-CHO) of vaccinated mice from challenge of SARS-CoV (GZ50 strain, 100 TCID50 for RBD193-CHO; 5 × 105 TCID50 for RBD219-CHO) with undetectable viral RNA or no, to reduced, viral load in lungs Du et al., 2009c, 2010
T173 2485-2617 Sentence denotes RBD-293T protein Binds to SARS-CoV RBD-specific mAbs (neutralizing 24H8, 31H12, 35B5, 33G4, 19B2; non-neutralizing 17H9) SAS S.C.
T174 2619-2915 Sentence denotes BALB/c mice Elicits SARS-CoV RBD-specific Abs (IgG), neutralizing pseudotyped (1:6.9 × 105) and live (1:1.6 × 103) SARS-CoV (GZ50 strain) N/A Protects all vaccinated mice from challenge of SARS-CoV (GZ50 strain, 100 TCID50) with undetectable viral RNA and viral load in lungs Du et al., 2009b
T175 2916-2961 Sentence denotes S318-510 protein N/A Alum; Alum + CpG S.C.
T176 2963-3041 Sentence denotes 129S6/SvEv mice Elicits SARS-CoV-specific Abs (IgG, IgG1, and IgG2a) in mice.
T177 3042-3196 Sentence denotes Reduces neutralization after removing glycosylation Induces SARS-CoV S-specific cellular immune responses (IFN-γ) in mice N/A Zakhartchouk et al., 2007
T178 3197-3259 Sentence denotes Subunit vaccines based on non-RBD SARS-CoV S protein fragments
T179 3260-3337 Sentence denotes S1 and S1-foldon proteins N/A TiterMax Gold; Alum Hydro + MPL S.C. or I.M.
T180 3339-3630 Sentence denotes BALB/c mice Elicit SARS-CoV S-specific Abs (IgG, > 1:104) in mice, neutralizing (1:1.7 × 102 for S1; 1:90 for S1-foldon) live SARS-CoV (Urbani strain) N/A Protect vaccinated mice from challenge of SARS-CoV (Urbani strain, 105 TCID50) with undetectable viral load in lungs Li et al., 2013
T181 3631-3662 Sentence denotes S2 protein N/A Freund’s S.C.
T182 3664-3870 Sentence denotes BALB/c mice Elicits SARS-CoV S2-specific Abs (IgG, 1:1.6 × 103) in mice with no neutralizing activity Induces SARS-CoV S2-specific cellular immune responses (IFN-γ and IL-4) in mice N/A Guo et al., 2005
T183 3871-3946 Sentence denotes Subunit vaccines based on SARS-CoV non-S structural proteins (i.e. N and M)
T184 3947-3978 Sentence denotes rN protein N/A Freund’s I.P.
T185 3980-4181 Sentence denotes BALB/c mice Elicits SARS-CoV N-specific Abs (IgG (1:1.8 × 103), IgG1, and IgG2a) in mice Induces cellular immune responses with up-regulated IFN-γ and IL-10 cytokines in mice N/A Zheng et al., 2009
T186 4182-4230 Sentence denotes rN protein N/A Montanide + CpG; Freund’s S.C.
T187 4232-4385 Sentence denotes BALB/c mice Elicits SARS-CoV N-specific Abs (IgG) in mice Induces SARS-CoV N-specific cellular immune responses (IFN- γ) in mice N/A Liu et al., 2006
T188 4386-4492 Sentence denotes M1-31 and M132-161 peptides Bind to sera from SARS patients or immunized mice and rabbits Freund’s I.D.
T189 4494-4595 Sentence denotes BALB/c mice; NZW rabbits Induce SARS-CoV M-specific Abs (IgG) in rabbits N/A N/A He et al., 2005b