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PMC:7105881 / 16155-17597 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
555 268-290 Gene denotes dipeptidyl peptidase 4 Gene:1803
556 292-296 Gene denotes DPP4 Gene:1803
557 406-410 Gene denotes ACE2 Gene:59272
558 754-758 Gene denotes DPP4 Gene:1803
559 981-985 Gene denotes DPP4 Gene:1803
560 1120-1124 Gene denotes DPP4 Gene:1803
561 1386-1390 Gene denotes DPP4 Gene:1803
562 0-8 Species denotes MERS-CoV Tax:1335626
563 135-143 Species denotes SARS-CoV Tax:694009
564 211-219 Species denotes MERS-CoV Tax:1335626
565 250-258 Species denotes MERS-CoV Tax:1335626
566 388-396 Species denotes SARS-CoV Tax:694009
567 441-449 Species denotes SARS-CoV Tax:694009
568 454-462 Species denotes MERS-CoV Tax:1335626
569 594-602 Species denotes MERS-CoV Tax:1335626
570 658-666 Species denotes SARS-CoV Tax:694009
571 731-739 Species denotes MERS-CoV Tax:1335626
572 834-842 Species denotes MERS-CoV Tax:1335626
573 975-980 Species denotes human Tax:9606
574 1050-1054 Species denotes CoVs Tax:11118
575 1062-1066 Species denotes CoVs Tax:11118
576 1114-1119 Species denotes human Tax:9606
577 1232-1235 Species denotes CoV Tax:11118
578 1249-1254 Species denotes human Tax:9606
579 1323-1331 Species denotes MERS-CoV Tax:1335626
580 871-875 Species denotes HKU4 Tax:694007
581 890-894 Species denotes HKU5 Tax:290028
582 935-939 Species denotes HKU4 Tax:694007
583 959-963 Species denotes HKU5 Tax:290028
584 74-82 Species denotes SARS-CoV Tax:694009
585 925-927 Chemical denotes Ty

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T77 1136-1141 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T78 1334-1341 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T59 74-82 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T60 135-143 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T61 388-396 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T62 441-449 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T63 658-666 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T193 20-21 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T194 199-207 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T195 301-302 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T196 583-585 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T197 583-585 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T198 627-628 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T199 975-980 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T200 989-990 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T201 1094-1098 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T202 1114-1119 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T203 1136-1141 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T204 1155-1159 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T205 1249-1254 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T74 583-585 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T75 880-882 Chemical denotes Pi http://purl.obolibrary.org/obo/CHEBI_35780
T76 949-951 Chemical denotes Pi http://purl.obolibrary.org/obo/CHEBI_35780
T77 1143-1146 Chemical denotes Lau http://purl.obolibrary.org/obo/CHEBI_32359
T78 1334-1341 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

2_test

Id Subject Object Predicate Lexical cue
32265848-23835475-36511060 97-101 23835475 denotes 2013
32265848-23486063-36511062 354-358 23486063 denotes 2013
32265848-25428871-36511063 587-591 25428871 denotes 2015
32265848-28807998-36511064 808-812 28807998 denotes 2017
32265848-28393837-36511065 827-831 28393837 denotes 2017
32265848-29346682-36511067 1155-1159 29346682 denotes 2018

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T99 0-103 Sentence denotes MERS-CoV RBD shares a structure similar to that of the homology domain of SARS-CoV (Wang et al., 2013).
T100 104-239 Sentence denotes However, antibodies induced by SARS-CoV RBD have no cross-reactivity and/or cross-neutralizing activity to MERS-CoV (Du et al., 2013b).
T101 240-411 Sentence denotes Moreover, MERS-CoV utilizes dipeptidyl peptidase 4 (DPP4) as a receptor through the RBD (CTD) region (Raj et al., 2013), which is distinct from the SARS-CoV receptor ACE2.
T102 412-593 Sentence denotes Although the core regions of SARS-CoV and MERS-CoV RBDs are similar, their RBM regions are significantly different, which explains why they recognize different receptors (Li, 2015).
T103 594-676 Sentence denotes MERS-CoV S trimer also maintains a structure similar to that of SARS-CoV S trimer.
T104 677-833 Sentence denotes Both standing and lying states can be detected in the MERS-CoV RBDs, whereas DPP4 only binds to the standing RBD (Pallesen et al., 2017; Yuan et al., 2017).
T105 834-924 Sentence denotes MERS-CoV is clustered with Ty-BatCoV HKU4 and Pi-BatCoV HKU5 in the subgenus Merbecovirus.
T106 925-1021 Sentence denotes Ty-BatCoV HKU4, but not Pi-BatCoV HKU5, could use human DPP4 as a receptor (Yang et al., 2014b).
T107 1022-1180 Sentence denotes Recently, some MERS-related CoVs (MERSr-CoVs) have been discovered from bats that can enter human DPP4-expressing cells (Lau et al., 2018; Luo et al., 2018a).
T108 1181-1318 Sentence denotes These findings suggest that the emergence of MERSr-CoV may threaten human health owing to their potential for cross-species transmission.
T109 1319-1442 Sentence denotes The MERS-CoV S protein and RBD and their complexes, along with the DPP4 receptor, are shown in Supplementary Figures S1C,D.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T302 0-8 SP_9 denotes MERS-CoV
T303 55-63 SO:0000853 denotes homology
T304 64-70 SO:0000417 denotes domain
T305 74-82 SP_10 denotes SARS-CoV
T306 113-123 GO:0042571 denotes antibodies
T307 135-143 SP_10 denotes SARS-CoV
T308 211-219 SP_9 denotes MERS-CoV
T309 250-258 SP_9 denotes MERS-CoV
T310 279-290 PR:000012546 denotes peptidase 4
T311 292-296 PR:000001341;PG_7 denotes DPP4
T312 388-396 SP_10 denotes SARS-CoV
T313 406-410 PR:000003622;G_3;PG_10 denotes ACE2
T314 441-449 SP_10 denotes SARS-CoV
T315 454-462 SP_9 denotes MERS-CoV
T316 594-602 SP_9 denotes MERS-CoV
T317 658-666 SP_10 denotes SARS-CoV
T318 731-739 SP_9 denotes MERS-CoV
T319 754-758 PG_7;PR:000001341 denotes DPP4
T320 834-842 SP_9 denotes MERS-CoV
T321 975-980 SP_6;NCBITaxon:9606 denotes human
T322 981-985 PG_7;PR:000001341 denotes DPP4
T323 1037-1041 SP_9 denotes MERS
T324 1094-1098 SP_2;NCBITaxon:8342 denotes bats
T325 1114-1119 SP_6;NCBITaxon:9606 denotes human
T326 1120-1124 PG_7;PR:000001341 denotes DPP4
T327 1125-1135 GO:0010467 denotes expressing
T328 1249-1254 SP_6;NCBITaxon:9606 denotes human
T329 1297-1304 NCBITaxon:species denotes species
T330 1323-1331 SP_9 denotes MERS-CoV
T331 1332-1341 PG_1 denotes S protein
T332 1360-1369 GO:0032991 denotes complexes
T333 1386-1390 PG_7;PR:000001341 denotes DPP4
T29983 0-8 SP_9 denotes MERS-CoV
T17057 55-63 SO:0000853 denotes homology
T32008 64-70 SO:0000417 denotes domain
T56589 74-82 SP_10 denotes SARS-CoV
T57877 113-123 GO:0042571 denotes antibodies
T96396 135-143 SP_10 denotes SARS-CoV
T84761 211-219 SP_9 denotes MERS-CoV
T4692 250-258 SP_9 denotes MERS-CoV
T69481 279-290 PR:000012546 denotes peptidase 4
T91688 292-296 PR:000001341;PG_7 denotes DPP4
T56470 388-396 SP_10 denotes SARS-CoV
T53532 406-410 PR:000003622;G_3;PG_10 denotes ACE2
T12186 441-449 SP_10 denotes SARS-CoV
T61058 454-462 SP_9 denotes MERS-CoV
T96781 594-602 SP_9 denotes MERS-CoV
T61210 658-666 SP_10 denotes SARS-CoV
T31903 731-739 SP_9 denotes MERS-CoV
T62435 754-758 PG_7;PR:000001341 denotes DPP4
T27691 834-842 SP_9 denotes MERS-CoV
T96680 975-980 SP_6;NCBITaxon:9606 denotes human
T87087 981-985 PG_7;PR:000001341 denotes DPP4
T52550 1037-1041 SP_9 denotes MERS
T37578 1094-1098 SP_2;NCBITaxon:8342 denotes bats
T90449 1114-1119 SP_6;NCBITaxon:9606 denotes human
T19922 1120-1124 PG_7;PR:000001341 denotes DPP4
T67319 1125-1135 GO:0010467 denotes expressing
T99843 1249-1254 SP_6;NCBITaxon:9606 denotes human
T78701 1297-1304 NCBITaxon:species denotes species
T14528 1323-1331 SP_9 denotes MERS-CoV
T7216 1332-1341 PG_1 denotes S protein
T77879 1360-1369 GO:0032991 denotes complexes
T55323 1386-1390 PG_7;PR:000001341 denotes DPP4