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PMC:7105881 / 12233-13011 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
449 613-614 Gene denotes N Gene:43740575
450 33-41 Species denotes SARS-CoV Tax:694009
451 43-51 Species denotes MERS-CoV Tax:1335626
452 57-66 Species denotes 2019-nCoV Tax:2697049
453 117-125 Species denotes SARS-CoV Tax:694009
454 127-135 Species denotes MERS-CoV Tax:1335626
455 141-150 Species denotes 2019-nCoV Tax:2697049
456 458-466 Species denotes SARS-CoV Tax:694009
457 495-503 Species denotes MERS-CoV Tax:1335626
458 540-549 Species denotes 2019-nCoV Tax:2697049
459 710-718 Species denotes SARS-CoV Tax:694009
460 720-728 Species denotes MERS-CoV Tax:1335626
461 734-743 Species denotes 2019-nCoV Tax:2697049

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T44 227-235 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T45 306-314 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T46 342-350 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T47 399-407 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T48 769-777 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T43 33-41 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T44 117-125 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T45 458-466 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T46 710-718 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T119 69-70 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T120 101-113 http://purl.obolibrary.org/obo/OBI_0000245 denotes organization
T121 272-280 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T122 510-515 http://purl.obolibrary.org/obo/CLO_0053817 denotes 3a, 6
T123 654-656 http://purl.obolibrary.org/obo/CLO_0007074 denotes Kb
T124 654-656 http://purl.obolibrary.org/obo/CLO_0051988 denotes Kb
T125 674-675 http://purl.obolibrary.org/obo/CLO_0001021 denotes B

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T35 227-235 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T36 306-314 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T37 342-350 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T38 399-407 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T39 769-777 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T72 0-151 Sentence denotes FIGURE 2 Schematic structure of SARS-CoV, MERS-CoV, and 2019-nCoV. (A) Schematic diagram of genomic organization of SARS-CoV, MERS-CoV, and 2019-nCoV.
T73 152-215 Sentence denotes The genomic regions or open-reading frames (ORFs) are compared.
T74 216-565 Sentence denotes Structural proteins, including spike (S), envelope (E), membrane (M) and nucleocapsid (N) proteins, as well as non-structural proteins translated from ORF 1a and ORF 1b and accessory proteins, including 3a, 3b, 6, 7a, 7b, 8a, 8b, and 9b (for SARS-CoV), 3, 4a, 4b, 5, and 8b (for MERS-CoV), and 3a, 6, 7a, 7b, 8, and 10 (for 2019-nCoV) are indicated.
T75 566-653 Sentence denotes 5′-UTR and 3′-UTR, untranslated regions at the N- and C-terminal regions, respectively.
T76 654-778 Sentence denotes Kb, kilobase pair. (B) Schematic structure of virion of SARS-CoV, MERS-CoV, and 2019-nCoV and its major structural proteins.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T216 33-41 SP_10 denotes SARS-CoV
T217 43-51 SP_9 denotes MERS-CoV
T218 57-66 SP_7 denotes 2019-nCoV
T219 93-100 SO:0001026 denotes genomic
T220 117-125 SP_10 denotes SARS-CoV
T221 127-135 SP_9 denotes MERS-CoV
T222 141-150 SP_7 denotes 2019-nCoV
T223 156-163 SO:0001026 denotes genomic
T224 175-194 SO:0000236 denotes open-reading frames
T225 196-200 SO:0000236 denotes ORFs
T226 258-266 GO:0031975 denotes envelope
T227 272-280 GO:0016020 denotes membrane
T228 289-301 GO:0000786 denotes nucleocapsid
T229 351-361 GO:0006412 denotes translated
T230 367-370 SO:0000236 denotes ORF
T231 378-381 SO:0000236 denotes ORF
T232 458-466 SP_10 denotes SARS-CoV
T233 495-503 SP_9 denotes MERS-CoV
T234 540-549 SP_7 denotes 2019-nCoV
T235 566-572 SO:0000204 denotes 5′-UTR
T236 577-580 SO:0000205 denotes 3′-
T237 580-583 SO:0000203 denotes UTR
T238 585-597 GO:0006412;SO:0000203 denotes untranslated
T239 598-605 SO:0000203 denotes regions
T240 613-615 SO:0000204 denotes N-
T241 667-671 SO:0000028 denotes pair
T242 710-718 SP_10 denotes SARS-CoV
T243 720-728 SP_9 denotes MERS-CoV
T244 734-743 SP_7 denotes 2019-nCoV
T68938 33-41 SP_10 denotes SARS-CoV
T14236 43-51 SP_9 denotes MERS-CoV
T4340 57-66 SP_7 denotes 2019-nCoV
T76523 93-100 SO:0001026 denotes genomic
T22537 117-125 SP_10 denotes SARS-CoV
T91705 127-135 SP_9 denotes MERS-CoV
T26104 141-150 SP_7 denotes 2019-nCoV
T79836 156-163 SO:0001026 denotes genomic
T84618 175-194 SO:0000236 denotes open-reading frames
T19063 196-200 SO:0000236 denotes ORFs
T98118 258-266 GO:0031975 denotes envelope
T3600 272-280 GO:0016020 denotes membrane
T24611 289-301 GO:0000786 denotes nucleocapsid
T62198 351-361 GO:0006412 denotes translated
T42846 367-370 SO:0000236 denotes ORF
T50694 378-381 SO:0000236 denotes ORF
T80205 458-466 SP_10 denotes SARS-CoV
T50023 495-503 SP_9 denotes MERS-CoV
T9028 540-549 SP_7 denotes 2019-nCoV
T26735 566-572 SO:0000204 denotes 5′-UTR
T15719 577-580 SO:0000205 denotes 3′-
T80430 580-583 SO:0000203 denotes UTR
T73692 585-597 GO:0006412;SO:0000203 denotes untranslated
T18701 598-605 SO:0000203 denotes regions
T25285 613-615 SO:0000204 denotes N-
T15989 667-671 SO:0000028 denotes pair
T64360 710-718 SP_10 denotes SARS-CoV
T58689 720-728 SP_9 denotes MERS-CoV
T91484 734-743 SP_7 denotes 2019-nCoV