PMC:7102560 / 5082-8330
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T12 | 431-453 | Body_part | denotes | mediastinal lymph node | http://purl.org/sig/ont/fma/fma12774 |
| T13 | 702-706 | Body_part | denotes | body | http://purl.org/sig/ont/fma/fma256135 |
| T14 | 794-798 | Body_part | denotes | body | http://purl.org/sig/ont/fma/fma256135 |
| T15 | 833-856 | Body_part | denotes | upper respiratory tract | http://purl.org/sig/ont/fma/fma45661 |
| T16 | 923-929 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T17 | 1651-1657 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T18 | 1729-1745 | Body_part | denotes | White blood cell | http://purl.org/sig/ont/fma/fma62852 |
| T19 | 1741-1745 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T20 | 1759-1764 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T21 | 1792-1802 | Body_part | denotes | Neutrophil | http://purl.org/sig/ont/fma/fma62860 |
| T22 | 1816-1821 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T23 | 1849-1859 | Body_part | denotes | Lymphocyte | http://purl.org/sig/ont/fma/fma62863 |
| T24 | 1873-1878 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T25 | 1906-1914 | Body_part | denotes | Monocyte | http://purl.org/sig/ont/fma/fma62864 |
| T26 | 1928-1933 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T27 | 1965-1975 | Body_part | denotes | Eosinophil | http://purl.org/sig/ont/fma/fma62861 |
| T28 | 1989-1994 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T29 | 2024-2033 | Body_part | denotes | Basophile | http://purl.org/sig/ont/fma/fma62862 |
| T30 | 2047-2052 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T31 | 2096-2103 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T32 | 2519-2526 | Body_part | denotes | alanine | http://purl.org/sig/ont/fma/fma82749 |
| T33 | 2796-2801 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T34 | 2872-2877 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T35 | 2941-2948 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T36 | 2992-2999 | Body_part | denotes | alanine | http://purl.org/sig/ont/fma/fma82749 |
| T37 | 3080-3085 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T38 | 3135-3140 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T39 | 3191-3196 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T40 | 3215-3220 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T9 | 431-453 | Body_part | denotes | mediastinal lymph node | http://purl.obolibrary.org/obo/UBERON_0002524 |
| T10 | 443-453 | Body_part | denotes | lymph node | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T11 | 443-448 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T12 | 833-856 | Body_part | denotes | upper respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001557 |
| T13 | 839-856 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
| T14 | 923-929 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T15 | 1651-1657 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T16 | 1735-1740 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T17 | 3080-3085 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T18 | 3135-3140 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T19 | 3215-3220 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T74 | 86-94 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T75 | 155-163 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T76 | 155-159 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T77 | 201-209 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T78 | 201-205 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T79 | 315-323 | Disease | denotes | diabetes | http://purl.obolibrary.org/obo/MONDO_0005015 |
| T80 | 333-372 | Disease | denotes | hypertension, or cardiovascular disease | http://purl.obolibrary.org/obo/MONDO_0001302 |
| T81 | 333-345 | Disease | denotes | hypertension | http://purl.obolibrary.org/obo/MONDO_0005044 |
| T82 | 350-372 | Disease | denotes | cardiovascular disease | http://purl.obolibrary.org/obo/MONDO_0004995 |
| T83 | 411-423 | Disease | denotes | tuberculosis | http://purl.obolibrary.org/obo/MONDO_0018076 |
| T84 | 515-524 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T85 | 538-553 | Disease | denotes | avian influenza | http://purl.obolibrary.org/obo/MONDO_0018695 |
| T86 | 544-553 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T87 | 554-569 | Disease | denotes | virus infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T88 | 560-569 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T89 | 839-866 | Disease | denotes | respiratory tract infection | http://purl.obolibrary.org/obo/MONDO_0024355 |
| T90 | 857-866 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T91 | 918-929 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
| T92 | 1006-1018 | Disease | denotes | constipation | http://purl.obolibrary.org/obo/MONDO_0002203 |
| T93 | 1069-1078 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T94 | 1125-1133 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T95 | 1134-1143 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T96 | 1453-1461 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T97 | 1453-1457 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T98 | 1646-1657 | Disease | denotes | Sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
| T99 | 2255-2263 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T100 | 2255-2259 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T101 | 2306-2315 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T102 | 2333-2348 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T103 | 2339-2348 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T104 | 2760-2771 | Disease | denotes | lymphopenia | http://purl.obolibrary.org/obo/MONDO_0003783 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T32 | 45-46 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T33 | 237-239 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T34 | 443-453 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph node |
| T35 | 525-530 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T36 | 554-559 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T37 | 636-637 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T38 | 668-669 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T39 | 738-739 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T40 | 1328-1330 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T41 | 1336-1338 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T42 | 1351-1355 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | Male |
| T43 | 1351-1355 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | Male |
| T44 | 1356-1360 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | Male |
| T45 | 1356-1360 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | Male |
| T46 | 1361-1367 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | Female |
| T47 | 1368-1374 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | Female |
| T48 | 1375-1381 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | Female |
| T49 | 1403-1405 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T50 | 1492-1495 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 4 8 |
| T51 | 1735-1740 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T52 | 1741-1745 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T53 | 1759-1764 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T54 | 1816-1821 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T55 | 1873-1878 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T56 | 1906-1914 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | Monocyte |
| T57 | 1928-1933 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T58 | 1989-1994 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T59 | 2047-2052 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T60 | 2204-2206 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T61 | 2233-2235 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T62 | 2249-2253 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T63 | 2714-2719 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T64 | 2796-2801 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T65 | 2872-2877 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T66 | 3080-3085 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T67 | 3135-3140 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T68 | 3191-3196 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T69 | 3215-3220 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T5 | 535-537 | Chemical | denotes | H7 | http://purl.obolibrary.org/obo/CHEBI_83438 |
| T6 | 2096-2103 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T7 | 2121-2123 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T8 | 2130-2132 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T9 | 2159-2162 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
| T10 | 2212-2215 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
| T11 | 2463-2477 | Chemical | denotes | corticosteroid | http://purl.obolibrary.org/obo/CHEBI_50858 |
| T12 | 2496-2498 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T13 | 2519-2526 | Chemical | denotes | alanine | http://purl.obolibrary.org/obo/CHEBI_16449 |
| T14 | 2541-2544 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
| T15 | 2545-2554 | Chemical | denotes | aspartate | http://purl.obolibrary.org/obo/CHEBI_132943|http://purl.obolibrary.org/obo/CHEBI_29995|http://purl.obolibrary.org/obo/CHEBI_72314 |
| T18 | 2621-2631 | Chemical | denotes | antibiotic | http://purl.obolibrary.org/obo/CHEBI_33281 |
| T19 | 2664-2673 | Chemical | denotes | antiviral | http://purl.obolibrary.org/obo/CHEBI_22587 |
| T20 | 2941-2948 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T21 | 2992-2999 | Chemical | denotes | alanine | http://purl.obolibrary.org/obo/CHEBI_16449 |
| T22 | 3027-3036 | Chemical | denotes | aspartate | http://purl.obolibrary.org/obo/CHEBI_132943|http://purl.obolibrary.org/obo/CHEBI_29995|http://purl.obolibrary.org/obo/CHEBI_72314 |
| T25 | 3055-3058 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 2333-2348 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T21 | 333-345 | Phenotype | denotes | hypertension | http://purl.obolibrary.org/obo/HP_0000822 |
| T22 | 350-372 | Phenotype | denotes | cardiovascular disease | http://purl.obolibrary.org/obo/HP_0001626 |
| T23 | 638-643 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T24 | 652-658 | Phenotype | denotes | chills | http://purl.obolibrary.org/obo/HP_0025143 |
| T25 | 675-680 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T26 | 833-866 | Phenotype | denotes | upper respiratory tract infection | http://purl.obolibrary.org/obo/HP_0002788 |
| T27 | 903-908 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T28 | 918-929 | Phenotype | denotes | sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
| T29 | 953-960 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T30 | 1006-1018 | Phenotype | denotes | constipation | http://purl.obolibrary.org/obo/HP_0002019 |
| T31 | 1069-1078 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T32 | 1134-1143 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T33 | 1562-1567 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T34 | 1600-1605 | Phenotype | denotes | Cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T35 | 1622-1630 | Phenotype | denotes | Dyspnoea | http://purl.obolibrary.org/obo/HP_0002094 |
| T36 | 1646-1657 | Phenotype | denotes | Sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
| T37 | 1674-1681 | Phenotype | denotes | Fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T38 | 2306-2315 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T39 | 2760-2771 | Phenotype | denotes | lymphopenia | http://purl.obolibrary.org/obo/HP_0001888 |
| T40 | 2834-2846 | Phenotype | denotes | neutrophilia | http://purl.obolibrary.org/obo/HP_0011897 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T54 | 0-7 | Sentence | denotes | Results |
| T55 | 8-179 | Sentence | denotes | At presentation, all 55 patients had a history of epidemiological exposure to COVID-19, and 5 (9%) patients who discharged from hospital presented SARS-CoV-2 reactivation. |
| T56 | 180-249 | Sentence | denotes | The age range of the SARS-CoV-2 reactivated patients was 27–42 years. |
| T57 | 250-373 | Sentence | denotes | None of the reactivated patients had underlying diseases such as diabetes, chronic hypertension, or cardiovascular disease. |
| T58 | 374-462 | Sentence | denotes | One patient, however, had history of tuberculosis in the mediastinal lymph node in 2009. |
| T59 | 463-597 | Sentence | denotes | Additionally, all the reactivated patients excluded influenza virus and H7 avian influenza virus infection upon admission to hospital. |
| T60 | 598-691 | Sentence | denotes | Four of the 5 patients presented with a fever without chills, one had a high fever (39.3 °C). |
| T61 | 692-767 | Sentence | denotes | Patients’ body temperatures fluctuated within a range from 36.2 to 39.3 °C. |
| T62 | 768-811 | Sentence | denotes | One patient showed normal body temperature. |
| T63 | 812-972 | Sentence | denotes | Other symptoms of an upper respiratory tract infection were also observed: one patient had cough, one had sore throat, all patients reported fatigue (Table 1 ). |
| T64 | 973-1019 | Sentence | denotes | Additionally, one patient showed constipation. |
| T65 | 1020-1155 | Sentence | denotes | However, none of the 5 patients developed severe pneumonia, requiring mechanical ventilation, or died of COVID-19 pneumonia, as of Feb. |
| T66 | 1156-1165 | Sentence | denotes | 24, 2020. |
| T67 | 1166-1214 | Sentence | denotes | Table 1 Clinical and laboratory characteristics. |
| T68 | 1215-1289 | Sentence | denotes | Clinical characteristics Patient 1 Patient 2 Patient 3 Patient 4 Patient 5 |
| T69 | 1290-1312 | Sentence | denotes | Date of admission Jan. |
| T70 | 1313-1319 | Sentence | denotes | 3 Jan. |
| T71 | 1320-1327 | Sentence | denotes | 13 Jan. |
| T72 | 1328-1335 | Sentence | denotes | 27 Jan. |
| T73 | 1336-1343 | Sentence | denotes | 22 Jan. |
| T74 | 1344-1346 | Sentence | denotes | 20 |
| T75 | 1347-1381 | Sentence | denotes | Sex Male Male Female Female Female |
| T76 | 1382-1408 | Sentence | denotes | Age (years) 30 42 32 27 31 |
| T77 | 1409-1452 | Sentence | denotes | Epidemiological history Yes Yes Yes Yes Yes |
| T78 | 1453-1503 | Sentence | denotes | SARS-CoV-2 negative to positive (days) 4 8 17 15 9 |
| T79 | 1504-1542 | Sentence | denotes | Complications None None None None None |
| T80 | 1543-1561 | Sentence | denotes | Signs and symptoms |
| T81 | 1562-1599 | Sentence | denotes | Fever on admission Yes Yes Yes No Yes |
| T82 | 1600-1621 | Sentence | denotes | Cough No Yes No No No |
| T83 | 1622-1645 | Sentence | denotes | Dyspnoea No No No No No |
| T84 | 1646-1673 | Sentence | denotes | Sore throat No No Yes No No |
| T85 | 1674-1701 | Sentence | denotes | Fatigue Yes Yes Yes Yes Yes |
| T86 | 1702-1728 | Sentence | denotes | Laboratory characteristics |
| T87 | 1729-1791 | Sentence | denotes | White blood cell count (× 109 cells per L) 5.9 7.1 4.4 6.5 4.5 |
| T88 | 1792-1848 | Sentence | denotes | Neutrophil count (× 109 cells per L) 3.5 4.5 1.8 4.1 2.6 |
| T89 | 1849-1905 | Sentence | denotes | Lymphocyte count (× 109 cells per L) 1.7 1.3 1.7 1.7 1.4 |
| T90 | 1906-1964 | Sentence | denotes | Monocyte count (× 109 cells per L) 0.63 1.24 0.75 0.58 0.4 |
| T91 | 1965-2023 | Sentence | denotes | Eosinophil count (× 109 cells per L) 0.13 0.05 0.02 0.09 0 |
| T92 | 2024-2084 | Sentence | denotes | Basophile count (× 109 cells per L) 0.02 0.04 0.03 0.02 0.02 |
| T93 | 2085-2132 | Sentence | denotes | C-reactive protein (mg/L) 18.7 23.7 NA <0.50 NA |
| T94 | 2133-2187 | Sentence | denotes | Elevated ALT (>45 U/L) or AST (>35 U/L) No No No No No |
| T95 | 2188-2211 | Sentence | denotes | ALT (U/L) 40 16 11 9 10 |
| T96 | 2212-2235 | Sentence | denotes | AST(U/L) 32 19 20 13 22 |
| T97 | 2236-2290 | Sentence | denotes | Confirmatory test (SARS-CoV-2 PCR) Yes Yes Yes Yes Yes |
| T98 | 2291-2315 | Sentence | denotes | CT evidence of pneumonia |
| T99 | 2316-2368 | Sentence | denotes | Typical signs of viral infection Yes Yes Yes Yes Yes |
| T100 | 2369-2378 | Sentence | denotes | Treatment |
| T101 | 2379-2416 | Sentence | denotes | Antiviral therapy Yes Yes Yes Yes Yes |
| T102 | 2417-2455 | Sentence | denotes | Antibiotic therapy Yes Yes Yes Yes Yes |
| T103 | 2456-2495 | Sentence | denotes | Use of corticosteroid Yes Yes No No Yes |
| T104 | 2496-2514 | Sentence | denotes | NA=not applicable. |
| T105 | 2515-2540 | Sentence | denotes | ALT=alanine transaminase. |
| T106 | 2541-2568 | Sentence | denotes | AST=aspartate transaminase. |
| T107 | 2569-2692 | Sentence | denotes | All the 5 reactivated patients were given empirical antibiotic treatment and were administered antiviral therapy (Table 1). |
| T108 | 2693-2885 | Sentence | denotes | Data from laboratory tests showed that one patient had progressive lymphopenia (from 1.3 to 0.56 × 109 cells per L) and progressive elevated neutrophilia (from 4.5 to 18.28 × 109 cells per L). |
| T109 | 2886-2961 | Sentence | denotes | Two patients had elevated concentrations of C-reactive protein (> 18 mg/L). |
| T110 | 2962-3060 | Sentence | denotes | All the 5 patients had normal alanine aminotransferase (ALT) and aspartate aminotransferase (AST). |
| T111 | 3061-3094 | Sentence | denotes | All 5 patients had chest CT scan. |
| T112 | 3095-3207 | Sentence | denotes | All patients showed typical findings of chest CT images-multiple patchy ground-glass shadows in lungs (Fig. 1 ). |
| T113 | 3208-3248 | Sentence | denotes | Fig. 1 Chest CT scans of the 5 patients. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 165 | 32-40 | Species | denotes | patients | Tax:9606 |
| 166 | 107-115 | Species | denotes | patients | Tax:9606 |
| 167 | 155-165 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 168 | 201-211 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 169 | 224-232 | Species | denotes | patients | Tax:9606 |
| 170 | 274-282 | Species | denotes | patients | Tax:9606 |
| 171 | 378-385 | Species | denotes | patient | Tax:9606 |
| 172 | 497-505 | Species | denotes | patients | Tax:9606 |
| 173 | 515-530 | Species | denotes | influenza virus | Tax:11309 |
| 174 | 86-94 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 175 | 315-323 | Disease | denotes | diabetes | MESH:D003920 |
| 176 | 333-345 | Disease | denotes | hypertension | MESH:D006973 |
| 177 | 350-372 | Disease | denotes | cardiovascular disease | MESH:D002318 |
| 178 | 411-423 | Disease | denotes | tuberculosis | MESH:D014376 |
| 179 | 554-569 | Disease | denotes | virus infection | MESH:D001102 |
| 196 | 2085-2103 | Gene | denotes | C-reactive protein | Gene:1401 |
| 197 | 2159-2162 | Gene | denotes | AST | Gene:26503 |
| 198 | 2212-2215 | Gene | denotes | AST | Gene:26503 |
| 199 | 1240-1247 | Species | denotes | Patient | Tax:9606 |
| 200 | 1250-1257 | Species | denotes | Patient | Tax:9606 |
| 201 | 1260-1267 | Species | denotes | Patient | Tax:9606 |
| 202 | 1270-1277 | Species | denotes | Patient | Tax:9606 |
| 203 | 1280-1287 | Species | denotes | Patient | Tax:9606 |
| 204 | 1453-1463 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 205 | 2255-2265 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 206 | 1553-1567 | Disease | denotes | symptoms Fever | MESH:D051271 |
| 207 | 1600-1605 | Disease | denotes | Cough | MESH:D003371 |
| 208 | 1622-1630 | Disease | denotes | Dyspnoea | MESH:D004417 |
| 209 | 1674-1681 | Disease | denotes | Fatigue | MESH:D005221 |
| 210 | 2306-2315 | Disease | denotes | pneumonia | MESH:D011014 |
| 211 | 2333-2348 | Disease | denotes | viral infection | MESH:D001102 |
| 213 | 2541-2544 | Gene | denotes | AST | Gene:26503 |
| 231 | 612-620 | Species | denotes | patients | Tax:9606 |
| 232 | 692-700 | Species | denotes | Patients | Tax:9606 |
| 233 | 772-779 | Species | denotes | patient | Tax:9606 |
| 234 | 891-898 | Species | denotes | patient | Tax:9606 |
| 235 | 935-943 | Species | denotes | patients | Tax:9606 |
| 236 | 991-998 | Species | denotes | patient | Tax:9606 |
| 237 | 1043-1051 | Species | denotes | patients | Tax:9606 |
| 238 | 638-643 | Disease | denotes | fever | MESH:D005334 |
| 239 | 675-680 | Disease | denotes | fever | MESH:D005334 |
| 240 | 833-866 | Disease | denotes | upper respiratory tract infection | MESH:D012141 |
| 241 | 903-908 | Disease | denotes | cough | MESH:D003371 |
| 242 | 918-929 | Disease | denotes | sore throat | MESH:D010608 |
| 243 | 953-960 | Disease | denotes | fatigue | MESH:D005221 |
| 244 | 1006-1018 | Disease | denotes | constipation | MESH:D003248 |
| 245 | 1069-1078 | Disease | denotes | pneumonia | MESH:D011014 |
| 246 | 1117-1121 | Disease | denotes | died | MESH:D003643 |
| 247 | 1125-1143 | Disease | denotes | COVID-19 pneumonia | MESH:C000657245 |
| 249 | 3239-3247 | Species | denotes | patients | Tax:9606 |
| 262 | 2930-2948 | Gene | denotes | C-reactive protein | Gene:1401 |
| 263 | 2992-3016 | Gene | denotes | alanine aminotransferase | Gene:2875 |
| 264 | 3027-3053 | Gene | denotes | aspartate aminotransferase | Gene:26503 |
| 265 | 3055-3058 | Gene | denotes | AST | Gene:26503 |
| 266 | 2591-2599 | Species | denotes | patients | Tax:9606 |
| 267 | 2736-2743 | Species | denotes | patient | Tax:9606 |
| 268 | 2890-2898 | Species | denotes | patients | Tax:9606 |
| 269 | 2972-2980 | Species | denotes | patients | Tax:9606 |
| 270 | 3067-3075 | Species | denotes | patients | Tax:9606 |
| 271 | 3099-3107 | Species | denotes | patients | Tax:9606 |
| 272 | 2760-2771 | Disease | denotes | lymphopenia | MESH:D008231 |
| 273 | 2834-2846 | Disease | denotes | neutrophilia | MESH:C563010 |