PMC:7100515 / 33152-34044
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T279 | 6-13 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T280 | 72-78 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
| T281 | 195-203 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T282 | 329-336 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T283 | 379-386 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T14 | 72-78 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T314 | 207-215 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T315 | 222-230 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T316 | 277-281 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T317 | 316-324 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T318 | 366-374 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T319 | 568-576 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T320 | 581-589 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T321 | 621-625 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T322 | 630-638 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T323 | 710-718 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T324 | 725-733 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T325 | 801-819 | Disease | denotes | SARS-CoV infection | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T326 | 810-819 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T327 | 855-863 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T328 | 866-875 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T726 | 55-60 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T727 | 118-119 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T728 | 282-284 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T729 | 396-401 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T730 | 691-701 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activities |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T259 | 6-13 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T260 | 195-203 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T261 | 329-336 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T262 | 379-386 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T72 | 61-70 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | virulence |
| T73 | 61-70 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | virulence |
| T74 | 79-86 | http://purl.obolibrary.org/obo/GO_0009606 | denotes | tropism |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T244 | 0-179 | Sentence | denotes | CoV S protein is one of the key components determining virus virulence, tissue tropism and host range, and it is also a main target for neutralizing antibodies and vaccine design. |
| T245 | 180-408 | Sentence | denotes | Although the S proteins of SARS-CoV-2 and SARS-CoV are highly homologous, polyclonal rabbit anti-SARS S1 antibodies T62 did not bind to SARS-CoV-2 S protein well, and poorly neutralized SARS-CoV-2 S protein-mediated virus entry. |
| T246 | 409-522 | Sentence | denotes | Further analysis reveals that major immune-epitopes for T62 antibodies likely lie in the region of RBD (Fig. 4a). |
| T247 | 523-648 | Sentence | denotes | We further evaluated cross-neutralization of SARS-CoV and SARS-CoV-2 using convalescent sera from SARS and COVID-19 patients. |
| T248 | 649-892 | Sentence | denotes | We only saw moderate cross-neutralization activities between SARS-CoV-2 and SARS-CoV convalescent sera, suggesting that those previously recovered from SARS-CoV infection may not be fully protected against SARS-CoV-2 infection, and vice versa. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1391 | 377-378 | Gene | denotes | S | Gene:43740568 |
| 1392 | 327-328 | Gene | denotes | S | Gene:43740568 |
| 1393 | 193-194 | Gene | denotes | S | Gene:43740568 |
| 1394 | 4-5 | Gene | denotes | S | Gene:43740568 |
| 1395 | 0-3 | Species | denotes | CoV | Tax:11118 |
| 1396 | 207-217 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1397 | 222-230 | Species | denotes | SARS-CoV | Tax:694009 |
| 1398 | 316-326 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1399 | 366-376 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1400 | 568-576 | Species | denotes | SARS-CoV | Tax:694009 |
| 1401 | 581-591 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1402 | 639-647 | Species | denotes | patients | Tax:9606 |
| 1403 | 710-720 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1404 | 725-733 | Species | denotes | SARS-CoV | Tax:694009 |
| 1405 | 630-638 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 1406 | 801-819 | Disease | denotes | SARS-CoV infection | MESH:C000657245 |
| 1407 | 855-875 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |