PMC:7094172 / 29849-30853
Annnotations
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T496 | 0-8 | SP_9 | denotes | MERS-CoV |
| T495 | 29-34 | GO:0040007 | denotes | grown |
| T494 | 62-70 | SP_9 | denotes | MERS-CoV |
| T493 | 177-185 | CHEBI:75958;CHEBI:75958 | denotes | solution |
| T492 | 255-263 | CHEBI:75958;CHEBI:75958 | denotes | solution |
| T491 | 284-300 | CHEBI:62946;CHEBI:62946 | denotes | ammonium sulfate |
| T490 | 307-311 | CHEBI:26710;CHEBI:26710 | denotes | NaBr |
| T489 | 321-324 | CHEBI:53250;CHEBI:53250 | denotes | PEG |
| T488 | 401-409 | CHEBI:75958;CHEBI:75958 | denotes | solution |
| T487 | 411-419 | SP_9 | denotes | MERS-CoV |
| T486 | 479-487 | CHEBI:75958;CHEBI:75958 | denotes | solution |
| T485 | 508-516 | SP_9 | denotes | MERS-CoV |
| T484 | 535-542 | GO:1990524 | denotes | complex |
| T483 | 583-591 | SP_9 | denotes | MERS-CoV |
| T482 | 657-665 | CHEBI:75958;CHEBI:75958 | denotes | solution |
| T481 | 711-719 | SP_9 | denotes | MERS-CoV |
| T480 | 739-746 | GO:1990524 | denotes | complex |
| T479 | 914-922 | SP_9 | denotes | MERS-CoV |
| T478 | 932-939 | GO:0032991 | denotes | complex |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T144 | 169-176 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T99 | 11-14 | Disease | denotes | NTD | http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075 |
| T101 | 73-76 | Disease | denotes | NTD | http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075 |
| T103 | 519-522 | Disease | denotes | NTD | http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075 |
| T105 | 594-597 | Disease | denotes | NTD | http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075 |
| T107 | 722-725 | Disease | denotes | NTD | http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T222 | 167-168 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T223 | 199-203 | http://purl.obolibrary.org/obo/CLO_0007735 | denotes | mL–1 |
| T224 | 352-354 | http://purl.obolibrary.org/obo/CLO_0009141 | denotes | St |
| T225 | 352-354 | http://purl.obolibrary.org/obo/CLO_0050980 | denotes | St |
| T226 | 363-365 | http://purl.obolibrary.org/obo/CLO_0007815 | denotes | MO |
| T227 | 392-393 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T228 | 461-462 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T229 | 548-550 | http://purl.obolibrary.org/obo/CLO_0008285 | denotes | P1 |
| T230 | 639-640 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T231 | 682-684 | http://purl.obolibrary.org/obo/CLO_0008285 | denotes | P1 |
| T232 | 752-754 | http://purl.obolibrary.org/obo/CLO_0008285 | denotes | P1 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T265 | 169-176 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T266 | 177-185 | Chemical | denotes | solution | http://purl.obolibrary.org/obo/CHEBI_75958 |
| T267 | 255-263 | Chemical | denotes | solution | http://purl.obolibrary.org/obo/CHEBI_75958 |
| T268 | 284-300 | Chemical | denotes | ammonium sulfate | http://purl.obolibrary.org/obo/CHEBI_62946 |
| T269 | 284-292 | Chemical | denotes | ammonium | http://purl.obolibrary.org/obo/CHEBI_28938 |
| T270 | 293-300 | Chemical | denotes | sulfate | http://purl.obolibrary.org/obo/CHEBI_16189 |
| T271 | 307-311 | Chemical | denotes | NaBr | http://purl.obolibrary.org/obo/CHEBI_63004 |
| T272 | 321-324 | Chemical | denotes | PEG | http://purl.obolibrary.org/obo/CHEBI_46793 |
| T273 | 401-409 | Chemical | denotes | solution | http://purl.obolibrary.org/obo/CHEBI_75958 |
| T274 | 479-487 | Chemical | denotes | solution | http://purl.obolibrary.org/obo/CHEBI_75958 |
| T275 | 548-550 | Chemical | denotes | P1 | http://purl.obolibrary.org/obo/CHEBI_60949 |
| T276 | 657-665 | Chemical | denotes | solution | http://purl.obolibrary.org/obo/CHEBI_75958 |
| T277 | 682-684 | Chemical | denotes | P1 | http://purl.obolibrary.org/obo/CHEBI_60949 |
| T278 | 752-754 | Chemical | denotes | P1 | http://purl.obolibrary.org/obo/CHEBI_60949 |
| T279 | 801-806 | Chemical | denotes | Light | http://purl.obolibrary.org/obo/CHEBI_30212 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T229 | 0-166 | Sentence | denotes | MERS-CoV N-NTD crystals were grown as previously described:46 MERS-CoV N-NTD was crystallized at room temperature (∼25 °C) by the sitting-drop vapor-diffusion method. |
| T230 | 167-410 | Sentence | denotes | A protein solution (2 μL; 10 mg mL–1) was mixed with an equal volume of crystallization solution consisting of 75 mM ammonium sulfate, 2 mM NaBr, and 29% PEG 3350 (Sigma-Aldrich Corp., St. Louis, MO) and equilibrated against a 300 μL solution. |
| T231 | 411-507 | Sentence | denotes | MERS-CoV N-NTD:P3 co-crystals were obtained using a crystallization solution containing 2 mM P3. |
| T232 | 508-685 | Sentence | denotes | MERS-CoV N-NTD crystals in complex with P1 were obtained by soaking native MERS-CoV N-NTD crystals for 90 s at room temperature in a crystallization solution containing 2 mM P1. |
| T233 | 686-894 | Sentence | denotes | Diffraction datasets for MERS-CoV N-NTD alone and in complex with P1 were collected at beamline 13B1 of the Taiwan Light Source (TLS) of the National Synchrotron Research Center (NSRRC; Hsinchu City, Taiwan). |
| T234 | 895-1004 | Sentence | denotes | Diffraction of the MERS-CoV N-NTD:P3 complex was performed at the beamline SP44XU of SPring-8 (Hyogo, Japan). |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 470 | 199-203 | Gene | denotes | mL–1 | Gene:23961 |
| 471 | 970-988 | Gene | denotes | SP44XU of SPring-8 | |
| 472 | 0-8 | Species | denotes | MERS-CoV | Tax:1335626 |
| 473 | 62-70 | Species | denotes | MERS-CoV | Tax:1335626 |
| 474 | 411-419 | Species | denotes | MERS-CoV | Tax:1335626 |
| 475 | 508-516 | Species | denotes | MERS-CoV | Tax:1335626 |
| 476 | 583-591 | Species | denotes | MERS-CoV | Tax:1335626 |
| 477 | 711-719 | Species | denotes | MERS-CoV | Tax:1335626 |
| 478 | 914-922 | Species | denotes | MERS-CoV | Tax:1335626 |
| 479 | 284-300 | Chemical | denotes | ammonium sulfate | MESH:D000645 |
| 480 | 307-311 | Chemical | denotes | NaBr | |
| 481 | 321-324 | Chemical | denotes | PEG | |
| 482 | 426-428 | Chemical | denotes | P3 | |
| 483 | 504-506 | Chemical | denotes | P3 | |
| 484 | 923-928 | Chemical | denotes | N-NTD | |
| 485 | 929-931 | Chemical | denotes | P3 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32105468-26249685-61929525 | 59-61 | 26249685 | denotes | 46 |